RNA–Protein interactions for RNA: YFL001W

DEG1, Transcript of tRNA:pseudouridine synthase, yeastyeast

Gene DEG1, Length 1,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DEG1YFL001W ATP17Q06405 101 aa2.25□□□□□ -2.05
DEG1YFL001W YNL042W-BQ3E7Z2 85 aa2.25□□□□□ -2.05
DEG1YFL001W YLL066W-BQ8TGJ7 56 aa2.24□□□□□ -2.05
DEG1YFL001W RPS30AP0CX33 63 aaKnown RBP2.23□□□□□ -2.05
DEG1YFL001W RPS30BP0CX34 63 aaKnown RBP2.23□□□□□ -2.05
DEG1YFL001W SHU1P38751 150 aa2.23□□□□□ -2.05
DEG1YFL001W RPC10P40422 70 aa2.23□□□□□ -2.05
DEG1YFL001W YIL102CP40488 101 aa2.23□□□□□ -2.05
DEG1YFL001W YJL009WP47078 108 aa2.23□□□□□ -2.05
DEG1YFL001W YOL097W-AQ3E7Y9 61 aa2.23□□□□□ -2.05
DEG1YFL001W YOL013W-AP0C272 63 aaPredicted RBP2.22□□□□□ -2.05
DEG1YFL001W YDL022C-AP0C5L6 82 aa2.22□□□□□ -2.05
DEG1YFL001W MRPS12P53732 153 aa2.2□□□□□ -2.06
DEG1YFL001W YOL166W-AQ8TGJ1 51 aa2.2□□□□□ -2.06
DEG1YFL001W YDR034C-AP0C289 58 aa2.19□□□□□ -2.06
DEG1YFL001W YOR072WQ08486 104 aa2.19□□□□□ -2.06
DEG1YFL001W EDC1P53080 175 aaPredicted RBP2.18□□□□□ -2.06
DEG1YFL001W YOR034C-AQ3E735 80 aa2.18□□□□□ -2.06
DEG1YFL001W ATP18P81450 59 aa2.17□□□□□ -2.06
DEG1YFL001W YLR255CO13574 117 aa2.17□□□□□ -2.06
DEG1YFL001W YBL039W-BP0C268 59 aa2.17□□□□□ -2.06
DEG1YFL001W MVB12P42939 101 aa2.17□□□□□ -2.06
DEG1YFL001W YLL006W-AQ3E814 58 aa2.17□□□□□ -2.06
DEG1YFL001W RPL29P05747 59 aaPredicted RBP2.16□□□□□ -2.06
DEG1YFL001W YNL190WP53872 204 aa2.16□□□□□ -2.06
DEG1YFL001W SDH6Q3E785 79 aa2.16□□□□□ -2.06
DEG1YFL001W Q0032Q9ZZX7 96 aa2.16□□□□□ -2.06
DEG1YFL001W LCL1Q02786 101 aa2.15□□□□□ -2.07
DEG1YFL001W YBR201C-AQ2V2Q3 67 aa2.15□□□□□ -2.07
DEG1YFL001W YJR107C-AP0CT86 78 aa2.14□□□□□ -2.07
DEG1YFL001W COX7P10174 60 aa2.14□□□□□ -2.07
DEG1YFL001W YLR307C-AQ3E825 87 aa2.13□□□□□ -2.07
DEG1YFL001W YMR001C-AQ8TGS9 76 aa2.13□□□□□ -2.07
DEG1YFL001W YLR157W-DP0CE99 70 aa2.12□□□□□ -2.07
DEG1YFL001W HHY1P39982 102 aa2.11□□□□□ -2.07
DEG1YFL001W RPL37AP49166 88 aaKnown RBP2.1□□□□□ -2.07
DEG1YFL001W DDR2P89113 61 aa2.09□□□□□ -2.08
DEG1YFL001W MDN1Q12019 4910 aaKnown RBP2.09□□□□□ -2.08
DEG1YFL001W YBR230W-AQ3E762 66 aa2.08□□□□□ -2.08
DEG1YFL001W YJL127C-BQ3E828 52 aa2.08□□□□□ -2.08
DEG1YFL001W RPL38P49167 78 aaKnown RBP2.05□□□□□ -2.08
DEG1YFL001W YHR213W-BQ8TGK1 99 aa2.05□□□□□ -2.08
DEG1YFL001W YJR128WP47162 119 aa2.02□□□□□ -2.09
DEG1YFL001W OLI1P61829 76 aa2□□□□□ -2.09
DEG1YFL001W YFR009W-AP0C5M9 85 aa1.99□□□□□ -2.09
DEG1YFL001W YBR072C-AQ3E794 53 aa1.99□□□□□ -2.09
DEG1YFL001W YOR394C-AQ8TGJ0 55 aa1.98□□□□□ -2.09
DEG1YFL001W YJL133C-AQ3E7A3 74 aa1.97□□□□□ -2.09
DEG1YFL001W RPL37BP51402 88 aaKnown RBP1.93□□□□□ -2.1
DEG1YFL001W YHR073W-AP0C5N7 58 aa1.87□□□□□ -2.11
DEG1YFL001W YOR316C-AQ3E806 69 aa1.81□□□□□ -2.12
DEG1YFL001W YGR146C-AQ8TGT9 53 aa1.81□□□□□ -2.12
DEG1YFL001W YBL044WP38194 122 aa1.79□□□□□ -2.12
DEG1YFL001W YCR108CQ3E819 63 aa1.78□□□□□ -2.12
DEG1YFL001W Q0017Q9ZZX8 53 aa1.78□□□□□ -2.12
DEG1YFL001W YBR016WP38216 128 aa1.77□□□□□ -2.13
DEG1YFL001W YLR157W-EP0CF00 54 aa1.75□□□□□ -2.13
DEG1YFL001W YOL164W-AQ3E7A5 60 aa1.67□□□□□ -2.14
DEG1YFL001W YML054C-AQ3E809 52 aa1.67□□□□□ -2.14
DEG1YFL001W YOR072W-BQ3E832 53 aa1.66□□□□□ -2.14
DEG1YFL001W RPS29BP41058 56 aaKnown RBP1.5□□□□□ -2.17
DEG1YFL001W RPS29AP41057 56 aaKnown RBP1.45□□□□□ -2.18
DEG1YFL001W YHR050W-AQ05451 56 aa1.27□□□□□ -2.21
Retrieved 63 of 5,963 RNA–protein pairs in 29.6 ms