RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 CTNNA1P35221 906 aaKnown RBP18.08■□□□□ 0.48
PHGDH-234ENST00000642041 SCNN1AP37088 669 aa18.08■□□□□ 0.48
PHGDH-234ENST00000642041 ACADSBP45954 432 aa18.08■□□□□ 0.48
PHGDH-234ENST00000642041 GABRB2P47870 512 aa18.08■□□□□ 0.48
PHGDH-234ENST00000642041 ALDH7A1P49419 539 aaKnown RBP18.08■□□□□ 0.48
PHGDH-234ENST00000642041 DMWDQ09019 674 aa18.08■□□□□ 0.48
PHGDH-234ENST00000642041 ELF2Q15723 593 aa18.08■□□□□ 0.48
PHGDH-234ENST00000642041 ARHGAP17Q68EM7 881 aa18.08■□□□□ 0.48
PHGDH-234ENST00000642041 ECHDC2Q86YB7 292 aa18.08■□□□□ 0.48
PHGDH-234ENST00000642041 PALB2Q86YC2 1186 aa18.08■□□□□ 0.48
PHGDH-234ENST00000642041 SLC4A11Q8NBS3 891 aa18.08■□□□□ 0.48
PHGDH-234ENST00000642041 C1orf131Q8NDD1 294 aaKnown RBP18.08■□□□□ 0.48
PHGDH-234ENST00000642041 PJA1Q8NG27 643 aa18.08■□□□□ 0.48
PHGDH-234ENST00000642041 CPA5Q8WXQ8 436 aa18.08■□□□□ 0.48
PHGDH-234ENST00000642041 ARHGEF26Q96DR7 871 aa18.08■□□□□ 0.48
PHGDH-234ENST00000642041 TMEM169Q96HH4 297 aa18.08■□□□□ 0.48
PHGDH-234ENST00000642041 SLITRK6Q9H5Y7 841 aa18.08■□□□□ 0.48
PHGDH-234ENST00000642041 SYNCQ9H7C4 482 aa18.08■□□□□ 0.48
PHGDH-234ENST00000642041 ARFGAP3Q9NP61 516 aa18.08■□□□□ 0.48
PHGDH-234ENST00000642041 EPS15L1Q9UBC2 864 aa18.08■□□□□ 0.48
PHGDH-234ENST00000642041 ANAPC7Q9UJX3 599 aa18.08■□□□□ 0.48
PHGDH-234ENST00000642041 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.08■□□□□ 0.48
PHGDH-234ENST00000642041 SMG5Q9UPR3 1016 aaKnown RBP18.08■□□□□ 0.48
PHGDH-234ENST00000642041 HES2Q9Y543 173 aa18.08■□□□□ 0.48
PHGDH-234ENST00000642041 CARNS1A5YM72 827 aa18.07■□□□□ 0.48
PHGDH-234ENST00000642041 SIGLEC16A6NMB1 481 aa18.07■□□□□ 0.48
PHGDH-234ENST00000642041 H2AFXP16104 143 aaPredicted RBP18.07■□□□□ 0.48
PHGDH-234ENST00000642041 WARSP23381 471 aaKnown RBP18.07■□□□□ 0.48
PHGDH-234ENST00000642041 GBP1P32455 592 aa18.07■□□□□ 0.48
PHGDH-234ENST00000642041 GRIK3Q13003 919 aa18.07■□□□□ 0.48
PHGDH-234ENST00000642041 MESDQ14696 234 aa18.07■□□□□ 0.48
PHGDH-234ENST00000642041 DNAJC24Q6P3W2 148 aa18.07■□□□□ 0.48
PHGDH-234ENST00000642041 DCUN1D2Q6PH85 259 aa18.07■□□□□ 0.48
PHGDH-234ENST00000642041 DCLRE1AQ6PJP8 1040 aa18.07■□□□□ 0.48
PHGDH-234ENST00000642041 ARCQ7LC44 396 aa18.07■□□□□ 0.48
PHGDH-234ENST00000642041 LIMS2Q7Z4I7 341 aa18.07■□□□□ 0.48
PHGDH-234ENST00000642041 GPIHBP1Q8IV16 184 aa18.07■□□□□ 0.48
PHGDH-234ENST00000642041 RHOT1Q8IXI2 618 aa18.07■□□□□ 0.48
PHGDH-234ENST00000642041 CAPZA3Q96KX2 299 aa18.07■□□□□ 0.48
PHGDH-234ENST00000642041 PPP1R10Q96QC0 940 aaKnown RBP18.07■□□□□ 0.48
PHGDH-234ENST00000642041 ZSWIM1Q9BR11 485 aa18.07■□□□□ 0.48
PHGDH-234ENST00000642041 EPC1Q9H2F5 836 aa18.07■□□□□ 0.48
PHGDH-234ENST00000642041 RSAD1Q9HA92 442 aa18.07■□□□□ 0.48
PHGDH-234ENST00000642041 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.07■□□□□ 0.48
PHGDH-234ENST00000642041 ZFYVE26Q68DK2 2539 aa18.07■□□□□ 0.48
PHGDH-234ENST00000642041 ASPMQ8IZT6 3477 aa18.07■□□□□ 0.48
PHGDH-234ENST00000642041 PDCD11Q14690 1871 aaKnown RBP18.06■□□□□ 0.48
PHGDH-234ENST00000642041 SPDYE4A6NLX3 237 aa18.06■□□□□ 0.48
PHGDH-234ENST00000642041 NT5C1B-RDH14C9J2C7 533 aa18.06■□□□□ 0.48
PHGDH-234ENST00000642041 LAMTOR5O43504 91 aa18.06■□□□□ 0.48
PHGDH-234ENST00000642041 ERBB2P04626 1255 aa18.06■□□□□ 0.48
PHGDH-234ENST00000642041 COMTP21964 271 aa18.06■□□□□ 0.48
PHGDH-234ENST00000642041 RRM1P23921 792 aa18.06■□□□□ 0.48
PHGDH-234ENST00000642041 AKAP5P24588 427 aa18.06■□□□□ 0.48
PHGDH-234ENST00000642041 GNL1P36915 607 aaPredicted RBP18.06■□□□□ 0.48
PHGDH-234ENST00000642041 NDST1P52848 882 aa18.06■□□□□ 0.48
PHGDH-234ENST00000642041 BCAR1P56945 870 aa18.06■□□□□ 0.48
PHGDH-234ENST00000642041 COPS2P61201 443 aa18.06■□□□□ 0.48
PHGDH-234ENST00000642041 MAMLD1Q13495 774 aa18.06■□□□□ 0.48
PHGDH-234ENST00000642041 HADHQ16836 314 aaKnown RBP18.06■□□□□ 0.48
PHGDH-234ENST00000642041 NIPA2Q8N8Q9 360 aa18.06■□□□□ 0.48
PHGDH-234ENST00000642041 RNF169Q8NCN4 708 aa18.06■□□□□ 0.48
PHGDH-234ENST00000642041 ZBTB44Q8NCP5 570 aa18.06■□□□□ 0.48
PHGDH-234ENST00000642041 HSFY1Q96LI6 401 aa18.06■□□□□ 0.48
PHGDH-234ENST00000642041 ZMAT2Q96NC0 199 aaKnown RBP18.06■□□□□ 0.48
PHGDH-234ENST00000642041 PARD6BQ9BYG5 372 aa18.06■□□□□ 0.48
PHGDH-234ENST00000642041 FOXQ1Q9C009 403 aa18.06■□□□□ 0.48
PHGDH-234ENST00000642041 ACBD3Q9H3P7 528 aa18.06■□□□□ 0.48
PHGDH-234ENST00000642041 DDX56Q9NY93 547 aaKnown RBP18.06■□□□□ 0.48
PHGDH-234ENST00000642041 POLIQ9UNA4 740 aa18.06■□□□□ 0.48
PHGDH-234ENST00000642041 DOCK8Q8NF50 2099 aa18.05■□□□□ 0.48
PHGDH-234ENST00000642041 A8MXQ7 604 aa18.05■□□□□ 0.48
PHGDH-234ENST00000642041 O00370 1275 aa18.05■□□□□ 0.48
PHGDH-234ENST00000642041 SLC30A4O14863 429 aa18.05■□□□□ 0.48
PHGDH-234ENST00000642041 MEFVO15553 781 aaPredicted RBP18.05■□□□□ 0.48
PHGDH-234ENST00000642041 TBC1D4O60343 1298 aa18.05■□□□□ 0.48
PHGDH-234ENST00000642041 LILRB5O75023 590 aa18.05■□□□□ 0.48
PHGDH-234ENST00000642041 SRGAP2O75044 1071 aa18.05■□□□□ 0.48
PHGDH-234ENST00000642041 HOXB3P14651 431 aaPredicted RBP18.05■□□□□ 0.48
PHGDH-234ENST00000642041 BRD2P25440 801 aaKnown RBP18.05■□□□□ 0.48
PHGDH-234ENST00000642041 GBP2P32456 591 aaPredicted RBP18.05■□□□□ 0.48
PHGDH-234ENST00000642041 STARD6P59095 220 aa18.05■□□□□ 0.48
PHGDH-234ENST00000642041 LILRA4P59901 499 aa18.05■□□□□ 0.48
PHGDH-234ENST00000642041 GPS2Q13227 327 aa18.05■□□□□ 0.48
PHGDH-234ENST00000642041 ZNF394Q53GI3 561 aa18.05■□□□□ 0.48
PHGDH-234ENST00000642041 ODF2Q5BJF6 829 aa18.05■□□□□ 0.48
PHGDH-234ENST00000642041 CLLU1OSQ5K130 101 aa18.05■□□□□ 0.48
PHGDH-234ENST00000642041 C8orf74Q6P047 294 aa18.05■□□□□ 0.48
PHGDH-234ENST00000642041 SCARA5Q6ZMJ2 495 aa18.05■□□□□ 0.48
PHGDH-234ENST00000642041 DDX53Q86TM3 631 aaKnown RBP18.05■□□□□ 0.48
PHGDH-234ENST00000642041 ZNF598Q86UK7 904 aaKnown RBP18.05■□□□□ 0.48
PHGDH-234ENST00000642041 METTL23Q86XA0 190 aa18.05■□□□□ 0.48
PHGDH-234ENST00000642041 IFT20Q8IY31 132 aa18.05■□□□□ 0.48
PHGDH-234ENST00000642041 CMASQ8NFW8 434 aaPredicted RBP18.05■□□□□ 0.48
PHGDH-234ENST00000642041 OR6B3Q8NGW1 331 aa18.05■□□□□ 0.48
PHGDH-234ENST00000642041 WHAMMQ8TF30 809 aa18.05■□□□□ 0.48
PHGDH-234ENST00000642041 COG1Q8WTW3 980 aa18.05■□□□□ 0.48
PHGDH-234ENST00000642041 COL26A1Q96A83 441 aa18.05■□□□□ 0.48
PHGDH-234ENST00000642041 C11orf70Q9BRQ4 267 aa18.05■□□□□ 0.48
PHGDH-234ENST00000642041 FAM129AQ9BZQ8 928 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms