RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 APOC4-APOC2K7ER74 178 aa18.47■□□□□ 0.55
APP-202ENST00000348990 APOC2P02655 101 aa18.47■□□□□ 0.55
APP-202ENST00000348990 RAP1GAPP47736 663 aa18.47■□□□□ 0.55
APP-202ENST00000348990 MRPS5P82675 430 aaKnown RBP18.47■□□□□ 0.55
APP-202ENST00000348990 TAP1Q03518 808 aa18.47■□□□□ 0.55
APP-202ENST00000348990 CNGA3Q16281 694 aa18.47■□□□□ 0.55
APP-202ENST00000348990 CCDC142Q17RM4 750 aa18.47■□□□□ 0.55
APP-202ENST00000348990 PTPN20Q4JDL3 420 aa18.47■□□□□ 0.55
APP-202ENST00000348990 PPP6R3Q5H9R7 873 aaPredicted RBP18.47■□□□□ 0.55
APP-202ENST00000348990 CES4AQ5XG92 561 aa18.47■□□□□ 0.55
APP-202ENST00000348990 THNSL1Q8IYQ7 743 aa18.47■□□□□ 0.55
APP-202ENST00000348990 GALNT4Q8N4A0 578 aa18.47■□□□□ 0.55
APP-202ENST00000348990 TTLL6Q8N841 843 aa18.47■□□□□ 0.55
APP-202ENST00000348990 CCDC106Q9BWC9 280 aa18.47■□□□□ 0.55
APP-202ENST00000348990 TMEM39BQ9GZU3 492 aa18.47■□□□□ 0.55
APP-202ENST00000348990 GPAMQ9HCL2 828 aa18.47■□□□□ 0.55
APP-202ENST00000348990 LMCD1Q9NZU5 365 aa18.47■□□□□ 0.55
APP-202ENST00000348990 TEX264Q9Y6I9 313 aa18.47■□□□□ 0.55
APP-202ENST00000348990 ITM2AO43736 263 aa18.47■□□□□ 0.55
APP-202ENST00000348990 CLPTM1O96005 669 aa18.47■□□□□ 0.55
APP-202ENST00000348990 CHN2P52757 468 aa18.47■□□□□ 0.55
APP-202ENST00000348990 KIAA0319LQ8IZA0 1049 aa18.47■□□□□ 0.55
APP-202ENST00000348990 PDCD2LQ9BRP1 358 aa18.47■□□□□ 0.55
APP-202ENST00000348990 NTPCRQ9BSD7 190 aaKnown RBP18.47■□□□□ 0.55
APP-202ENST00000348990 GRIP2Q9C0E4 1043 aa18.47■□□□□ 0.55
APP-202ENST00000348990 THAP1Q9NVV9 213 aa18.47■□□□□ 0.55
APP-202ENST00000348990 POLIQ9UNA4 740 aa18.47■□□□□ 0.55
APP-202ENST00000348990 BPGMP07738 259 aa18.46■□□□□ 0.55
APP-202ENST00000348990 CSH1P0DML2 217 aa18.46■□□□□ 0.55
APP-202ENST00000348990 CSH2P0DML3 217 aa18.46■□□□□ 0.55
APP-202ENST00000348990 TNFSF9P41273 254 aa18.46■□□□□ 0.55
APP-202ENST00000348990 LSAMPQ13449 338 aa18.46■□□□□ 0.55
APP-202ENST00000348990 FAM102AQ5T9C2 384 aaPredicted RBP18.46■□□□□ 0.55
APP-202ENST00000348990 TMEM174Q8WUU8 243 aa18.46■□□□□ 0.55
APP-202ENST00000348990 CGRRF1Q99675 332 aa18.46■□□□□ 0.55
APP-202ENST00000348990 KLC2Q9H0B6 622 aa18.46■□□□□ 0.55
APP-202ENST00000348990 C17orf75Q9HAS0 396 aa18.46■□□□□ 0.55
APP-202ENST00000348990 MAN1C1Q9NR34 630 aa18.46■□□□□ 0.55
APP-202ENST00000348990 USP18Q9UMW8 372 aa18.46■□□□□ 0.55
APP-202ENST00000348990 INPP5FQ9Y2H2 1132 aa18.46■□□□□ 0.55
APP-202ENST00000348990 C15orf38-AP3S2A0A0A6YYH1 394 aa18.46■□□□□ 0.55
APP-202ENST00000348990 AIM2O14862 343 aa18.46■□□□□ 0.55
APP-202ENST00000348990 DCXO43602 365 aa18.46■□□□□ 0.55
APP-202ENST00000348990 SPAG6O75602 509 aa18.46■□□□□ 0.55
APP-202ENST00000348990 YWHAZP63104 245 aaKnown RBP18.46■□□□□ 0.55
APP-202ENST00000348990 TBL3Q12788 808 aaKnown RBP18.46■□□□□ 0.55
APP-202ENST00000348990 ZNF699Q32M78 642 aa18.46■□□□□ 0.55
APP-202ENST00000348990 ARPINQ7Z6K5 226 aa18.46■□□□□ 0.55
APP-202ENST00000348990 PIWIL2Q8TC59 973 aaKnown RBP18.46■□□□□ 0.55
APP-202ENST00000348990 SNRNP27Q8WVK2 155 aaKnown RBP18.46■□□□□ 0.55
