RNA–Protein interactions for RNA: YGL172W

NUP49, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP49, Length 1,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP49YGL172W RPL37BP51402 88 aaKnown RBP3.83□□□□□ -1.8
NUP49YGL172W YML100W-AQ8TGT0 57 aa3.83□□□□□ -1.8
NUP49YGL172W YPR153WQ06537 140 aa3.82□□□□□ -1.8
NUP49YGL172W YOR316C-AQ3E806 69 aa3.79□□□□□ -1.8
NUP49YGL172W YOR376W-AQ3E805 51 aa3.78□□□□□ -1.8
NUP49YGL172W YHR125WP38831 101 aa3.77□□□□□ -1.81
NUP49YGL172W YIL102CP40488 101 aa3.77□□□□□ -1.81
NUP49YGL172W FYV12Q08559 129 aa3.77□□□□□ -1.81
NUP49YGL172W YOR314WQ12506 109 aa3.77□□□□□ -1.81
NUP49YGL172W YOL013W-AP0C272 63 aaPredicted RBP3.74□□□□□ -1.81
NUP49YGL172W YJR128WP47162 119 aa3.74□□□□□ -1.81
NUP49YGL172W LIP1Q03579 150 aa3.74□□□□□ -1.81
NUP49YGL172W NOP10Q6Q547 58 aaPredicted RBP3.74□□□□□ -1.81
NUP49YGL172W YJL144WP47009 104 aa3.72□□□□□ -1.81
NUP49YGL172W YDR119W-AQ2V2P9 66 aa3.72□□□□□ -1.81
NUP49YGL172W YPL038W-AQ3E7B4 63 aa3.7□□□□□ -1.82
NUP49YGL172W YHR032W-AP0C5N6 59 aa3.68□□□□□ -1.82
NUP49YGL172W YDR246W-AQ3E763 66 aa3.67□□□□□ -1.82
NUP49YGL172W TOM6P33448 61 aa3.66□□□□□ -1.82
NUP49YGL172W QCR10P37299 77 aa3.65□□□□□ -1.83
NUP49YGL172W YGR146C-AQ8TGT9 53 aa3.65□□□□□ -1.83
NUP49YGL172W Q0017Q9ZZX8 53 aa3.65□□□□□ -1.83
NUP49YGL172W YOL166W-AQ8TGJ1 51 aa3.64□□□□□ -1.83
NUP49YGL172W COX8P04039 78 aa3.63□□□□□ -1.83
NUP49YGL172W AIM4P38305 123 aaPredicted RBP3.63□□□□□ -1.83
NUP49YGL172W YLR255CO13574 117 aa3.62□□□□□ -1.83
NUP49YGL172W SOM1Q05676 74 aa3.61□□□□□ -1.83
NUP49YGL172W YKL065W-AQ2V2P2 73 aa3.61□□□□□ -1.83
NUP49YGL172W YBR016WP38216 128 aa3.61□□□□□ -1.83
NUP49YGL172W YDR182W-AQ3E796 67 aa3.59□□□□□ -1.84
NUP49YGL172W YJL009WP47078 108 aa3.58□□□□□ -1.84
NUP49YGL172W YOR381W-AQ3E804 55 aa3.58□□□□□ -1.84
NUP49YGL172W OLI1P61829 76 aa3.55□□□□□ -1.84
NUP49YGL172W YIL156W-BQ2V2P4 73 aa3.55□□□□□ -1.84
NUP49YGL172W OST5Q92316 86 aa3.53□□□□□ -1.84
NUP49YGL172W RPS30AP0CX33 63 aaKnown RBP3.53□□□□□ -1.85
NUP49YGL172W RPS30BP0CX34 63 aaKnown RBP3.53□□□□□ -1.85
NUP49YGL172W SDH6Q3E785 79 aa3.52□□□□□ -1.85
NUP49YGL172W YDR210WQ03482 75 aa3.5□□□□□ -1.85
NUP49YGL172W YBR201C-AQ2V2Q3 67 aa3.47□□□□□ -1.85
NUP49YGL172W MRX7P53869 86 aa3.44□□□□□ -1.86
NUP49YGL172W YMR001C-AQ8TGS9 76 aa3.44□□□□□ -1.86
NUP49YGL172W YBL044WP38194 122 aa3.41□□□□□ -1.86
NUP49YGL172W YML054C-AQ3E809 52 aa3.41□□□□□ -1.86
NUP49YGL172W HUB1Q6Q546 73 aa3.4□□□□□ -1.87
NUP49YGL172W YER188C-AP0C0V2 99 aa3.36□□□□□ -1.87
NUP49YGL172W YEL014CP39999 101 aa3.35□□□□□ -1.87
NUP49YGL172W YCR095W-AQ3E787 52 aa3.35□□□□□ -1.87
NUP49YGL172W YMR122CQ03879 124 aa3.32□□□□□ -1.88
NUP49YGL172W YOR394C-AQ8TGJ0 55 aa3.26□□□□□ -1.89
NUP49YGL172W ATP17Q06405 101 aa3.2□□□□□ -1.9
NUP49YGL172W YGL014C-AP0C5N1 53 aa3.19□□□□□ -1.9
NUP49YGL172W RPL37AP49166 88 aaKnown RBP3.1□□□□□ -1.91
NUP49YGL172W YHR086W-AQ3E746 53 aa3.1□□□□□ -1.91
NUP49YGL172W YCR108CQ3E819 63 aa3.1□□□□□ -1.91
NUP49YGL172W RPS29BP41058 56 aaKnown RBP3.09□□□□□ -1.92
NUP49YGL172W RPS29AP41057 56 aaKnown RBP3.02□□□□□ -1.93
NUP49YGL172W YOR072W-BQ3E832 53 aa2.95□□□□□ -1.94
NUP49YGL172W HHY1P39982 102 aa2.77□□□□□ -1.97
NUP49YGL172W YBR072C-AQ3E794 53 aa2.63□□□□□ -1.99
NUP49YGL172W YHR050W-AQ05451 56 aa2.43□□□□□ -2.02
NUP49YGL172W YOL164W-AQ3E7A5 60 aa2.29□□□□□ -2.04
NUP49YGL172W YLR157W-EP0CF00 54 aa2.23□□□□□ -2.05
Retrieved 63 of 5,963 RNA–protein pairs in 43 ms