RNA–Protein interactions for RNA: ENST00000357179.9

TOP3B-201, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 2,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-201ENST00000357179 CD58P19256 250 aa15.22■□□□□ 0.03
TOP3B-201ENST00000357179 PTPN7P35236 360 aa15.22■□□□□ 0.03
TOP3B-201ENST00000357179 EPHB1P54762 984 aa15.22■□□□□ 0.03
TOP3B-201ENST00000357179 KRT76Q01546 638 aa15.22■□□□□ 0.03
TOP3B-201ENST00000357179 MSS51Q4VC12 460 aa15.22■□□□□ 0.03
TOP3B-201ENST00000357179 LRRC38Q5VT99 294 aa15.22■□□□□ 0.03
TOP3B-201ENST00000357179 ISLR2Q6UXK2 745 aa15.22■□□□□ 0.03
TOP3B-201ENST00000357179 KBTBD6Q86V97 674 aa15.22■□□□□ 0.03
TOP3B-201ENST00000357179 ACTRT2Q8TDY3 377 aa15.22■□□□□ 0.03
TOP3B-201ENST00000357179 CLEC4DQ8WXI8 215 aa15.22■□□□□ 0.03
TOP3B-201ENST00000357179 PRPF18Q99633 342 aaKnown RBP15.22■□□□□ 0.03
TOP3B-201ENST00000357179 SH2D3AQ9BRG2 576 aa15.22■□□□□ 0.03
TOP3B-201ENST00000357179 PLGRKTQ9HBL7 147 aa15.22■□□□□ 0.03
TOP3B-201ENST00000357179 IP6K2Q9UHH9 426 aa15.22■□□□□ 0.03
TOP3B-201ENST00000357179 CDH22Q9UJ99 828 aa15.22■□□□□ 0.03
TOP3B-201ENST00000357179 ZNF180Q9UJW8 692 aa15.22■□□□□ 0.03
TOP3B-201ENST00000357179 POMPQ9Y244 141 aa15.22■□□□□ 0.03
TOP3B-201ENST00000357179 SDR42E2A6NKP2 422 aa15.21■□□□□ 0.03
TOP3B-201ENST00000357179 DKC1O60832 514 aaKnown RBP eCLIP15.21■□□□□ 0.03
TOP3B-201ENST00000357179 HMGB2P26583 209 aaKnown RBP15.21■□□□□ 0.03
TOP3B-201ENST00000357179 ATG16L1Q676U5 607 aa15.21■□□□□ 0.03
TOP3B-201ENST00000357179 LLGL2Q6P1M3 1020 aa15.21■□□□□ 0.03
TOP3B-201ENST00000357179 PAOXQ6QHF9 649 aa15.21■□□□□ 0.03
TOP3B-201ENST00000357179 CCDC80Q76M96 950 aa15.21■□□□□ 0.03
TOP3B-201ENST00000357179 NLGN1Q8N2Q7 840 aa15.21■□□□□ 0.03
TOP3B-201ENST00000357179 FEZF2Q8TBJ5 459 aa15.21■□□□□ 0.03
TOP3B-201ENST00000357179 BIRC8Q96P09 236 aa15.21■□□□□ 0.03
TOP3B-201ENST00000357179 C11orf70Q9BRQ4 267 aa15.21■□□□□ 0.03
TOP3B-201ENST00000357179 TMOD2Q9NZR1 351 aa15.21■□□□□ 0.03
TOP3B-201ENST00000357179 TMED5Q9Y3A6 229 aa15.21■□□□□ 0.03
TOP3B-201ENST00000357179 HTR3EA5X5Y0 456 aa15.21■□□□□ 0.02
TOP3B-201ENST00000357179 CRTAMO95727 393 aa15.21■□□□□ 0.02
TOP3B-201ENST00000357179 ACO1P21399 889 aaKnown RBP15.21■□□□□ 0.02
TOP3B-201ENST00000357179 DSG3P32926 999 aa15.21■□□□□ 0.02
TOP3B-201ENST00000357179 GAD2Q05329 585 aa15.21■□□□□ 0.02
TOP3B-201ENST00000357179 PTK7Q13308 1070 aa15.21■□□□□ 0.02
TOP3B-201ENST00000357179 ZACNQ401N2 412 aa15.21■□□□□ 0.02
TOP3B-201ENST00000357179 TEX44Q53QW1 395 aa15.21■□□□□ 0.02
TOP3B-201ENST00000357179 FNBP1LQ5T0N5 605 aa15.21■□□□□ 0.02
TOP3B-201ENST00000357179 CES4AQ5XG92 561 aa15.21■□□□□ 0.02
TOP3B-201ENST00000357179 C17orf50Q8WW18 174 aa15.21■□□□□ 0.02
TOP3B-201ENST00000357179 MPHOSPH6Q99547 160 aaKnown RBP15.21■□□□□ 0.02
TOP3B-201ENST00000357179 SENP7Q9BQF6 1050 aa15.21■□□□□ 0.02
TOP3B-201ENST00000357179 KIFC3Q9BVG8 833 aa15.21■□□□□ 0.02
TOP3B-201ENST00000357179 PCDH9Q9HC56 1237 aa15.21■□□□□ 0.02
TOP3B-201ENST00000357179 PARVAQ9NVD7 372 aa15.21■□□□□ 0.02
TOP3B-201ENST00000357179 FBXO28Q9NVF7 368 aa15.21■□□□□ 0.02
TOP3B-201ENST00000357179 RSL24D1Q9UHA3 163 aaKnown RBP15.21■□□□□ 0.02
TOP3B-201ENST00000357179 APPL1Q9UKG1 709 aa15.21■□□□□ 0.02
TOP3B-201ENST00000357179 EFR3BQ9Y2G0 817 aa15.21■□□□□ 0.02
TOP3B-201ENST00000357179 AP4B1Q9Y6B7 739 aa15.21■□□□□ 0.02
TOP3B-201ENST00000357179 E7ESA3 106 aa15.2■□□□□ 0.02
TOP3B-201ENST00000357179 TLR3O15455 904 aaKnown RBP15.2■□□□□ 0.02
TOP3B-201ENST00000357179 SRGAP2CP0DJJ0 459 aa15.2■□□□□ 0.02
TOP3B-201ENST00000357179 SRGAP2BP0DMP2 458 aa15.2■□□□□ 0.02
TOP3B-201ENST00000357179 CAP2P40123 477 aa15.2■□□□□ 0.02
TOP3B-201ENST00000357179 TMPRSS15P98073 1019 aa15.2■□□□□ 0.02
TOP3B-201ENST00000357179 PFKPQ01813 784 aa15.2■□□□□ 0.02
TOP3B-201ENST00000357179 RELAQ04206 551 aa15.2■□□□□ 0.02
TOP3B-201ENST00000357179 PSMD6Q15008 389 aa15.2■□□□□ 0.02
TOP3B-201ENST00000357179 OASLQ15646 514 aaKnown RBP15.2■□□□□ 0.02
TOP3B-201ENST00000357179 CNGA3Q16281 694 aa15.2■□□□□ 0.02
TOP3B-201ENST00000357179 PLA2G4FQ68DD2 849 aa15.2■□□□□ 0.02
TOP3B-201ENST00000357179 FBXO36Q8NEA4 188 aa15.2■□□□□ 0.02
TOP3B-201ENST00000357179 FAM151AQ8WW52 585 aa15.2■□□□□ 0.02
TOP3B-201ENST00000357179 ZNF516Q92618 1163 aa15.2■□□□□ 0.02
TOP3B-201ENST00000357179 USP6NLQ92738 828 aa15.2■□□□□ 0.02
TOP3B-201ENST00000357179 E2F7Q96AV8 911 aa15.2■□□□□ 0.02
TOP3B-201ENST00000357179 VPS50Q96JG6 964 aa15.2■□□□□ 0.02
TOP3B-201ENST00000357179 RILPQ96NA2 401 aa15.2■□□□□ 0.02
TOP3B-201ENST00000357179 SLITRK1Q96PX8 696 aa15.2■□□□□ 0.02
TOP3B-201ENST00000357179 C6orf203Q9P0P8 240 aaPredicted RBP15.2■□□□□ 0.02
TOP3B-201ENST00000357179 CNTN6Q9UQ52 1028 aa15.2■□□□□ 0.02
TOP3B-201ENST00000357179 HBS1LQ9Y450 684 aaKnown RBP15.2■□□□□ 0.02
TOP3B-201ENST00000357179 SNCAIPQ9Y6H5 919 aa15.2■□□□□ 0.02
TOP3B-201ENST00000357179 HDAC4P56524 1084 aa15.2■□□□□ 0.02
TOP3B-201ENST00000357179 TBC1D10BQ4KMP7 808 aaPredicted RBP15.2■□□□□ 0.02
TOP3B-201ENST00000357179 POTEHQ6S545 545 aa15.2■□□□□ 0.02
TOP3B-201ENST00000357179 CDHR3Q6ZTQ4 885 aa15.2■□□□□ 0.02
TOP3B-201ENST00000357179 PCGF5Q86SE9 256 aa15.2■□□□□ 0.02
TOP3B-201ENST00000357179 HIPK4Q8NE63 616 aa15.2■□□□□ 0.02
TOP3B-201ENST00000357179 BSNDQ8WZ55 320 aa15.2■□□□□ 0.02
TOP3B-201ENST00000357179 NKD2Q969F2 451 aaPredicted RBP15.2■□□□□ 0.02
TOP3B-201ENST00000357179 CCDC124Q96CT7 223 aaKnown RBP15.2■□□□□ 0.02
TOP3B-201ENST00000357179 SRPK1Q96SB4 655 aaKnown RBP15.2■□□□□ 0.02
TOP3B-201ENST00000357179 HNRNPABQ99729 332 aaKnown RBP15.2■□□□□ 0.02
TOP3B-201ENST00000357179 MECRQ9BV79 373 aa15.2■□□□□ 0.02
TOP3B-201ENST00000357179 SIRPGQ9P1W8 387 aa15.2■□□□□ 0.02
TOP3B-201ENST00000357179 H0YCG3 227 aa15.19■□□□□ 0.02
TOP3B-201ENST00000357179 NFIBO00712 420 aa15.19■□□□□ 0.02
TOP3B-201ENST00000357179 ITM2AO43736 263 aa15.19■□□□□ 0.02
TOP3B-201ENST00000357179 EXTL3O43909 919 aa15.19■□□□□ 0.02
TOP3B-201ENST00000357179 HLA-DRAP01903 254 aa15.19■□□□□ 0.02
TOP3B-201ENST00000357179 KRT10P13645 584 aa15.19■□□□□ 0.02
TOP3B-201ENST00000357179 HALP42357 657 aa15.19■□□□□ 0.02
TOP3B-201ENST00000357179 RAB15P59190 212 aa15.19■□□□□ 0.02
TOP3B-201ENST00000357179 IYDQ6PHW0 289 aa15.19■□□□□ 0.02
TOP3B-201ENST00000357179 RHPN2Q8IUC4 686 aa15.19■□□□□ 0.02
TOP3B-201ENST00000357179 CRLF3Q8IUI8 442 aa15.19■□□□□ 0.02
TOP3B-201ENST00000357179 PQLC1Q8N2U9 271 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms