RNA–Protein interactions for RNA: YHR150W

PEX28, Transcript of Peroxisomal integral membrane peroxin, yeastyeast

Gene PEX28, Length 1,740 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX28YHR150W SDH6Q3E785 79 aa4.77□□□□□ -1.65
PEX28YHR150W YLR412C-AQ3E742 68 aa4.75□□□□□ -1.65
PEX28YHR150W DDR48P18899 430 aaKnown RBP4.75□□□□□ -1.65
PEX28YHR150W HHF1P02309 103 aaKnown RBP4.74□□□□□ -1.65
PEX28YHR150W YKL065W-AQ2V2P2 73 aa4.74□□□□□ -1.65
PEX28YHR150W YMR001C-AQ8TGS9 76 aa4.72□□□□□ -1.65
PEX28YHR150W RPS28BP0C0X0 67 aaKnown RBP4.72□□□□□ -1.65
PEX28YHR150W RPS28AQ3E7X9 67 aaPredicted RBP4.72□□□□□ -1.65
PEX28YHR150W HUB1Q6Q546 73 aa4.7□□□□□ -1.66
PEX28YHR150W OST5Q92316 86 aa4.69□□□□□ -1.66
PEX28YHR150W YER188C-AP0C0V2 99 aa4.69□□□□□ -1.66
PEX28YHR150W YJR128WP47162 119 aa4.69□□□□□ -1.66
PEX28YHR150W YFR032C-BQ8TGU2 87 aa4.67□□□□□ -1.66
PEX28YHR150W YHR073W-AP0C5N7 58 aa4.65□□□□□ -1.67
PEX28YHR150W YFL067WP43537 175 aa4.63□□□□□ -1.67
PEX28YHR150W YCR095W-AQ3E787 52 aa4.61□□□□□ -1.67
PEX28YHR150W YOR316C-AQ3E806 69 aa4.61□□□□□ -1.67
PEX28YHR150W YGR146C-AQ8TGT9 53 aa4.6□□□□□ -1.67
PEX28YHR150W YLR255CO13574 117 aa4.58□□□□□ -1.68
PEX28YHR150W YNL277W-AQ3E7Z0 62 aa4.58□□□□□ -1.68
PEX28YHR150W COX8P04039 78 aa4.56□□□□□ -1.68
PEX28YHR150W YNL122CP53921 115 aaPredicted RBP4.55□□□□□ -1.68
PEX28YHR150W YBR201C-AQ2V2Q3 67 aa4.55□□□□□ -1.68
PEX28YHR150W YER175W-AQ8TGU4 54 aa4.53□□□□□ -1.68
PEX28YHR150W MDN1Q12019 4910 aaKnown RBP4.51□□□□□ -1.69
PEX28YHR150W YJL144WP47009 104 aa4.5□□□□□ -1.69
PEX28YHR150W YIL156W-BQ2V2P4 73 aa4.5□□□□□ -1.69
PEX28YHR150W YBL008W-AQ3E821 79 aa4.5□□□□□ -1.69
PEX28YHR150W COX7P10174 60 aa4.49□□□□□ -1.69
PEX28YHR150W ATP17Q06405 101 aa4.47□□□□□ -1.69
PEX28YHR150W OLI1P61829 76 aa4.46□□□□□ -1.69
PEX28YHR150W YBR016WP38216 128 aa4.46□□□□□ -1.7
PEX28YHR150W MRX7P53869 86 aa4.43□□□□□ -1.7
PEX28YHR150W FYV12Q08559 129 aa4.42□□□□□ -1.7
PEX28YHR150W RPL37BP51402 88 aaKnown RBP4.39□□□□□ -1.71
PEX28YHR150W YOR376W-AQ3E805 51 aa4.39□□□□□ -1.71
PEX28YHR150W YGL034CP53186 121 aa4.38□□□□□ -1.71
PEX28YHR150W YML100W-AQ8TGT0 57 aa4.34□□□□□ -1.71
PEX28YHR150W CMC4Q3E7A9 73 aa4.31□□□□□ -1.72
PEX28YHR150W YEL014CP39999 101 aa4.24□□□□□ -1.73
PEX28YHR150W YGL014C-AP0C5N1 53 aa4.19□□□□□ -1.74
PEX28YHR150W YCR108CQ3E819 63 aa4.19□□□□□ -1.74
PEX28YHR150W YBL044WP38194 122 aa4.16□□□□□ -1.74
PEX28YHR150W YOR394C-AQ8TGJ0 55 aa4.15□□□□□ -1.74
PEX28YHR150W QCR10P37299 77 aa4.13□□□□□ -1.75
PEX28YHR150W Q0017Q9ZZX8 53 aa4.06□□□□□ -1.76
PEX28YHR150W YJL009WP47078 108 aa4.01□□□□□ -1.77
PEX28YHR150W SOM1Q05676 74 aa4.01□□□□□ -1.77
PEX28YHR150W RPL37AP49166 88 aaKnown RBP3.98□□□□□ -1.77
PEX28YHR150W YML054C-AQ3E809 52 aa3.95□□□□□ -1.78
PEX28YHR150W YOR072W-BQ3E832 53 aa3.84□□□□□ -1.8
PEX28YHR150W YDR210WQ03482 75 aa3.82□□□□□ -1.8
PEX28YHR150W HHY1P39982 102 aa3.78□□□□□ -1.8
PEX28YHR150W YBR072C-AQ3E794 53 aa3.7□□□□□ -1.82
PEX28YHR150W YER078W-AQ3E7A2 54 aa3.67□□□□□ -1.82
PEX28YHR150W YAL067W-AQ8TGK6 75 aa3.67□□□□□ -1.82
PEX28YHR150W YHR032W-AP0C5N6 59 aa3.63□□□□□ -1.83
PEX28YHR150W RPS29BP41058 56 aaKnown RBP3.27□□□□□ -1.89
PEX28YHR150W RPS29AP41057 56 aaKnown RBP3.12□□□□□ -1.91
PEX28YHR150W YHR050W-AQ05451 56 aa3.07□□□□□ -1.92
PEX28YHR150W YOL164W-AQ3E7A5 60 aa3.03□□□□□ -1.92
PEX28YHR150W YHR086W-AQ3E746 53 aa2.89□□□□□ -1.95
PEX28YHR150W YLR157W-EP0CF00 54 aa2.64□□□□□ -1.99
Retrieved 63 of 5,963 RNA–protein pairs in 25.4 ms