RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 GFRA2O00451 464 aa11.75□□□□□ -0.53
PTP4A1-207ENST00000639568 OGTO15294 1046 aa11.75□□□□□ -0.53
PTP4A1-207ENST00000639568 KLK10O43240 276 aa11.75□□□□□ -0.53
PTP4A1-207ENST00000639568 MBL2P11226 248 aaPredicted RBP11.75□□□□□ -0.53
PTP4A1-207ENST00000639568 LIG4P49917 911 aa11.75□□□□□ -0.53
PTP4A1-207ENST00000639568 CFAP221Q4G0U5 840 aa11.75□□□□□ -0.53
PTP4A1-207ENST00000639568 INTS6LQ5JSJ4 861 aaKnown RBP11.75□□□□□ -0.53
PTP4A1-207ENST00000639568 FBXL19Q6PCT2 694 aa11.75□□□□□ -0.53
PTP4A1-207ENST00000639568 WASF1Q92558 559 aa11.75□□□□□ -0.53
PTP4A1-207ENST00000639568 PRCCQ92733 491 aaPredicted RBP11.75□□□□□ -0.53
PTP4A1-207ENST00000639568 FUBP3Q96I24 572 aaKnown RBP eCLIP11.75□□□□□ -0.53
PTP4A1-207ENST00000639568 ZNF578Q96N58 590 aaPredicted RBP11.75□□□□□ -0.53
PTP4A1-207ENST00000639568 XPO6Q96QU8 1125 aaKnown RBP11.75□□□□□ -0.53
PTP4A1-207ENST00000639568 CCSER1Q9C0I3 900 aa11.75□□□□□ -0.53
PTP4A1-207ENST00000639568 HAPLN2Q9GZV7 340 aa11.75□□□□□ -0.53
PTP4A1-207ENST00000639568 TMEM60Q9H2L4 133 aa11.75□□□□□ -0.53
PTP4A1-207ENST00000639568 SPHK2Q9NRA0 654 aa11.75□□□□□ -0.53
PTP4A1-207ENST00000639568 DDX19AQ9NUU7 478 aaKnown RBP11.75□□□□□ -0.53
PTP4A1-207ENST00000639568 DNAJC17Q9NVM6 304 aaKnown RBP11.75□□□□□ -0.53
PTP4A1-207ENST00000639568 DDX43Q9NXZ2 648 aaKnown RBP11.75□□□□□ -0.53
PTP4A1-207ENST00000639568 DPP3Q9NY33 737 aa11.75□□□□□ -0.53
PTP4A1-207ENST00000639568 DNM3Q9UQ16 869 aa11.75□□□□□ -0.53
PTP4A1-207ENST00000639568 CLCA2Q9UQC9 943 aa11.75□□□□□ -0.53
PTP4A1-207ENST00000639568 SH3BP1Q9Y3L3 701 aa11.75□□□□□ -0.53
PTP4A1-207ENST00000639568 SNX14Q9Y5W7 946 aa11.75□□□□□ -0.53
PTP4A1-207ENST00000639568 KNTC1P50748 2209 aa11.75□□□□□ -0.53
PTP4A1-207ENST00000639568 ANKRD17O75179 2603 aaKnown RBP11.74□□□□□ -0.53
PTP4A1-207ENST00000639568 FLNCQ14315 2725 aa11.74□□□□□ -0.53
PTP4A1-207ENST00000639568 COL5A1P20908 1838 aaPredicted RBP11.74□□□□□ -0.53
PTP4A1-207ENST00000639568 ZNF638Q14966 1978 aaKnown RBP11.74□□□□□ -0.53
PTP4A1-207ENST00000639568 KCNJ18B7U540 433 aa11.74□□□□□ -0.53
PTP4A1-207ENST00000639568 TRIM66O15016 1216 aa11.74□□□□□ -0.53
PTP4A1-207ENST00000639568 TRIM24O15164 1050 aa11.74□□□□□ -0.53
PTP4A1-207ENST00000639568 SYNCRIPO60506 623 aaKnown RBP11.74□□□□□ -0.53
