RNA–Protein interactions for RNA: YLR055C

SPT8, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT8, Length 1,809 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT8YLR055C SDH6Q3E785 79 aa7.19□□□□□ -1.26
SPT8YLR055C YPR153WQ06537 140 aa7.18□□□□□ -1.26
SPT8YLR055C YDR010CQ12426 110 aa7.18□□□□□ -1.26
SPT8YLR055C YLR157W-DP0CE99 70 aa7.17□□□□□ -1.26
SPT8YLR055C HUB1Q6Q546 73 aa7.15□□□□□ -1.26
SPT8YLR055C YMR001C-AQ8TGS9 76 aa7.13□□□□□ -1.27
SPT8YLR055C SPG1P50088 95 aa7.13□□□□□ -1.27
SPT8YLR055C YDL012CQ12489 107 aa7.13□□□□□ -1.27
SPT8YLR055C YOL097W-AQ3E7Y9 61 aa7.12□□□□□ -1.27
SPT8YLR055C YJR085CP47131 105 aaKnown RBP7.08□□□□□ -1.28
SPT8YLR055C YCR095W-AQ3E787 52 aa7.05□□□□□ -1.28
SPT8YLR055C YOR376W-AQ3E805 51 aa7.05□□□□□ -1.28
SPT8YLR055C YML100W-AQ8TGT0 57 aa7.01□□□□□ -1.29
SPT8YLR055C YFR032C-BQ8TGU2 87 aa7.01□□□□□ -1.29
SPT8YLR055C LCL1Q02786 101 aa6.99□□□□□ -1.29
SPT8YLR055C YJR128WP47162 119 aa6.96□□□□□ -1.3
SPT8YLR055C YGL034CP53186 121 aa6.96□□□□□ -1.3
SPT8YLR055C YHR073W-AP0C5N7 58 aa6.91□□□□□ -1.3
SPT8YLR055C YGR146C-AQ8TGT9 53 aa6.88□□□□□ -1.31
SPT8YLR055C YLR255CO13574 117 aa6.87□□□□□ -1.31
SPT8YLR055C YIL156W-BQ2V2P4 73 aa6.87□□□□□ -1.31
SPT8YLR055C YNL122CP53921 115 aaPredicted RBP6.86□□□□□ -1.31
SPT8YLR055C ATP17Q06405 101 aa6.85□□□□□ -1.31
SPT8YLR055C YOR316C-AQ3E806 69 aa6.83□□□□□ -1.32
SPT8YLR055C YGL149WP53116 101 aa6.82□□□□□ -1.32
SPT8YLR055C YBR201C-AQ2V2Q3 67 aa6.82□□□□□ -1.32
SPT8YLR055C DDR48P18899 430 aaKnown RBP6.81□□□□□ -1.32
SPT8YLR055C YFL067WP43537 175 aa6.81□□□□□ -1.32
SPT8YLR055C COX8P04039 78 aa6.8□□□□□ -1.32
SPT8YLR055C YBL008W-AQ3E821 79 aa6.77□□□□□ -1.33
SPT8YLR055C MRX7P53869 86 aa6.7□□□□□ -1.34
SPT8YLR055C OLI1P61829 76 aa6.66□□□□□ -1.34
SPT8YLR055C YBR016WP38216 128 aa6.64□□□□□ -1.35
SPT8YLR055C FYV12Q08559 129 aa6.63□□□□□ -1.35
SPT8YLR055C YJL144WP47009 104 aa6.62□□□□□ -1.35
SPT8YLR055C QCR10P37299 77 aa6.61□□□□□ -1.35
SPT8YLR055C COX7P10174 60 aa6.59□□□□□ -1.35
SPT8YLR055C RPL37BP51402 88 aaKnown RBP6.58□□□□□ -1.36
SPT8YLR055C YGL014C-AP0C5N1 53 aa6.49□□□□□ -1.37
SPT8YLR055C SOM1Q05676 74 aa6.44□□□□□ -1.38
SPT8YLR055C YEL014CP39999 101 aa6.39□□□□□ -1.39
SPT8YLR055C YCR108CQ3E819 63 aa6.29□□□□□ -1.4
SPT8YLR055C CMC4Q3E7A9 73 aa6.26□□□□□ -1.41
SPT8YLR055C YBL044WP38194 122 aa6.25□□□□□ -1.41
SPT8YLR055C YOR394C-AQ8TGJ0 55 aa6.2□□□□□ -1.42
SPT8YLR055C YDR210WQ03482 75 aa6.02□□□□□ -1.45
SPT8YLR055C RPL37AP49166 88 aaKnown RBP5.96□□□□□ -1.46
SPT8YLR055C Q0017Q9ZZX8 53 aa5.88□□□□□ -1.47
SPT8YLR055C YJL009WP47078 108 aa5.86□□□□□ -1.47
SPT8YLR055C YML054C-AQ3E809 52 aa5.83□□□□□ -1.48
SPT8YLR055C YOR072W-BQ3E832 53 aa5.8□□□□□ -1.48
SPT8YLR055C HHY1P39982 102 aa5.7□□□□□ -1.5
SPT8YLR055C YBR072C-AQ3E794 53 aa5.69□□□□□ -1.5
SPT8YLR055C YER078W-AQ3E7A2 54 aa5.69□□□□□ -1.5
SPT8YLR055C YER175W-AQ8TGU4 54 aa5.26□□□□□ -1.57
SPT8YLR055C YHR032W-AP0C5N6 59 aa5.25□□□□□ -1.57
SPT8YLR055C RPS29BP41058 56 aaKnown RBP4.83□□□□□ -1.64
SPT8YLR055C YAL067W-AQ8TGK6 75 aa4.8□□□□□ -1.64
SPT8YLR055C RPS29AP41057 56 aaKnown RBP4.72□□□□□ -1.65
SPT8YLR055C YOL164W-AQ3E7A5 60 aa4.71□□□□□ -1.66
SPT8YLR055C YHR050W-AQ05451 56 aa4.62□□□□□ -1.67
SPT8YLR055C YLR157W-EP0CF00 54 aa4.01□□□□□ -1.77
SPT8YLR055C YHR086W-AQ3E746 53 aa3.87□□□□□ -1.79
Retrieved 63 of 5,963 RNA–protein pairs in 11.1 ms