RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 CLEC20AQ6ZU45 233 aa20.52■□□□□ 0.87
ITGA4-202ENST00000339307 NUDT18Q6ZVK8 323 aa20.52■□□□□ 0.87
ITGA4-202ENST00000339307 GUF1Q8N442 669 aaKnown RBP20.52■□□□□ 0.87
ITGA4-202ENST00000339307 RLN3Q8WXF3 142 aa20.52■□□□□ 0.87
ITGA4-202ENST00000339307 HEXIM2Q96MH2 286 aaKnown RBP20.52■□□□□ 0.87
ITGA4-202ENST00000339307 HNRNPABQ99729 332 aaKnown RBP20.52■□□□□ 0.87
ITGA4-202ENST00000339307 NUDT5Q9UKK9 219 aa20.52■□□□□ 0.87
ITGA4-202ENST00000339307 FAM237AA0A1B0GTK4 181 aa20.51■□□□□ 0.87
ITGA4-202ENST00000339307 A0A1W2PQ27 194 aa20.51■□□□□ 0.87
ITGA4-202ENST00000339307 A0A1W2PQ64 194 aa20.51■□□□□ 0.87
ITGA4-202ENST00000339307 A0A1W2PQD8 194 aa20.51■□□□□ 0.87
ITGA4-202ENST00000339307 FAM92AA1XBS5 289 aa20.51■□□□□ 0.87
ITGA4-202ENST00000339307 NEDD8-MDP1E9PL57 170 aa20.51■□□□□ 0.87
ITGA4-202ENST00000339307 TULP3O75386 442 aa20.51■□□□□ 0.87
ITGA4-202ENST00000339307 ADRB1P08588 477 aa20.51■□□□□ 0.87
ITGA4-202ENST00000339307 BCKDHBP21953 392 aa20.51■□□□□ 0.87
ITGA4-202ENST00000339307 C10orf76Q5T2E6 689 aa20.51■□□□□ 0.87
ITGA4-202ENST00000339307 TPGS1Q6ZTW0 290 aa20.51■□□□□ 0.87
ITGA4-202ENST00000339307 RASSF3Q86WH2 238 aa20.51■□□□□ 0.87
ITGA4-202ENST00000339307 SMYD4Q8IYR2 804 aaPredicted RBP20.51■□□□□ 0.87
ITGA4-202ENST00000339307 TMEM8AQ9HCN3 771 aa20.51■□□□□ 0.87
ITGA4-202ENST00000339307 A0A1W2PQH9 124 aa20.5■□□□□ 0.87
ITGA4-202ENST00000339307 TCRBV21S2A2A0A5A6 115 aa20.5■□□□□ 0.87
ITGA4-202ENST00000339307 BCLAF3A2AJT9 711 aaKnown RBP20.5■□□□□ 0.87
ITGA4-202ENST00000339307 RARGP13631 454 aa20.5■□□□□ 0.87
ITGA4-202ENST00000339307 HNRNPLP14866 589 aaKnown RBP eCLIP20.5■□□□□ 0.87
ITGA4-202ENST00000339307 WASP42768 502 aa20.5■□□□□ 0.87
ITGA4-202ENST00000339307 KIR2DL1P43626 348 aaPredicted RBP20.5■□□□□ 0.87
ITGA4-202ENST00000339307 LIMK1P53667 647 aa20.5■□□□□ 0.87
ITGA4-202ENST00000339307 INCA1Q0VD86 236 aa20.5■□□□□ 0.87
ITGA4-202ENST00000339307 NFIL3Q16649 462 aa20.5■□□□□ 0.87
ITGA4-202ENST00000339307 HSF5Q4G112 596 aaPredicted RBP20.5■□□□□ 0.87
ITGA4-202ENST00000339307 C10orf120Q5SQS8 335 aa20.5■□□□□ 0.87
ITGA4-202ENST00000339307 KRT39Q6A163 491 aa20.5■□□□□ 0.87
ITGA4-202ENST00000339307 CYP2U1Q7Z449 544 aa20.5■□□□□ 0.87
ITGA4-202ENST00000339307 ZNF513Q8N8E2 541 aaPredicted RBP20.5■□□□□ 0.87
ITGA4-202ENST00000339307 WHAMMQ8TF30 809 aa20.5■□□□□ 0.87
ITGA4-202ENST00000339307 SPACA7Q96KW9 195 aa20.5■□□□□ 0.87
ITGA4-202ENST00000339307 EDEM2Q9BV94 578 aa20.5■□□□□ 0.87
ITGA4-202ENST00000339307 BBS2Q9BXC9 721 aa20.5■□□□□ 0.87
ITGA4-202ENST00000339307 KLF16Q9BXK1 252 aaPredicted RBP20.5■□□□□ 0.87
ITGA4-202ENST00000339307 DNAJC17Q9NVM6 304 aaKnown RBP20.5■□□□□ 0.87
ITGA4-202ENST00000339307 NAGPAQ9UK23 515 aa20.5■□□□□ 0.87
ITGA4-202ENST00000339307 SCML2Q9UQR0 700 aa20.5■□□□□ 0.87
ITGA4-202ENST00000339307 PCDHA5Q9Y5H7 936 aa20.5■□□□□ 0.87
ITGA4-202ENST00000339307 NCOR2Q9Y618 2525 aa20.49■□□□□ 0.87
ITGA4-202ENST00000339307 SPTBN2O15020 2390 aa20.49■□□□□ 0.87
ITGA4-202ENST00000339307 GOLGA6L4A6NEF3 574 aa20.49■□□□□ 0.87
ITGA4-202ENST00000339307 MDM4O15151 490 aa20.49■□□□□ 0.87
ITGA4-202ENST00000339307 HOXC11O43248 304 aaPredicted RBP20.49■□□□□ 0.87
