RNA–Protein interactions for RNA: YLR397C

AFG2, Transcript of ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex, yeastyeast

Gene AFG2, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFG2YLR397C YER175W-AQ8TGU4 54 aa4.74□□□□□ -1.65
AFG2YLR397C YCR041WP37265 110 aa4.72□□□□□ -1.65
AFG2YLR397C YLR255CO13574 117 aa4.7□□□□□ -1.66
AFG2YLR397C YEL014CP39999 101 aa4.7□□□□□ -1.66
AFG2YLR397C HOR7Q05827 59 aa4.7□□□□□ -1.66
AFG2YLR397C YDR115WQ04598 105 aa4.69□□□□□ -1.66
AFG2YLR397C COX8P04039 78 aa4.68□□□□□ -1.66
AFG2YLR397C UTP20P35194 2493 aaKnown RBP4.68□□□□□ -1.66
AFG2YLR397C MEC1P38111 2368 aa4.66□□□□□ -1.66
AFG2YLR397C RPL33BP41056 107 aaKnown RBP4.63□□□□□ -1.67
AFG2YLR397C FMP27Q06179 2628 aa4.63□□□□□ -1.67
AFG2YLR397C RDS3Q06835 107 aaPredicted RBP4.62□□□□□ -1.67
AFG2YLR397C YGR240C-AQ3E786 66 aa4.61□□□□□ -1.67
AFG2YLR397C YCR108CQ3E819 63 aa4.61□□□□□ -1.67
AFG2YLR397C YGR146C-AQ8TGT9 53 aa4.61□□□□□ -1.67
AFG2YLR397C RPL33AP05744 107 aaKnown RBP4.59□□□□□ -1.67
AFG2YLR397C YPR195CQ06594 109 aa4.56□□□□□ -1.68
AFG2YLR397C YOL097W-AQ3E7Y9 61 aa4.55□□□□□ -1.68
AFG2YLR397C YOR394C-AQ8TGJ0 55 aa4.55□□□□□ -1.68
AFG2YLR397C YPR117WQ06116 2489 aa4.55□□□□□ -1.68
AFG2YLR397C YBL044WP38194 122 aa4.54□□□□□ -1.68
AFG2YLR397C YHR032W-AP0C5N6 59 aa4.52□□□□□ -1.69
AFG2YLR397C YLL066W-BQ8TGJ7 56 aa4.52□□□□□ -1.69
AFG2YLR397C YHR212W-AP0CX91 67 aa4.51□□□□□ -1.69
AFG2YLR397C YJL144WP47009 104 aa4.48□□□□□ -1.69
AFG2YLR397C RPL37BP51402 88 aaKnown RBP4.48□□□□□ -1.69
AFG2YLR397C YOR316C-AQ3E806 69 aa4.48□□□□□ -1.69
AFG2YLR397C YGL041C-BQ3E750 60 aa4.47□□□□□ -1.69
AFG2YLR397C YLR122CQ12312 125 aa4.45□□□□□ -1.7
AFG2YLR397C OLI1P61829 76 aa4.44□□□□□ -1.7
AFG2YLR397C YGL260WP53056 76 aa4.44□□□□□ -1.7
AFG2YLR397C YJR085CP47131 105 aaKnown RBP4.43□□□□□ -1.7
AFG2YLR397C YBR016WP38216 128 aa4.39□□□□□ -1.71
AFG2YLR397C LCL1Q02786 101 aa4.35□□□□□ -1.71
AFG2YLR397C COX7P10174 60 aa4.35□□□□□ -1.71
AFG2YLR397C YDR034W-BQ6Q5X2 51 aa4.34□□□□□ -1.71
AFG2YLR397C YHR073W-AP0C5N7 58 aa4.34□□□□□ -1.72
AFG2YLR397C YAL067W-AQ8TGK6 75 aa4.26□□□□□ -1.73
AFG2YLR397C NUM1Q00402 2748 aa4.25□□□□□ -1.73
AFG2YLR397C Q0297Q9ZZV8 51 aa4.24□□□□□ -1.73
AFG2YLR397C YBR056W-AI2HB52 66 aa4.24□□□□□ -1.73
AFG2YLR397C TEL1P38110 2787 aa4.23□□□□□ -1.73
AFG2YLR397C TOR2P32600 2474 aaKnown RBP4.2□□□□□ -1.74
AFG2YLR397C YDR034C-AP0C289 58 aa4.16□□□□□ -1.74
AFG2YLR397C TOR1P35169 2470 aa4.11□□□□□ -1.75
AFG2YLR397C HHY1P39982 102 aa4.09□□□□□ -1.75
AFG2YLR397C YFL067WP43537 175 aa4.07□□□□□ -1.76
AFG2YLR397C YJL009WP47078 108 aa4.03□□□□□ -1.77
AFG2YLR397C RPL37AP49166 88 aaKnown RBP4.03□□□□□ -1.77
AFG2YLR397C YBR072C-AQ3E794 53 aa3.97□□□□□ -1.77
AFG2YLR397C CUP1-1P0CX80 61 aa3.95□□□□□ -1.78
AFG2YLR397C CUP1-2P0CX81 61 aa3.95□□□□□ -1.78
AFG2YLR397C YOR072W-BQ3E832 53 aa3.89□□□□□ -1.79
AFG2YLR397C YOL164W-AQ3E7A5 60 aa3.7□□□□□ -1.82
AFG2YLR397C DYN1P36022 4092 aa3.67□□□□□ -1.82
AFG2YLR397C YML054C-AQ3E809 52 aa3.43□□□□□ -1.86
AFG2YLR397C YHR086W-AQ3E746 53 aa3.38□□□□□ -1.87
AFG2YLR397C Q0017Q9ZZX8 53 aa3.24□□□□□ -1.89
AFG2YLR397C YLR157W-EP0CF00 54 aa3.13□□□□□ -1.91
AFG2YLR397C MDN1Q12019 4910 aaKnown RBP3.05□□□□□ -1.92
AFG2YLR397C YHR050W-AQ05451 56 aa2.96□□□□□ -1.94
AFG2YLR397C RPS29AP41057 56 aaKnown RBP2.71□□□□□ -1.98
AFG2YLR397C RPS29BP41058 56 aaKnown RBP2.46□□□□□ -2.02
Retrieved 63 of 5,963 RNA–protein pairs in 11.3 ms