RNA–Protein interactions for RNA: YPL104W

MSD1, Transcript of Mitochondrial aspartyl-tRNA synthetase, yeastyeast

Gene MSD1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSD1YPL104W KTI11Q3E840 82 aa2.19□□□□□ -2.06
MSD1YPL104W YOL013W-AP0C272 63 aaPredicted RBP2.18□□□□□ -2.06
MSD1YPL104W YHR032W-AP0C5N6 59 aa2.18□□□□□ -2.06
MSD1YPL104W YHR073W-AP0C5N7 58 aa2.18□□□□□ -2.06
MSD1YPL104W YDR182W-AQ3E796 67 aa2.18□□□□□ -2.06
MSD1YPL104W YOL166W-AQ8TGJ1 51 aa2.18□□□□□ -2.06
MSD1YPL104W COX7P10174 60 aa2.16□□□□□ -2.06
MSD1YPL104W YLR361C-AQ3E795 98 aa2.15□□□□□ -2.07
MSD1YPL104W YML100W-AQ8TGT0 57 aa2.14□□□□□ -2.07
MSD1YPL104W YIR021W-AQ3E739 70 aa2.13□□□□□ -2.07
MSD1YPL104W YOR316C-AQ3E806 69 aa2.12□□□□□ -2.07
MSD1YPL104W RPS30AP0CX33 63 aaKnown RBP2.12□□□□□ -2.07
MSD1YPL104W RPS30BP0CX34 63 aaKnown RBP2.12□□□□□ -2.07
MSD1YPL104W YJR128WP47162 119 aa2.12□□□□□ -2.07
MSD1YPL104W YGR164WP53291 111 aa2.11□□□□□ -2.07
MSD1YPL104W YNL122CP53921 115 aaPredicted RBP2.11□□□□□ -2.07
MSD1YPL104W FYV12Q08559 129 aa2.09□□□□□ -2.07
MSD1YPL104W SDH6Q3E785 79 aa2.09□□□□□ -2.07
MSD1YPL104W YLR255CO13574 117 aa2.09□□□□□ -2.08
MSD1YPL104W YGR146C-AQ8TGT9 53 aa2.09□□□□□ -2.08
MSD1YPL104W COX8P04039 78 aa2.08□□□□□ -2.08
MSD1YPL104W YKL065W-AQ2V2P2 73 aa2.08□□□□□ -2.08
MSD1YPL104W YLR412C-AQ3E742 68 aa2.08□□□□□ -2.08
MSD1YPL104W SBH1P52870 82 aa2.07□□□□□ -2.08
MSD1YPL104W CMC4Q3E7A9 73 aa2.07□□□□□ -2.08
MSD1YPL104W YJL144WP47009 104 aa2.05□□□□□ -2.08
MSD1YPL104W YMR001C-AQ8TGS9 76 aa2.05□□□□□ -2.08
MSD1YPL104W OLI1P61829 76 aa2.05□□□□□ -2.08
MSD1YPL104W HUB1Q6Q546 73 aa2.05□□□□□ -2.08
MSD1YPL104W OST5Q92316 86 aa2.05□□□□□ -2.08
MSD1YPL104W YBR016WP38216 128 aa2.04□□□□□ -2.08
MSD1YPL104W YBR201C-AQ2V2Q3 67 aa2.03□□□□□ -2.08
MSD1YPL104W YOR381W-AQ3E804 55 aa2.03□□□□□ -2.08
MSD1YPL104W RPL37BP51402 88 aaKnown RBP2.01□□□□□ -2.09
MSD1YPL104W YMR122CQ03879 124 aa2.01□□□□□ -2.09
MSD1YPL104W YIL156W-BQ2V2P4 73 aa2.01□□□□□ -2.09
MSD1YPL104W MRX7P53869 86 aa2.01□□□□□ -2.09
MSD1YPL104W Q0017Q9ZZX8 53 aa1.98□□□□□ -2.09
MSD1YPL104W YCR095W-AQ3E787 52 aa1.97□□□□□ -2.09
MSD1YPL104W YER188C-AP0C0V2 99 aa1.96□□□□□ -2.1
MSD1YPL104W YJL009WP47078 108 aa1.93□□□□□ -2.1
MSD1YPL104W YNL277W-AQ3E7Z0 62 aa1.93□□□□□ -2.1
MSD1YPL104W ATP17Q06405 101 aa1.92□□□□□ -2.1
MSD1YPL104W YBL044WP38194 122 aa1.89□□□□□ -2.11
MSD1YPL104W YML054C-AQ3E809 52 aa1.88□□□□□ -2.11
MSD1YPL104W YOR394C-AQ8TGJ0 55 aa1.88□□□□□ -2.11
MSD1YPL104W YDR210WQ03482 75 aa1.86□□□□□ -2.11
MSD1YPL104W YHR086W-AQ3E746 53 aa1.84□□□□□ -2.11
MSD1YPL104W YEL014CP39999 101 aa1.83□□□□□ -2.12
MSD1YPL104W YCR108CQ3E819 63 aa1.83□□□□□ -2.12
MSD1YPL104W SOM1Q05676 74 aa1.81□□□□□ -2.12
MSD1YPL104W QCR10P37299 77 aa1.79□□□□□ -2.12
MSD1YPL104W RPL37AP49166 88 aaKnown RBP1.79□□□□□ -2.12
MSD1YPL104W YGL014C-AP0C5N1 53 aa1.76□□□□□ -2.13
MSD1YPL104W YOR376W-AQ3E805 51 aa1.76□□□□□ -2.13
MSD1YPL104W YOR072W-BQ3E832 53 aa1.74□□□□□ -2.13
MSD1YPL104W HHY1P39982 102 aa1.66□□□□□ -2.14
MSD1YPL104W YBR072C-AQ3E794 53 aa1.63□□□□□ -2.15
MSD1YPL104W RPS29BP41058 56 aaKnown RBP1.59□□□□□ -2.16
MSD1YPL104W RPS29AP41057 56 aaKnown RBP1.52□□□□□ -2.17
MSD1YPL104W YHR050W-AQ05451 56 aa1.42□□□□□ -2.18
MSD1YPL104W YOL164W-AQ3E7A5 60 aa1.26□□□□□ -2.21
MSD1YPL104W YLR157W-EP0CF00 54 aa1.16□□□□□ -2.22
Retrieved 63 of 5,963 RNA–protein pairs in 33.6 ms