RNA–Protein interactions for RNA: YJL029C

VPS53, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS53, Length 2,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS53YJL029C YJR128WP47162 119 aa1.91□□□□□ -2.1
VPS53YJL029C RPL38P49167 78 aaKnown RBP1.91□□□□□ -2.1
VPS53YJL029C YSY6P38374 65 aa1.9□□□□□ -2.11
VPS53YJL029C EMC6Q12431 108 aa1.9□□□□□ -2.11
VPS53YJL029C EDC1P53080 175 aaPredicted RBP1.9□□□□□ -2.11
VPS53YJL029C LIP1Q03579 150 aa1.9□□□□□ -2.11
VPS53YJL029C YOR316C-AQ3E806 69 aa1.89□□□□□ -2.11
VPS53YJL029C YPR153WQ06537 140 aa1.89□□□□□ -2.11
VPS53YJL029C YOR376W-AQ3E805 51 aa1.89□□□□□ -2.11
VPS53YJL029C YDR210WQ03482 75 aa1.88□□□□□ -2.11
VPS53YJL029C YLR285C-AQ3E771 56 aa1.88□□□□□ -2.11
VPS53YJL029C AIM4P38305 123 aaPredicted RBP1.86□□□□□ -2.11
VPS53YJL029C YJL009WP47078 108 aa1.86□□□□□ -2.11
VPS53YJL029C YLR255CO13574 117 aa1.85□□□□□ -2.11
VPS53YJL029C YDR246W-AQ3E763 66 aa1.85□□□□□ -2.11
VPS53YJL029C YOR381W-AQ3E804 55 aa1.85□□□□□ -2.11
VPS53YJL029C YFR032C-BQ8TGU2 87 aa1.84□□□□□ -2.11
VPS53YJL029C YHR125WP38831 101 aa1.82□□□□□ -2.12
VPS53YJL029C YOL013W-AP0C272 63 aaPredicted RBP1.81□□□□□ -2.12
VPS53YJL029C YML054C-AQ3E809 52 aa1.81□□□□□ -2.12
VPS53YJL029C NOP10Q6Q547 58 aaPredicted RBP1.81□□□□□ -2.12
VPS53YJL029C YGR146C-AQ8TGT9 53 aa1.81□□□□□ -2.12
VPS53YJL029C YOR314WQ12506 109 aa1.81□□□□□ -2.12
VPS53YJL029C YBR016WP38216 128 aa1.8□□□□□ -2.12
VPS53YJL029C YMR122CQ03879 124 aa1.8□□□□□ -2.12
VPS53YJL029C COX8P04039 78 aa1.8□□□□□ -2.12
VPS53YJL029C YHR032W-AP0C5N6 59 aa1.8□□□□□ -2.12
VPS53YJL029C YML100W-AQ8TGT0 57 aa1.8□□□□□ -2.12
VPS53YJL029C OST5Q92316 86 aa1.79□□□□□ -2.12
VPS53YJL029C YER188C-AP0C0V2 99 aa1.79□□□□□ -2.12
VPS53YJL029C RPS30AP0CX33 63 aaKnown RBP1.79□□□□□ -2.12
VPS53YJL029C RPS30BP0CX34 63 aaKnown RBP1.79□□□□□ -2.12
VPS53YJL029C YJL144WP47009 104 aa1.79□□□□□ -2.12
VPS53YJL029C YOL166W-AQ8TGJ1 51 aa1.77□□□□□ -2.13
VPS53YJL029C YIL102CP40488 101 aa1.77□□□□□ -2.13
VPS53YJL029C YKL065W-AQ2V2P2 73 aa1.77□□□□□ -2.13
VPS53YJL029C YDR182W-AQ3E796 67 aa1.76□□□□□ -2.13
VPS53YJL029C OLI1P61829 76 aa1.75□□□□□ -2.13
VPS53YJL029C YIL156W-BQ2V2P4 73 aa1.75□□□□□ -2.13
VPS53YJL029C RPS29BP41058 56 aaKnown RBP1.75□□□□□ -2.13
VPS53YJL029C YCR095W-AQ3E787 52 aa1.74□□□□□ -2.13
VPS53YJL029C RPS29AP41057 56 aaKnown RBP1.72□□□□□ -2.13
VPS53YJL029C QCR10P37299 77 aa1.71□□□□□ -2.14
VPS53YJL029C MRX7P53869 86 aa1.71□□□□□ -2.14
VPS53YJL029C HUB1Q6Q546 73 aa1.69□□□□□ -2.14
VPS53YJL029C YMR001C-AQ8TGS9 76 aa1.68□□□□□ -2.14
VPS53YJL029C SOM1Q05676 74 aa1.68□□□□□ -2.14
VPS53YJL029C SDH6Q3E785 79 aa1.68□□□□□ -2.14
VPS53YJL029C YBL044WP38194 122 aa1.67□□□□□ -2.14
VPS53YJL029C YBR201C-AQ2V2Q3 67 aa1.67□□□□□ -2.14
VPS53YJL029C ATP17Q06405 101 aa1.65□□□□□ -2.14
VPS53YJL029C RPL37AP49166 88 aaKnown RBP1.64□□□□□ -2.15
VPS53YJL029C YGL014C-AP0C5N1 53 aa1.61□□□□□ -2.15
VPS53YJL029C YOR394C-AQ8TGJ0 55 aa1.6□□□□□ -2.15
VPS53YJL029C YEL014CP39999 101 aa1.55□□□□□ -2.16
VPS53YJL029C YHR086W-AQ3E746 53 aa1.54□□□□□ -2.16
VPS53YJL029C YCR108CQ3E819 63 aa1.49□□□□□ -2.17
VPS53YJL029C YOR072W-BQ3E832 53 aa1.46□□□□□ -2.18
VPS53YJL029C HHY1P39982 102 aa1.35□□□□□ -2.19
VPS53YJL029C YBR072C-AQ3E794 53 aa1.32□□□□□ -2.2
VPS53YJL029C YHR050W-AQ05451 56 aa1.25□□□□□ -2.21
VPS53YJL029C YOL164W-AQ3E7A5 60 aa1.21□□□□□ -2.22
VPS53YJL029C YLR157W-EP0CF00 54 aa1.03□□□□□ -2.25
Retrieved 63 of 5,963 RNA–protein pairs in 53.2 ms