APP-202ENST00000348990 PNPOQ9NVS9 261 aa18.46■□□□□ 0.55
APP-202ENST00000348990 KLHL2O95198 593 aa18.45■□□□□ 0.54
APP-202ENST00000348990 PSAPP07602 524 aa18.45■□□□□ 0.54
APP-202ENST00000348990 PMLP29590 882 aa18.45■□□□□ 0.54
APP-202ENST00000348990 GRIA2P42262 883 aa18.45■□□□□ 0.54
APP-202ENST00000348990 BAATQ14032 418 aaPredicted RBP18.45■□□□□ 0.54
APP-202ENST00000348990 SLFN12LQ6IEE8 588 aa18.45■□□□□ 0.54
APP-202ENST00000348990 CDR2LQ86X02 465 aaPredicted RBP18.45■□□□□ 0.54
APP-202ENST00000348990 ATXN7L3BQ96GX2 97 aa18.45■□□□□ 0.54
APP-202ENST00000348990 NGRNQ9NPE2 291 aaKnown RBP18.45■□□□□ 0.54
APP-202ENST00000348990 E9PBE3 544 aa18.45■□□□□ 0.54
APP-202ENST00000348990 H0YCG3 227 aa18.45■□□□□ 0.54
APP-202ENST00000348990 KLHL41O60662 606 aa18.45■□□□□ 0.54
APP-202ENST00000348990 RBL1P28749 1068 aa18.45■□□□□ 0.54
APP-202ENST00000348990 SLC1A6P48664 564 aa18.45■□□□□ 0.54
APP-202ENST00000348990 EMC2Q15006 297 aa18.45■□□□□ 0.54
APP-202ENST00000348990 ANGEL2Q5VTE6 544 aaKnown RBP18.45■□□□□ 0.54
APP-202ENST00000348990 CCDC60Q8IWA6 550 aaPredicted RBP18.45■□□□□ 0.54
APP-202ENST00000348990 WDTC1Q8N5D0 677 aa18.45■□□□□ 0.54
APP-202ENST00000348990 RNF148Q8N7C7 305 aa18.45■□□□□ 0.54
APP-202ENST00000348990 CLEC4DQ8WXI8 215 aa18.45■□□□□ 0.54
APP-202ENST00000348990 ATP2A3Q93084 1043 aa18.45■□□□□ 0.54
APP-202ENST00000348990 ADPGKQ9BRR6 497 aa18.45■□□□□ 0.54
APP-202ENST00000348990 CHCHD3Q9NX63 227 aaKnown RBP18.45■□□□□ 0.54
APP-202ENST00000348990 NFASCO94856 1347 aa18.45■□□□□ 0.54
APP-202ENST00000348990 KLF11O14901 512 aa18.45■□□□□ 0.54
APP-202ENST00000348990 BUD23O43709 281 aaKnown RBP18.45■□□□□ 0.54
APP-202ENST00000348990 CDH8P55286 799 aa18.45■□□□□ 0.54
APP-202ENST00000348990 BCAR1P56945 870 aa18.45■□□□□ 0.54
APP-202ENST00000348990 TBCCQ15814 346 aa18.45■□□□□ 0.54
APP-202ENST00000348990 N4BP2L1Q5TBK1 243 aaPredicted RBP18.45■□□□□ 0.54
APP-202ENST00000348990 MAP3K21Q5TCX8 1036 aa18.45■□□□□ 0.54
APP-202ENST00000348990 SH3PXD2AQ5TCZ1 1133 aa18.45■□□□□ 0.54
APP-202ENST00000348990 ARFGAP1Q8N6T3 406 aa18.45■□□□□ 0.54
APP-202ENST00000348990 LRGUKQ96M69 825 aa18.45■□□□□ 0.54
APP-202ENST00000348990 TXNDC16Q9P2K2 825 aa18.45■□□□□ 0.54
APP-202ENST00000348990 SLC17A6Q9P2U8 582 aa18.45■□□□□ 0.54
APP-202ENST00000348990 MYOCOSA0A1B0GUC4 107 aa18.44■□□□□ 0.54
APP-202ENST00000348990 RFPL1O75677 317 aa18.44■□□□□ 0.54
APP-202ENST00000348990 LDHAP00338 332 aaKnown RBP18.44■□□□□ 0.54
APP-202ENST00000348990 CRADDP78560 199 aa18.44■□□□□ 0.54
APP-202ENST00000348990 SLC25A11Q02978 314 aaKnown RBP18.44■□□□□ 0.54
APP-202ENST00000348990 SH2D4BQ5SQS7 431 aa18.44■□□□□ 0.54
APP-202ENST00000348990 AAGABQ6PD74 315 aa18.44■□□□□ 0.54
APP-202ENST00000348990 NIPA1Q7RTP0 329 aa18.44■□□□□ 0.54
APP-202ENST00000348990 LCA5Q86VQ0 697 aa18.44■□□□□ 0.54
APP-202ENST00000348990 PRPF31Q8WWY3 499 aaKnown RBP18.44■□□□□ 0.54
APP-202ENST00000348990 NIF3L1Q9GZT8 377 aa18.44■□□□□ 0.54
APP-202ENST00000348990 HAPLN2Q9GZV7 340 aa18.44■□□□□ 0.54
APP-202ENST00000348990 RSAD1Q9HA92 442 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms