RNA–Protein interactions for RNA: YDL047W

SIT4, Transcript of Type 2A-related serine-threonine phosphatase, yeastyeast

Gene SIT4, Length 936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIT4YDL047W YOR034C-AQ3E735 80 aa3.6□□□□□ -1.83
SIT4YDL047W RPL29P05747 59 aaPredicted RBP3.59□□□□□ -1.83
SIT4YDL047W YNL042W-BQ3E7Z2 85 aa3.59□□□□□ -1.83
SIT4YDL047W YLR236CA0A023PZG4 107 aa3.58□□□□□ -1.84
SIT4YDL047W YLL006W-AQ3E814 58 aa3.58□□□□□ -1.84
SIT4YDL047W YJR085CP47131 105 aaKnown RBP3.57□□□□□ -1.84
SIT4YDL047W ATP17Q06405 101 aa3.57□□□□□ -1.84
SIT4YDL047W YNL162W-AQ3E7A8 72 aa3.56□□□□□ -1.84
SIT4YDL047W DDR2P89113 61 aa3.55□□□□□ -1.84
SIT4YDL047W YBR027CP38220 110 aa3.54□□□□□ -1.84
SIT4YDL047W YIL102CP40488 101 aa3.54□□□□□ -1.84
SIT4YDL047W YHR125WP38831 101 aa3.53□□□□□ -1.84
SIT4YDL047W SDH6Q3E785 79 aa3.53□□□□□ -1.84
SIT4YDL047W YER078W-AQ3E7A2 54 aa3.53□□□□□ -1.84
SIT4YDL047W YFR009W-AP0C5M9 85 aa3.51□□□□□ -1.85
SIT4YDL047W YLR157W-DP0CE99 70 aa3.51□□□□□ -1.85
SIT4YDL047W YMR001C-AQ8TGS9 76 aa3.51□□□□□ -1.85
SIT4YDL047W YNL122CP53921 115 aaPredicted RBP3.5□□□□□ -1.85
SIT4YDL047W YBR230W-AQ3E762 66 aa3.47□□□□□ -1.85
SIT4YDL047W YJL127C-BQ3E828 52 aa3.47□□□□□ -1.85
SIT4YDL047W YGL014C-AP0C5N1 53 aa3.46□□□□□ -1.86
SIT4YDL047W YEL014CP39999 101 aa3.45□□□□□ -1.86
SIT4YDL047W YOL013W-AP0C272 63 aaPredicted RBP3.44□□□□□ -1.86
SIT4YDL047W ECM19Q06011 112 aa3.44□□□□□ -1.86
SIT4YDL047W RPL37BP51402 88 aaKnown RBP3.43□□□□□ -1.86
SIT4YDL047W YHR007C-AQ07074 71 aa3.43□□□□□ -1.86
SIT4YDL047W YMR230W-AQ3E7B5 62 aa3.42□□□□□ -1.86
SIT4YDL047W YHR032W-AP0C5N6 59 aa3.41□□□□□ -1.86
SIT4YDL047W YOR072WQ08486 104 aa3.4□□□□□ -1.87
SIT4YDL047W YDR210WQ03482 75 aa3.39□□□□□ -1.87
SIT4YDL047W COX8P04039 78 aa3.38□□□□□ -1.87
SIT4YDL047W YOL097W-AQ3E7Y9 61 aa3.38□□□□□ -1.87
SIT4YDL047W YHR213W-BQ8TGK1 99 aa3.36□□□□□ -1.87
SIT4YDL047W YJL133C-AQ3E7A3 74 aa3.34□□□□□ -1.87
SIT4YDL047W COX7P10174 60 aa3.32□□□□□ -1.88
SIT4YDL047W YDL012CQ12489 107 aa3.32□□□□□ -1.88
SIT4YDL047W YBR201C-AQ2V2Q3 67 aa3.32□□□□□ -1.88
SIT4YDL047W YAL067W-AQ8TGK6 75 aa3.29□□□□□ -1.88
SIT4YDL047W YAR064WP39563 99 aa3.26□□□□□ -1.89
SIT4YDL047W YLR255CO13574 117 aa3.22□□□□□ -1.89
SIT4YDL047W YJL144WP47009 104 aa3.18□□□□□ -1.9
SIT4YDL047W YOR394C-AQ8TGJ0 55 aa3.18□□□□□ -1.9
SIT4YDL047W Q0017Q9ZZX8 53 aa3.16□□□□□ -1.9
SIT4YDL047W YJR128WP47162 119 aa3.13□□□□□ -1.91
SIT4YDL047W OLI1P61829 76 aa3.13□□□□□ -1.91
SIT4YDL047W YGR146C-AQ8TGT9 53 aa3.1□□□□□ -1.91
SIT4YDL047W YHR073W-AP0C5N7 58 aa3.08□□□□□ -1.92
SIT4YDL047W YJL009WP47078 108 aa3.07□□□□□ -1.92
SIT4YDL047W YBL044WP38194 122 aa3.03□□□□□ -1.92
SIT4YDL047W YCR108CQ3E819 63 aa3.02□□□□□ -1.93
SIT4YDL047W YOR316C-AQ3E806 69 aa2.97□□□□□ -1.93
SIT4YDL047W YBR016WP38216 128 aa2.92□□□□□ -1.94
SIT4YDL047W YBR072C-AQ3E794 53 aa2.91□□□□□ -1.94
SIT4YDL047W RPS29AP41057 56 aaKnown RBP2.88□□□□□ -1.95
SIT4YDL047W RPS29BP41058 56 aaKnown RBP2.87□□□□□ -1.95
SIT4YDL047W HHY1P39982 102 aa2.83□□□□□ -1.96
SIT4YDL047W YML054C-AQ3E809 52 aa2.8□□□□□ -1.96
SIT4YDL047W RPL37AP49166 88 aaKnown RBP2.75□□□□□ -1.97
SIT4YDL047W YOR072W-BQ3E832 53 aa2.75□□□□□ -1.97
SIT4YDL047W YHR086W-AQ3E746 53 aa2.62□□□□□ -1.99
SIT4YDL047W YOL164W-AQ3E7A5 60 aa2.54□□□□□ -2
SIT4YDL047W YLR157W-EP0CF00 54 aa2.32□□□□□ -2.04
SIT4YDL047W YHR050W-AQ05451 56 aa2.14□□□□□ -2.07
Retrieved 63 of 5,963 RNA–protein pairs in 37.8 ms