RNA–Protein interactions for RNA: YLR147C

SMD3, Transcript of Core Sm protein Sm D3, yeastyeast

Gene SMD3, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD3YLR147C LSM2P38203 95 aaKnown RBP0□□□□□ -2.41
SMD3YLR147C DDR2P89113 61 aa0□□□□□ -2.41
SMD3YLR147C PAU23Q07987 124 aa0□□□□□ -2.41
SMD3YLR147C PAU17Q12370 124 aa0□□□□□ -2.41
SMD3YLR147C YMR175W-AQ3E766 64 aa0□□□□□ -2.41
SMD3YLR147C YCL001W-BQ96VH2 84 aa0□□□□□ -2.41
SMD3YLR147C YML054C-AQ3E809 52 aa-0.01□□□□□ -2.41
SMD3YLR147C EDC1P53080 175 aaPredicted RBP-0.02□□□□□ -2.41
SMD3YLR147C POC4Q12245 148 aaPredicted RBP-0.02□□□□□ -2.41
SMD3YLR147C YDR381C-AQ3E6R5 114 aa-0.02□□□□□ -2.41
SMD3YLR147C YKL068W-AQ3E826 78 aa-0.02□□□□□ -2.41
SMD3YLR147C NOP10Q6Q547 58 aaPredicted RBP-0.02□□□□□ -2.41
SMD3YLR147C YCR085WP25650 117 aa-0.03□□□□□ -2.41
SMD3YLR147C YCR108CQ3E819 63 aa-0.03□□□□□ -2.41
SMD3YLR147C YBL039W-BP0C268 59 aa-0.04□□□□□ -2.42
SMD3YLR147C YBR032WP38223 100 aa-0.04□□□□□ -2.42
SMD3YLR147C YIL156W-BQ2V2P4 73 aa-0.04□□□□□ -2.42
SMD3YLR147C YOL097W-AQ3E7Y9 61 aa-0.04□□□□□ -2.42
SMD3YLR147C YGL194C-AQ2V2P6 80 aa-0.05□□□□□ -2.42
SMD3YLR147C COX9P07255 59 aa-0.06□□□□□ -2.42
SMD3YLR147C YBL044WP38194 122 aa-0.06□□□□□ -2.42
SMD3YLR147C SMX2P40204 77 aaKnown RBP-0.06□□□□□ -2.42
SMD3YLR147C YHR050W-AQ05451 56 aa-0.06□□□□□ -2.42
SMD3YLR147C YLR157W-DP0CE99 70 aa-0.07□□□□□ -2.42
SMD3YLR147C YOR105WQ08504 108 aa-0.07□□□□□ -2.42
SMD3YLR147C YDR246W-AQ3E763 66 aa-0.07□□□□□ -2.42
SMD3YLR147C YLR342W-AQ3E810 57 aa-0.07□□□□□ -2.42
SMD3YLR147C TOS6P48560 102 aa-0.08□□□□□ -2.42
SMD3YLR147C YKL065W-AQ2V2P2 73 aa-0.08□□□□□ -2.42
SMD3YLR147C YKL023C-AQ2V2P3 75 aa-0.08□□□□□ -2.42
SMD3YLR147C SWM2P40342 146 aa-0.09□□□□□ -2.42
SMD3YLR147C YOR314WQ12506 109 aa-0.09□□□□□ -2.42
SMD3YLR147C YDL022C-AP0C5L6 82 aa-0.1□□□□□ -2.43
SMD3YLR147C YJL127C-BQ3E828 52 aa-0.1□□□□□ -2.43
SMD3YLR147C YBR230W-AQ3E762 66 aa-0.11□□□□□ -2.43
SMD3YLR147C COA2Q3E823 68 aa-0.11□□□□□ -2.43
SMD3YLR147C YJL133C-AQ3E7A3 74 aa-0.12□□□□□ -2.43
SMD3YLR147C YLL006W-AQ3E814 58 aa-0.12□□□□□ -2.43
SMD3YLR147C RPL29P05747 59 aaPredicted RBP-0.13□□□□□ -2.43
SMD3YLR147C YOR316C-AQ3E806 69 aa-0.13□□□□□ -2.43
SMD3YLR147C YOR008C-AQ3E7B9 74 aa-0.14□□□□□ -2.43
SMD3YLR147C YOR072W-BQ3E832 53 aa-0.14□□□□□ -2.43
SMD3YLR147C YHR213W-AQ8TGT4 77 aa-0.14□□□□□ -2.43
SMD3YLR147C RPS30AP0CX33 63 aaKnown RBP-0.15□□□□□ -2.43
SMD3YLR147C RPS30BP0CX34 63 aaKnown RBP-0.15□□□□□ -2.43
SMD3YLR147C QCR9P22289 66 aa-0.15□□□□□ -2.43
SMD3YLR147C ATP17Q06405 101 aa-0.15□□□□□ -2.43
SMD3YLR147C YLR146W-AQ2V2P1 62 aa-0.17□□□□□ -2.44
SMD3YLR147C YMR001C-AQ8TGS9 76 aa-0.17□□□□□ -2.44
SMD3YLR147C YDR182W-AQ3E796 67 aa-0.18□□□□□ -2.44
SMD3YLR147C PAU7P39545 55 aa-0.19□□□□□ -2.44
SMD3YLR147C OLI1P61829 76 aa-0.19□□□□□ -2.44
SMD3YLR147C YDR119W-AQ2V2P9 66 aa-0.19□□□□□ -2.44
SMD3YLR147C YOR394C-AQ8TGJ0 55 aa-0.19□□□□□ -2.44
SMD3YLR147C YGR146C-AQ8TGT9 53 aa-0.25□□□□□ -2.45
SMD3YLR147C SSS1P35179 80 aa-0.26□□□□□ -2.45
SMD3YLR147C HUB1Q6Q546 73 aa-0.27□□□□□ -2.45
SMD3YLR147C YFL041W-AQ3E817 63 aa-0.3□□□□□ -2.46
SMD3YLR147C PAI3P01094 68 aa-0.35□□□□□ -2.47
SMD3YLR147C YSY6P38374 65 aa-0.36□□□□□ -2.47
SMD3YLR147C YOL166W-AQ8TGJ1 51 aa-0.39□□□□□ -2.47
SMD3YLR147C YIL102C-AQ2V2P5 75 aa-0.41□□□□□ -2.48
SMD3YLR147C VMA9Q3E7B6 73 aa-0.42□□□□□ -2.48
Retrieved 63 of 5,963 RNA–protein pairs in 5.8 ms