RNA–Protein interactions for RNA: YIL061C

SNP1, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNP1, Length 903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNP1YIL061C YJR128WP47162 119 aa4.56□□□□□ -1.68
SNP1YIL061C YGR164WP53291 111 aa4.56□□□□□ -1.68
SNP1YIL061C HHF1P02309 103 aaKnown RBP4.55□□□□□ -1.68
SNP1YIL061C YOR316C-AQ3E806 69 aa4.55□□□□□ -1.68
SNP1YIL061C YLR255CO13574 117 aa4.52□□□□□ -1.69
SNP1YIL061C SDH6Q3E785 79 aa4.52□□□□□ -1.69
SNP1YIL061C YGR146C-AQ8TGT9 53 aa4.5□□□□□ -1.69
SNP1YIL061C YNL122CP53921 115 aaPredicted RBP4.49□□□□□ -1.69
SNP1YIL061C YKL065W-AQ2V2P2 73 aa4.47□□□□□ -1.69
SNP1YIL061C YFR032C-BQ8TGU2 87 aa4.47□□□□□ -1.69
SNP1YIL061C YMR001C-AQ8TGS9 76 aa4.46□□□□□ -1.7
SNP1YIL061C COX8P04039 78 aa4.44□□□□□ -1.7
SNP1YIL061C SBH1P52870 82 aa4.44□□□□□ -1.7
SNP1YIL061C HUB1Q6Q546 73 aa4.43□□□□□ -1.7
SNP1YIL061C OST5Q92316 86 aa4.41□□□□□ -1.7
SNP1YIL061C YBR016WP38216 128 aa4.4□□□□□ -1.71
SNP1YIL061C YMR122CQ03879 124 aa4.4□□□□□ -1.71
SNP1YIL061C YOR381W-AQ3E804 55 aa4.4□□□□□ -1.71
SNP1YIL061C YJL144WP47009 104 aa4.39□□□□□ -1.71
SNP1YIL061C YBL008W-AQ3E821 79 aa4.39□□□□□ -1.71
SNP1YIL061C CMC4Q3E7A9 73 aa4.38□□□□□ -1.71
SNP1YIL061C YBR201C-AQ2V2Q3 67 aa4.34□□□□□ -1.71
SNP1YIL061C OLI1P61829 76 aa4.33□□□□□ -1.72
SNP1YIL061C YER188C-AP0C0V2 99 aa4.32□□□□□ -1.72
SNP1YIL061C MRX7P53869 86 aa4.31□□□□□ -1.72
SNP1YIL061C YIL156W-BQ2V2P4 73 aa4.3□□□□□ -1.72
SNP1YIL061C RPL37BP51402 88 aaKnown RBP4.28□□□□□ -1.72
SNP1YIL061C YLR412C-AQ3E742 68 aa4.27□□□□□ -1.73
SNP1YIL061C YCR095W-AQ3E787 52 aa4.24□□□□□ -1.73
SNP1YIL061C FYV12Q08559 129 aa4.21□□□□□ -1.74
SNP1YIL061C ATP17Q06405 101 aa4.17□□□□□ -1.74
SNP1YIL061C Q0017Q9ZZX8 53 aa4.16□□□□□ -1.74
SNP1YIL061C YBR121C-AP0C5L4 52 aa4.12□□□□□ -1.75
SNP1YIL061C RPS28BP0C0X0 67 aaKnown RBP4.11□□□□□ -1.75
SNP1YIL061C RPS28AQ3E7X9 67 aaPredicted RBP4.11□□□□□ -1.75
SNP1YIL061C YGL034CP53186 121 aa4.1□□□□□ -1.75
SNP1YIL061C YJL009WP47078 108 aa4.09□□□□□ -1.75
SNP1YIL061C YBL044WP38194 122 aa4.03□□□□□ -1.76
SNP1YIL061C YOR394C-AQ8TGJ0 55 aa4.03□□□□□ -1.76
SNP1YIL061C YNL277W-AQ3E7Z0 62 aa4.01□□□□□ -1.77
SNP1YIL061C YML054C-AQ3E809 52 aa4□□□□□ -1.77
SNP1YIL061C YDR210WQ03482 75 aa3.95□□□□□ -1.78
SNP1YIL061C YCR108CQ3E819 63 aa3.95□□□□□ -1.78
SNP1YIL061C YEL014CP39999 101 aa3.94□□□□□ -1.78
SNP1YIL061C QCR10P37299 77 aa3.89□□□□□ -1.79
SNP1YIL061C RPL37AP49166 88 aaKnown RBP3.87□□□□□ -1.79
SNP1YIL061C YGL014C-AP0C5N1 53 aa3.81□□□□□ -1.8
SNP1YIL061C YML100W-AQ8TGT0 57 aa3.81□□□□□ -1.8
SNP1YIL061C YER175W-AQ8TGU4 54 aa3.79□□□□□ -1.8
SNP1YIL061C YOR376W-AQ3E805 51 aa3.76□□□□□ -1.81
SNP1YIL061C YOR072W-BQ3E832 53 aa3.7□□□□□ -1.82
SNP1YIL061C SOM1Q05676 74 aa3.67□□□□□ -1.82
SNP1YIL061C HHY1P39982 102 aa3.54□□□□□ -1.84
SNP1YIL061C YBR072C-AQ3E794 53 aa3.5□□□□□ -1.85
SNP1YIL061C RPS29BP41058 56 aaKnown RBP3.3□□□□□ -1.88
SNP1YIL061C RPS29AP41057 56 aaKnown RBP3.14□□□□□ -1.91
SNP1YIL061C YHR050W-AQ05451 56 aa3□□□□□ -1.93
SNP1YIL061C YER078W-AQ3E7A2 54 aa2.95□□□□□ -1.94
SNP1YIL061C YAL067W-AQ8TGK6 75 aa2.75□□□□□ -1.97
SNP1YIL061C YOL164W-AQ3E7A5 60 aa2.68□□□□□ -1.98
SNP1YIL061C YLR157W-EP0CF00 54 aa2.45□□□□□ -2.02
SNP1YIL061C YHR032W-AP0C5N6 59 aa2.26□□□□□ -2.05
SNP1YIL061C YHR086W-AQ3E746 53 aa1.83□□□□□ -2.12
Retrieved 63 of 5,963 RNA–protein pairs in 30.9 ms