RNA–Protein interactions for RNA: YNL330C

RPD3, Transcript of Histone deacetylase, component of both the Rpd3S and Rpd3L complexes, yeastyeast

Gene RPD3, Length 1,302 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPD3YNL330C MMS2P53152 137 aa5.49□□□□□ -1.53
RPD3YNL330C YDL012CQ12489 107 aa5.49□□□□□ -1.53
RPD3YNL330C YMR122CQ03879 124 aa5.48□□□□□ -1.53
RPD3YNL330C HUB1Q6Q546 73 aa5.48□□□□□ -1.53
RPD3YNL330C HHF1P02309 103 aaKnown RBP5.45□□□□□ -1.54
RPD3YNL330C YGL149WP53116 101 aa5.44□□□□□ -1.54
RPD3YNL330C YMR001C-AQ8TGS9 76 aa5.44□□□□□ -1.54
RPD3YNL330C YHR073W-AP0C5N7 58 aa5.43□□□□□ -1.54
RPD3YNL330C YER188C-AP0C0V2 99 aa5.42□□□□□ -1.54
RPD3YNL330C OST5Q92316 86 aa5.42□□□□□ -1.54
RPD3YNL330C YDR010CQ12426 110 aa5.41□□□□□ -1.54
RPD3YNL330C YFR032C-BQ8TGU2 87 aa5.39□□□□□ -1.55
RPD3YNL330C YJR128WP47162 119 aa5.37□□□□□ -1.55
RPD3YNL330C YNL277W-AQ3E7Z0 62 aa5.35□□□□□ -1.55
RPD3YNL330C DDR48P18899 430 aaKnown RBP5.34□□□□□ -1.55
RPD3YNL330C YGR146C-AQ8TGT9 53 aa5.34□□□□□ -1.55
RPD3YNL330C YOR316C-AQ3E806 69 aa5.32□□□□□ -1.56
RPD3YNL330C YLR255CO13574 117 aa5.31□□□□□ -1.56
RPD3YNL330C YCR095W-AQ3E787 52 aa5.3□□□□□ -1.56
RPD3YNL330C COX8P04039 78 aa5.28□□□□□ -1.56
RPD3YNL330C COX7P10174 60 aa5.26□□□□□ -1.57
RPD3YNL330C YBR201C-AQ2V2Q3 67 aa5.25□□□□□ -1.57
RPD3YNL330C YBL008W-AQ3E821 79 aa5.22□□□□□ -1.57
RPD3YNL330C YNL122CP53921 115 aaPredicted RBP5.19□□□□□ -1.58
RPD3YNL330C OLI1P61829 76 aa5.18□□□□□ -1.58
RPD3YNL330C ATP17Q06405 101 aa5.18□□□□□ -1.58
RPD3YNL330C MRX7P53869 86 aa5.16□□□□□ -1.58
RPD3YNL330C YBR016WP38216 128 aa5.15□□□□□ -1.59
RPD3YNL330C YIL156W-BQ2V2P4 73 aa5.14□□□□□ -1.59
RPD3YNL330C YJL144WP47009 104 aa5.12□□□□□ -1.59
RPD3YNL330C YFL067WP43537 175 aa5.1□□□□□ -1.59
RPD3YNL330C RPL37BP51402 88 aaKnown RBP5.09□□□□□ -1.59
RPD3YNL330C FYV12Q08559 129 aa5.06□□□□□ -1.6
RPD3YNL330C YML100W-AQ8TGT0 57 aa5.04□□□□□ -1.6
RPD3YNL330C YER175W-AQ8TGU4 54 aa5.04□□□□□ -1.6
RPD3YNL330C YOR376W-AQ3E805 51 aa5.01□□□□□ -1.61
RPD3YNL330C YGL034CP53186 121 aa4.99□□□□□ -1.61
RPD3YNL330C CMC4Q3E7A9 73 aa4.89□□□□□ -1.63
RPD3YNL330C YEL014CP39999 101 aa4.86□□□□□ -1.63
RPD3YNL330C YGL014C-AP0C5N1 53 aa4.83□□□□□ -1.64
RPD3YNL330C QCR10P37299 77 aa4.81□□□□□ -1.64
RPD3YNL330C YOR394C-AQ8TGJ0 55 aa4.81□□□□□ -1.64
RPD3YNL330C YCR108CQ3E819 63 aa4.78□□□□□ -1.64
RPD3YNL330C YBL044WP38194 122 aa4.75□□□□□ -1.65
RPD3YNL330C Q0017Q9ZZX8 53 aa4.75□□□□□ -1.65
RPD3YNL330C YML054C-AQ3E809 52 aa4.67□□□□□ -1.66
RPD3YNL330C YJL009WP47078 108 aa4.65□□□□□ -1.67
RPD3YNL330C MDN1Q12019 4910 aaKnown RBP4.65□□□□□ -1.67
RPD3YNL330C RPL37AP49166 88 aaKnown RBP4.62□□□□□ -1.67
RPD3YNL330C SOM1Q05676 74 aa4.62□□□□□ -1.67
RPD3YNL330C YOR072W-BQ3E832 53 aa4.5□□□□□ -1.69
RPD3YNL330C YDR210WQ03482 75 aa4.43□□□□□ -1.7
RPD3YNL330C HHY1P39982 102 aa4.36□□□□□ -1.71
RPD3YNL330C YBR072C-AQ3E794 53 aa4.36□□□□□ -1.71
RPD3YNL330C YHR032W-AP0C5N6 59 aa4.09□□□□□ -1.75
RPD3YNL330C YER078W-AQ3E7A2 54 aa4.09□□□□□ -1.75
RPD3YNL330C YAL067W-AQ8TGK6 75 aa4.09□□□□□ -1.75
RPD3YNL330C RPS29BP41058 56 aaKnown RBP3.67□□□□□ -1.82
RPD3YNL330C YHR050W-AQ05451 56 aa3.63□□□□□ -1.83
RPD3YNL330C RPS29AP41057 56 aaKnown RBP3.45□□□□□ -1.86
RPD3YNL330C YOL164W-AQ3E7A5 60 aa3.44□□□□□ -1.86
RPD3YNL330C YHR086W-AQ3E746 53 aa3.25□□□□□ -1.89
RPD3YNL330C YLR157W-EP0CF00 54 aa3.07□□□□□ -1.92
Retrieved 63 of 5,963 RNA–protein pairs in 9.1 ms