ITGA4-202ENST00000339307 PMS2CLQ68D20 193 aa20.49■□□□□ 0.87
ITGA4-202ENST00000339307 GRAMD4Q6IC98 578 aa20.49■□□□□ 0.87
ITGA4-202ENST00000339307 HTR3DQ70Z44 454 aa20.49■□□□□ 0.87
ITGA4-202ENST00000339307 ARMCX6Q7L4S7 300 aa20.49■□□□□ 0.87
ITGA4-202ENST00000339307 PIGKQ92643 395 aa20.49■□□□□ 0.87
ITGA4-202ENST00000339307 BHMTQ93088 406 aa20.49■□□□□ 0.87
ITGA4-202ENST00000339307 ERLEC1Q96DZ1 483 aa20.49■□□□□ 0.87
ITGA4-202ENST00000339307 XPO6Q96QU8 1125 aaKnown RBP20.49■□□□□ 0.87
ITGA4-202ENST00000339307 OSER1Q9NX31 292 aa20.49■□□□□ 0.87
ITGA4-202ENST00000339307 A0A0A0MRY4 1105 aa20.48■□□□□ 0.87
ITGA4-202ENST00000339307 HHLA1C9JL84 531 aa20.48■□□□□ 0.87
ITGA4-202ENST00000339307 KHNYNO15037 678 aaKnown RBP20.48■□□□□ 0.87
ITGA4-202ENST00000339307 TRIM24O15164 1050 aa20.48■□□□□ 0.87
ITGA4-202ENST00000339307 CETN3O15182 167 aa20.48■□□□□ 0.87
ITGA4-202ENST00000339307 CILPO75339 1184 aa20.48■□□□□ 0.87
ITGA4-202ENST00000339307 EPB41P11171 864 aaKnown RBP20.48■□□□□ 0.87
ITGA4-202ENST00000339307 PNOCQ13519 176 aa20.48■□□□□ 0.87
ITGA4-202ENST00000339307 PPP1R26Q5T8A7 1209 aaPredicted RBP20.48■□□□□ 0.87
ITGA4-202ENST00000339307 TCERG1LQ5VWI1 586 aa20.48■□□□□ 0.87
ITGA4-202ENST00000339307 TRMT11Q7Z4G4 463 aaKnown RBP20.48■□□□□ 0.87
ITGA4-202ENST00000339307 MIB1Q86YT6 1006 aa20.48■□□□□ 0.87
ITGA4-202ENST00000339307 ETFBKMTQ8IXQ9 262 aa20.48■□□□□ 0.87
ITGA4-202ENST00000339307 NMUR1Q9HB89 426 aa20.48■□□□□ 0.87
ITGA4-202ENST00000339307 DNMT3LQ9UJW3 386 aa20.48■□□□□ 0.87
ITGA4-202ENST00000339307 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.47■□□□□ 0.87
ITGA4-202ENST00000339307 ZBTB24O43167 697 aaPredicted RBP20.47■□□□□ 0.87
ITGA4-202ENST00000339307 STX10O60499 249 aa20.47■□□□□ 0.87
ITGA4-202ENST00000339307 ADAM23O75077 832 aa20.47■□□□□ 0.87
ITGA4-202ENST00000339307 RALAP11233 206 aa20.47■□□□□ 0.87
ITGA4-202ENST00000339307 TYRP14679 529 aa20.47■□□□□ 0.87
ITGA4-202ENST00000339307 GTF2H1P32780 548 aa20.47■□□□□ 0.87
ITGA4-202ENST00000339307 MXI1P50539 228 aa20.47■□□□□ 0.87
ITGA4-202ENST00000339307 BECN1Q14457 450 aa20.47■□□□□ 0.87
ITGA4-202ENST00000339307 DCAF17Q5H9S7 520 aaPredicted RBP20.47■□□□□ 0.87
ITGA4-202ENST00000339307 SDE2Q6IQ49 451 aa20.47■□□□□ 0.87
ITGA4-202ENST00000339307 LPCAT2Q7L5N7 544 aa20.47■□□□□ 0.87
ITGA4-202ENST00000339307 TADA2BQ86TJ2 420 aa20.47■□□□□ 0.87
ITGA4-202ENST00000339307 TMEFF1Q8IYR6 380 aa20.47■□□□□ 0.87
ITGA4-202ENST00000339307 FRMD1Q8N878 549 aa20.47■□□□□ 0.87
ITGA4-202ENST00000339307 TERB1Q8NA31 727 aa20.47■□□□□ 0.87
ITGA4-202ENST00000339307 SEMA4DQ92854 862 aa20.47■□□□□ 0.87
ITGA4-202ENST00000339307 DUSP16Q9BY84 665 aa20.47■□□□□ 0.87
ITGA4-202ENST00000339307 CYLDQ9NQC7 956 aa20.47■□□□□ 0.87
ITGA4-202ENST00000339307 THADAQ6YHU6 1953 aa20.47■□□□□ 0.87
ITGA4-202ENST00000339307 ABCA7Q8IZY2 2146 aa20.46■□□□□ 0.87
ITGA4-202ENST00000339307 C4orf47A7E2U8 309 aa20.46■□□□□ 0.87
ITGA4-202ENST00000339307 HMBSP08397 361 aa20.46■□□□□ 0.87
ITGA4-202ENST00000339307 PLA2G4AP47712 749 aa20.46■□□□□ 0.87
ITGA4-202ENST00000339307 BYSLQ13895 437 aaKnown RBP20.46■□□□□ 0.87
ITGA4-202ENST00000339307 EDRF1Q3B7T1 1238 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms