RNA–Protein interactions for RNA: YOR018W

ROD1, Transcript of Alpha-arrestin involved in ubiquitin-dependent endocytosis, yeastyeast

Gene ROD1, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROD1YOR018W AIM4P38305 123 aaPredicted RBP2.13□□□□□ -2.07
ROD1YOR018W COX7P10174 60 aa2.13□□□□□ -2.07
ROD1YOR018W CMC4Q3E7A9 73 aa2.12□□□□□ -2.07
ROD1YOR018W RPL37BP51402 88 aaKnown RBP2.11□□□□□ -2.07
ROD1YOR018W YHR125WP38831 101 aa2.1□□□□□ -2.07
ROD1YOR018W RPS30AP0CX33 63 aaKnown RBP2.1□□□□□ -2.07
ROD1YOR018W RPS30BP0CX34 63 aaKnown RBP2.1□□□□□ -2.07
ROD1YOR018W YGR164WP53291 111 aa2.1□□□□□ -2.07
ROD1YOR018W YGL034CP53186 121 aa2.09□□□□□ -2.08
ROD1YOR018W YLR255CO13574 117 aa2.08□□□□□ -2.08
ROD1YOR018W TOM6P33448 61 aa2.08□□□□□ -2.08
ROD1YOR018W YGR146C-AQ8TGT9 53 aa2.07□□□□□ -2.08
ROD1YOR018W YKL065W-AQ2V2P2 73 aa2.07□□□□□ -2.08
ROD1YOR018W YBR016WP38216 128 aa2.06□□□□□ -2.08
ROD1YOR018W COX8P04039 78 aa2.05□□□□□ -2.08
ROD1YOR018W YDR182W-AQ3E796 67 aa2.05□□□□□ -2.08
ROD1YOR018W YFR032C-BQ8TGU2 87 aa2.04□□□□□ -2.08
ROD1YOR018W YBL008W-AQ3E821 79 aa2.02□□□□□ -2.09
ROD1YOR018W SDH6Q3E785 79 aa2□□□□□ -2.09
ROD1YOR018W YMR001C-AQ8TGS9 76 aa1.99□□□□□ -2.09
ROD1YOR018W YIL156W-BQ2V2P4 73 aa1.99□□□□□ -2.09
ROD1YOR018W YJL009WP47078 108 aa1.98□□□□□ -2.09
ROD1YOR018W OLI1P61829 76 aa1.98□□□□□ -2.09
ROD1YOR018W YBR201C-AQ2V2Q3 67 aa1.97□□□□□ -2.09
ROD1YOR018W FYV12Q08559 129 aa1.96□□□□□ -2.09
ROD1YOR018W OST5Q92316 86 aa1.96□□□□□ -2.09
ROD1YOR018W YBL044WP38194 122 aa1.95□□□□□ -2.1
ROD1YOR018W YMR122CQ03879 124 aa1.95□□□□□ -2.1
ROD1YOR018W HUB1Q6Q546 73 aa1.95□□□□□ -2.1
ROD1YOR018W YBR121C-AP0C5L4 52 aa1.93□□□□□ -2.1
ROD1YOR018W YOR381W-AQ3E804 55 aa1.93□□□□□ -2.1
ROD1YOR018W MRX7P53869 86 aa1.92□□□□□ -2.1
ROD1YOR018W Q0017Q9ZZX8 53 aa1.92□□□□□ -2.1
ROD1YOR018W YDR210WQ03482 75 aa1.91□□□□□ -2.1
ROD1YOR018W YIR021W-AQ3E739 70 aa1.9□□□□□ -2.1
ROD1YOR018W YER188C-AP0C0V2 99 aa1.88□□□□□ -2.11
ROD1YOR018W YCR095W-AQ3E787 52 aa1.86□□□□□ -2.11
ROD1YOR018W YCR108CQ3E819 63 aa1.85□□□□□ -2.11
ROD1YOR018W YOR394C-AQ8TGJ0 55 aa1.84□□□□□ -2.12
ROD1YOR018W YHR032W-AP0C5N6 59 aa1.83□□□□□ -2.12
ROD1YOR018W SBH1P52870 82 aa1.82□□□□□ -2.12
ROD1YOR018W ATP17Q06405 101 aa1.8□□□□□ -2.12
ROD1YOR018W YML054C-AQ3E809 52 aa1.79□□□□□ -2.12
ROD1YOR018W YEL014CP39999 101 aa1.78□□□□□ -2.12
ROD1YOR018W RPL37AP49166 88 aaKnown RBP1.75□□□□□ -2.13
ROD1YOR018W YLR412C-AQ3E742 68 aa1.68□□□□□ -2.14
ROD1YOR018W QCR10P37299 77 aa1.65□□□□□ -2.15
ROD1YOR018W YGL014C-AP0C5N1 53 aa1.64□□□□□ -2.15
ROD1YOR018W YOR376W-AQ3E805 51 aa1.64□□□□□ -2.15
ROD1YOR018W YHR086W-AQ3E746 53 aa1.64□□□□□ -2.15
ROD1YOR018W YML100W-AQ8TGT0 57 aa1.63□□□□□ -2.15
ROD1YOR018W YOR072W-BQ3E832 53 aa1.62□□□□□ -2.15
ROD1YOR018W HHY1P39982 102 aa1.59□□□□□ -2.15
ROD1YOR018W YNL277W-AQ3E7Z0 62 aa1.58□□□□□ -2.16
ROD1YOR018W SOM1Q05676 74 aa1.58□□□□□ -2.16
ROD1YOR018W RPS29BP41058 56 aaKnown RBP1.57□□□□□ -2.16
ROD1YOR018W RPS28BP0C0X0 67 aaKnown RBP1.56□□□□□ -2.16
ROD1YOR018W RPS28AQ3E7X9 67 aaPredicted RBP1.56□□□□□ -2.16
ROD1YOR018W RPS29AP41057 56 aaKnown RBP1.52□□□□□ -2.17
ROD1YOR018W YBR072C-AQ3E794 53 aa1.45□□□□□ -2.18
ROD1YOR018W YHR050W-AQ05451 56 aa1.3□□□□□ -2.2
ROD1YOR018W YOL164W-AQ3E7A5 60 aa1.18□□□□□ -2.22
ROD1YOR018W YLR157W-EP0CF00 54 aa1.07□□□□□ -2.24
Retrieved 63 of 5,963 RNA–protein pairs in 9.6 ms