RNA–Protein interactions for RNA: YOR138C

RUP1, Transcript of Protein that regulates ubiquitination of Rsp5p, yeastyeast

Gene RUP1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUP1YOR138C YJR085CP47131 105 aaKnown RBP4.8□□□□□ -1.64
RUP1YOR138C MMS2P53152 137 aa4.8□□□□□ -1.64
RUP1YOR138C YKL065W-AQ2V2P2 73 aa4.8□□□□□ -1.64
RUP1YOR138C OST5Q92316 86 aa4.78□□□□□ -1.64
RUP1YOR138C LCL2Q08045 131 aa4.77□□□□□ -1.65
RUP1YOR138C YMR001C-AQ8TGS9 76 aa4.77□□□□□ -1.65
RUP1YOR138C HUB1Q6Q546 73 aa4.76□□□□□ -1.65
RUP1YOR138C YER188C-AP0C0V2 99 aa4.75□□□□□ -1.65
RUP1YOR138C LCL1Q02786 101 aa4.75□□□□□ -1.65
RUP1YOR138C YFR032C-BQ8TGU2 87 aa4.72□□□□□ -1.65
RUP1YOR138C YJR128WP47162 119 aa4.71□□□□□ -1.66
RUP1YOR138C YGL149WP53116 101 aa4.71□□□□□ -1.66
RUP1YOR138C YCR095W-AQ3E787 52 aa4.7□□□□□ -1.66
RUP1YOR138C YNL277W-AQ3E7Z0 62 aa4.68□□□□□ -1.66
RUP1YOR138C DDR48P18899 430 aaKnown RBP4.65□□□□□ -1.67
RUP1YOR138C YHR073W-AP0C5N7 58 aa4.64□□□□□ -1.67
RUP1YOR138C YOR316C-AQ3E806 69 aa4.62□□□□□ -1.67
RUP1YOR138C YGR146C-AQ8TGT9 53 aa4.62□□□□□ -1.67
RUP1YOR138C YNL122CP53921 115 aaPredicted RBP4.61□□□□□ -1.67
RUP1YOR138C COX8P04039 78 aa4.6□□□□□ -1.67
RUP1YOR138C YBR201C-AQ2V2Q3 67 aa4.6□□□□□ -1.67
RUP1YOR138C YLR255CO13574 117 aa4.59□□□□□ -1.67
RUP1YOR138C YIL156W-BQ2V2P4 73 aa4.57□□□□□ -1.68
RUP1YOR138C MDN1Q12019 4910 aaKnown RBP4.57□□□□□ -1.68
RUP1YOR138C YER175W-AQ8TGU4 54 aa4.54□□□□□ -1.68
RUP1YOR138C ATP17Q06405 101 aa4.53□□□□□ -1.68
RUP1YOR138C YBL008W-AQ3E821 79 aa4.52□□□□□ -1.69
RUP1YOR138C YJL144WP47009 104 aa4.51□□□□□ -1.69
RUP1YOR138C OLI1P61829 76 aa4.51□□□□□ -1.69
RUP1YOR138C YOR376W-AQ3E805 51 aa4.51□□□□□ -1.69
RUP1YOR138C COX7P10174 60 aa4.5□□□□□ -1.69
RUP1YOR138C YGL034CP53186 121 aa4.49□□□□□ -1.69
RUP1YOR138C MRX7P53869 86 aa4.46□□□□□ -1.69
RUP1YOR138C YBR016WP38216 128 aa4.46□□□□□ -1.7
RUP1YOR138C FYV12Q08559 129 aa4.46□□□□□ -1.7
RUP1YOR138C YML100W-AQ8TGT0 57 aa4.43□□□□□ -1.7
RUP1YOR138C YFL067WP43537 175 aa4.41□□□□□ -1.7
RUP1YOR138C RPL37BP51402 88 aaKnown RBP4.39□□□□□ -1.71
RUP1YOR138C YEL014CP39999 101 aa4.31□□□□□ -1.72
RUP1YOR138C YGL014C-AP0C5N1 53 aa4.27□□□□□ -1.73
RUP1YOR138C YBL044WP38194 122 aa4.24□□□□□ -1.73
RUP1YOR138C YCR108CQ3E819 63 aa4.23□□□□□ -1.73
RUP1YOR138C QCR10P37299 77 aa4.21□□□□□ -1.74
RUP1YOR138C YOR394C-AQ8TGJ0 55 aa4.19□□□□□ -1.74
RUP1YOR138C CMC4Q3E7A9 73 aa4.11□□□□□ -1.75
RUP1YOR138C SOM1Q05676 74 aa4.09□□□□□ -1.75
RUP1YOR138C YJL009WP47078 108 aa4□□□□□ -1.77
RUP1YOR138C Q0017Q9ZZX8 53 aa4□□□□□ -1.77
RUP1YOR138C RPL37AP49166 88 aaKnown RBP3.99□□□□□ -1.77
RUP1YOR138C YML054C-AQ3E809 52 aa3.96□□□□□ -1.78
RUP1YOR138C YOR072W-BQ3E832 53 aa3.9□□□□□ -1.79
RUP1YOR138C YDR210WQ03482 75 aa3.85□□□□□ -1.79
RUP1YOR138C HHY1P39982 102 aa3.84□□□□□ -1.79
RUP1YOR138C YBR072C-AQ3E794 53 aa3.76□□□□□ -1.81
RUP1YOR138C YER078W-AQ3E7A2 54 aa3.71□□□□□ -1.82
RUP1YOR138C YHR032W-AP0C5N6 59 aa3.48□□□□□ -1.85
RUP1YOR138C YAL067W-AQ8TGK6 75 aa3.32□□□□□ -1.88
RUP1YOR138C YHR050W-AQ05451 56 aa3.12□□□□□ -1.91
RUP1YOR138C YOL164W-AQ3E7A5 60 aa3.12□□□□□ -1.91
RUP1YOR138C RPS29BP41058 56 aaKnown RBP3.06□□□□□ -1.92
RUP1YOR138C RPS29AP41057 56 aaKnown RBP2.86□□□□□ -1.95
RUP1YOR138C YLR157W-EP0CF00 54 aa2.71□□□□□ -1.98
RUP1YOR138C YHR086W-AQ3E746 53 aa2.63□□□□□ -1.99
Retrieved 63 of 5,963 RNA–protein pairs in 11.8 ms