RNA–Protein interactions for RNA: YER094C

PUP3, Transcript of Beta 3 subunit of the 20S proteasome, yeastyeast

Gene PUP3, Length 618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP3YER094C YBR121C-AP0C5L4 52 aa4.53□□□□□ -1.68
PUP3YER094C RPS28BP0C0X0 67 aaKnown RBP4.52□□□□□ -1.69
PUP3YER094C YJR128WP47162 119 aa4.52□□□□□ -1.69
PUP3YER094C RPS28AQ3E7X9 67 aaPredicted RBP4.52□□□□□ -1.69
PUP3YER094C YOL166W-AQ8TGJ1 51 aa4.52□□□□□ -1.69
PUP3YER094C YGR164WP53291 111 aa4.51□□□□□ -1.69
PUP3YER094C YDR182W-AQ3E796 67 aa4.51□□□□□ -1.69
PUP3YER094C YHR125WP38831 101 aa4.47□□□□□ -1.69
PUP3YER094C YLR412C-AQ3E742 68 aa4.47□□□□□ -1.69
PUP3YER094C YJL144WP47009 104 aa4.44□□□□□ -1.7
PUP3YER094C COX8P04039 78 aa4.43□□□□□ -1.7
PUP3YER094C YGR146C-AQ8TGT9 53 aa4.43□□□□□ -1.7
PUP3YER094C RPS30AP0CX33 63 aaKnown RBP4.42□□□□□ -1.7
PUP3YER094C RPS30BP0CX34 63 aaKnown RBP4.42□□□□□ -1.7
PUP3YER094C RPL37BP51402 88 aaKnown RBP4.42□□□□□ -1.7
PUP3YER094C YKL065W-AQ2V2P2 73 aa4.42□□□□□ -1.7
PUP3YER094C YLR255CO13574 117 aa4.41□□□□□ -1.7
PUP3YER094C SDH6Q3E785 79 aa4.39□□□□□ -1.71
PUP3YER094C YFR032C-BQ8TGU2 87 aa4.38□□□□□ -1.71
PUP3YER094C YBR016WP38216 128 aa4.35□□□□□ -1.71
PUP3YER094C OLI1P61829 76 aa4.35□□□□□ -1.71
PUP3YER094C YBL008W-AQ3E821 79 aa4.34□□□□□ -1.71
PUP3YER094C YIL156W-BQ2V2P4 73 aa4.31□□□□□ -1.72
PUP3YER094C OST5Q92316 86 aa4.31□□□□□ -1.72
PUP3YER094C Q0017Q9ZZX8 53 aa4.31□□□□□ -1.72
PUP3YER094C YNL277W-AQ3E7Z0 62 aa4.3□□□□□ -1.72
PUP3YER094C FYV12Q08559 129 aa4.29□□□□□ -1.72
PUP3YER094C YBR201C-AQ2V2Q3 67 aa4.29□□□□□ -1.72
PUP3YER094C YMR001C-AQ8TGS9 76 aa4.29□□□□□ -1.72
PUP3YER094C HUB1Q6Q546 73 aa4.25□□□□□ -1.73
PUP3YER094C MRX7P53869 86 aa4.24□□□□□ -1.73
PUP3YER094C YGL034CP53186 121 aa4.23□□□□□ -1.73
PUP3YER094C YOR381W-AQ3E804 55 aa4.23□□□□□ -1.73
PUP3YER094C YJL009WP47078 108 aa4.21□□□□□ -1.74
PUP3YER094C YMR122CQ03879 124 aa4.18□□□□□ -1.74
PUP3YER094C YER188C-AP0C0V2 99 aa4.15□□□□□ -1.75
PUP3YER094C YBL044WP38194 122 aa4.08□□□□□ -1.76
PUP3YER094C YDR210WQ03482 75 aa4.08□□□□□ -1.76
PUP3YER094C YML054C-AQ3E809 52 aa4.08□□□□□ -1.76
PUP3YER094C YCR095W-AQ3E787 52 aa4.06□□□□□ -1.76
PUP3YER094C YML100W-AQ8TGT0 57 aa4.01□□□□□ -1.77
PUP3YER094C YOR394C-AQ8TGJ0 55 aa3.99□□□□□ -1.77
PUP3YER094C ATP17Q06405 101 aa3.98□□□□□ -1.77
PUP3YER094C YOR376W-AQ3E805 51 aa3.96□□□□□ -1.78
PUP3YER094C YEL014CP39999 101 aa3.84□□□□□ -1.79
PUP3YER094C YCR108CQ3E819 63 aa3.83□□□□□ -1.8
PUP3YER094C RPL37AP49166 88 aaKnown RBP3.78□□□□□ -1.8
PUP3YER094C QCR10P37299 77 aa3.76□□□□□ -1.81
PUP3YER094C YGL014C-AP0C5N1 53 aa3.73□□□□□ -1.81
PUP3YER094C YOR072W-BQ3E832 53 aa3.67□□□□□ -1.82
PUP3YER094C SOM1Q05676 74 aa3.66□□□□□ -1.82
PUP3YER094C RPS29BP41058 56 aaKnown RBP3.55□□□□□ -1.84
PUP3YER094C YER175W-AQ8TGU4 54 aa3.51□□□□□ -1.85
PUP3YER094C HHY1P39982 102 aa3.48□□□□□ -1.85
PUP3YER094C RPS29AP41057 56 aaKnown RBP3.44□□□□□ -1.86
PUP3YER094C YBR072C-AQ3E794 53 aa3.36□□□□□ -1.87
PUP3YER094C YER078W-AQ3E7A2 54 aa3.17□□□□□ -1.9
PUP3YER094C YHR050W-AQ05451 56 aa3.01□□□□□ -1.93
PUP3YER094C YHR032W-AP0C5N6 59 aa2.95□□□□□ -1.94
PUP3YER094C YAL067W-AQ8TGK6 75 aa2.73□□□□□ -1.97
PUP3YER094C YOL164W-AQ3E7A5 60 aa2.66□□□□□ -1.98
PUP3YER094C YLR157W-EP0CF00 54 aa2.44□□□□□ -2.02
PUP3YER094C YHR086W-AQ3E746 53 aa2.16□□□□□ -2.06
Retrieved 63 of 5,963 RNA–protein pairs in 10.6 ms