RNA–Protein interactions for RNA: YBR055C

PRP6, Transcript of Splicing factor, yeastyeast

Gene PRP6, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP6YBR055C YDL022C-AP0C5L6 82 aa0.69□□□□□ -2.3
PRP6YBR055C YJR107C-AP0CT86 78 aa0.69□□□□□ -2.3
PRP6YBR055C YGL258W-AQ3E740 77 aa0.69□□□□□ -2.3
PRP6YBR055C SDH6Q3E785 79 aa0.69□□□□□ -2.3
PRP6YBR055C YOL097W-AQ3E7Y9 61 aa0.69□□□□□ -2.3
PRP6YBR055C QCR9P22289 66 aa0.68□□□□□ -2.3
PRP6YBR055C SPI1P40092 148 aa0.68□□□□□ -2.3
PRP6YBR055C YPR108W-AQ3E7B3 70 aa0.68□□□□□ -2.3
PRP6YBR055C LSM2P38203 95 aaKnown RBP0.67□□□□□ -2.3
PRP6YBR055C YBR016WP38216 128 aa0.66□□□□□ -2.3
PRP6YBR055C YLL066W-BQ8TGJ7 56 aa0.66□□□□□ -2.3
PRP6YBR055C YDR034C-AP0C289 58 aa0.65□□□□□ -2.31
PRP6YBR055C YFR009W-AP0C5M9 85 aa0.63□□□□□ -2.31
PRP6YBR055C RPS29AP41057 56 aaKnown RBP0.63□□□□□ -2.31
PRP6YBR055C YLR342W-AQ3E810 57 aa0.63□□□□□ -2.31
PRP6YBR055C EDC1P53080 175 aaPredicted RBP0.63□□□□□ -2.31
PRP6YBR055C TOM7P53507 60 aa0.63□□□□□ -2.31
PRP6YBR055C PAI3P01094 68 aa0.62□□□□□ -2.31
PRP6YBR055C PMP3P87284 55 aa0.62□□□□□ -2.31
PRP6YBR055C ATP17Q06405 101 aa0.62□□□□□ -2.31
PRP6YBR055C YOR192C-CQ3E736 78 aa0.62□□□□□ -2.31
PRP6YBR055C YOR011W-AQ3E807 68 aa0.62□□□□□ -2.31
PRP6YBR055C Q0017Q9ZZX8 53 aa0.6□□□□□ -2.31
PRP6YBR055C YFL041W-AQ3E817 63 aa0.6□□□□□ -2.31
PRP6YBR055C YBR200W-AQ3E755 54 aa0.59□□□□□ -2.32
PRP6YBR055C YIL134C-AQ45U18 67 aa0.58□□□□□ -2.32
PRP6YBR055C ATX1P38636 73 aa0.58□□□□□ -2.32
PRP6YBR055C PAU7P39545 55 aa0.58□□□□□ -2.32
PRP6YBR055C SSS1P35179 80 aa0.57□□□□□ -2.32
PRP6YBR055C YKL023C-AQ2V2P3 75 aa0.57□□□□□ -2.32
PRP6YBR055C RPL29P05747 59 aaPredicted RBP0.56□□□□□ -2.32
PRP6YBR055C YBL039W-BP0C268 59 aa0.56□□□□□ -2.32
PRP6YBR055C YGR025WP53216 100 aa0.55□□□□□ -2.32
PRP6YBR055C YDR246W-AQ3E763 66 aa0.54□□□□□ -2.32
PRP6YBR055C COA2Q3E823 68 aa0.54□□□□□ -2.32
PRP6YBR055C TOS6P48560 102 aa0.53□□□□□ -2.32
PRP6YBR055C YBL044WP38194 122 aa0.52□□□□□ -2.33
PRP6YBR055C YLR146W-AQ2V2P1 62 aa0.51□□□□□ -2.33
PRP6YBR055C YOR008C-AQ3E7B9 74 aa0.51□□□□□ -2.33
PRP6YBR055C DDR2P89113 61 aa0.5□□□□□ -2.33
PRP6YBR055C YML054C-AQ3E809 52 aa0.5□□□□□ -2.33
PRP6YBR055C YLR157W-DP0CE99 70 aa0.49□□□□□ -2.33
PRP6YBR055C YSY6P38374 65 aa0.49□□□□□ -2.33
PRP6YBR055C HUB1Q6Q546 73 aa0.49□□□□□ -2.33
PRP6YBR055C YHR073W-AP0C5N7 58 aa0.48□□□□□ -2.33
PRP6YBR055C YBR230W-AQ3E762 66 aa0.48□□□□□ -2.33
PRP6YBR055C YDR182W-AQ3E796 67 aa0.48□□□□□ -2.33
PRP6YBR055C YOR394C-AQ8TGJ0 55 aa0.48□□□□□ -2.33
PRP6YBR055C YLL006W-AQ3E814 58 aa0.47□□□□□ -2.33
PRP6YBR055C OLI1P61829 76 aa0.46□□□□□ -2.34
PRP6YBR055C YIL102C-AQ2V2P5 75 aa0.46□□□□□ -2.34
PRP6YBR055C YJL127C-BQ3E828 52 aa0.46□□□□□ -2.34
PRP6YBR055C YCR108CQ3E819 63 aa0.46□□□□□ -2.34
PRP6YBR055C RPS30AP0CX33 63 aaKnown RBP0.45□□□□□ -2.34
PRP6YBR055C RPS30BP0CX34 63 aaKnown RBP0.45□□□□□ -2.34
PRP6YBR055C YJL133C-AQ3E7A3 74 aa0.41□□□□□ -2.34
PRP6YBR055C VMA9Q3E7B6 73 aa0.41□□□□□ -2.34
PRP6YBR055C YOL166W-AQ8TGJ1 51 aa0.4□□□□□ -2.35
PRP6YBR055C YOR316C-AQ3E806 69 aa0.38□□□□□ -2.35
PRP6YBR055C YMR001C-AQ8TGS9 76 aa0.36□□□□□ -2.35
PRP6YBR055C YGR146C-AQ8TGT9 53 aa0.34□□□□□ -2.35
PRP6YBR055C YOR072W-BQ3E832 53 aa0.29□□□□□ -2.36
PRP6YBR055C YHR050W-AQ05451 56 aa0.29□□□□□ -2.36
Retrieved 63 of 5,963 RNA–protein pairs in 43.6 ms