PTP4A1-207ENST00000639568 HUS1O60921 280 aa11.74□□□□□ -0.53
PTP4A1-207ENST00000639568 ITGAVP06756 1048 aa11.74□□□□□ -0.53
PTP4A1-207ENST00000639568 ADRB2P07550 413 aa11.74□□□□□ -0.53
PTP4A1-207ENST00000639568 MAPTP10636 758 aaKnown RBP11.74□□□□□ -0.53
PTP4A1-207ENST00000639568 ABCB4P21439 1286 aa11.74□□□□□ -0.53
PTP4A1-207ENST00000639568 ACAT1P24752 427 aaKnown RBP11.74□□□□□ -0.53
PTP4A1-207ENST00000639568 ANXA13P27216 316 aa11.74□□□□□ -0.53
PTP4A1-207ENST00000639568 GRIA4P48058 902 aa11.74□□□□□ -0.53
PTP4A1-207ENST00000639568 C21orf59P57076 290 aa11.74□□□□□ -0.53
PTP4A1-207ENST00000639568 FUT11Q495W5 492 aa11.74□□□□□ -0.53
PTP4A1-207ENST00000639568 C4orf50Q6ZRC1 276 aa11.74□□□□□ -0.53
PTP4A1-207ENST00000639568 DENND5BQ6ZUT9 1274 aa11.74□□□□□ -0.53
PTP4A1-207ENST00000639568 TMEM25Q86YD3 366 aa11.74□□□□□ -0.53
PTP4A1-207ENST00000639568 TMEM161BQ8NDZ6 487 aa11.74□□□□□ -0.53
PTP4A1-207ENST00000639568 C1orf216Q8TAB5 229 aa11.74□□□□□ -0.53
PTP4A1-207ENST00000639568 KCNE4Q8WWG9 221 aa11.74□□□□□ -0.53
PTP4A1-207ENST00000639568 SIPA1Q96FS4 1042 aa11.74□□□□□ -0.53
PTP4A1-207ENST00000639568 SPATA17Q96L03 361 aa11.74□□□□□ -0.53
PTP4A1-207ENST00000639568 LARP6Q9BRS8 491 aaKnown RBP11.74□□□□□ -0.53
PTP4A1-207ENST00000639568 DPH1Q9BZG8 443 aa11.74□□□□□ -0.53
PTP4A1-207ENST00000639568 PCED1AQ9H1Q7 454 aa11.74□□□□□ -0.53
PTP4A1-207ENST00000639568 TM9SF3Q9HD45 589 aa11.74□□□□□ -0.53
PTP4A1-207ENST00000639568 PAXBP1Q9Y5B6 917 aa11.74□□□□□ -0.53
PTP4A1-207ENST00000639568 WASH3PC4AMC7 463 aa11.73□□□□□ -0.53
PTP4A1-207ENST00000639568 H0YCG3 227 aa11.73□□□□□ -0.53
PTP4A1-207ENST00000639568 CBX4O00257 560 aa11.73□□□□□ -0.53
PTP4A1-207ENST00000639568 TULP1O00294 542 aaPredicted RBP11.73□□□□□ -0.53
PTP4A1-207ENST00000639568 WNT7AO00755 349 aa11.73□□□□□ -0.53
PTP4A1-207ENST00000639568 TERTO14746 1132 aaKnown RBP11.73□□□□□ -0.53
PTP4A1-207ENST00000639568 HNRNPDLO14979 420 aaKnown RBP11.73□□□□□ -0.53
PTP4A1-207ENST00000639568 PLS3P13797 630 aa11.73□□□□□ -0.53
PTP4A1-207ENST00000639568 PNPLA4P41247 253 aa11.73□□□□□ -0.53
PTP4A1-207ENST00000639568 MAGEA11P43364 429 aa11.73□□□□□ -0.53
PTP4A1-207ENST00000639568 ACADVLP49748 655 aa11.73□□□□□ -0.53
PTP4A1-207ENST00000639568 ORC1Q13415 861 aa11.73□□□□□ -0.53
PTP4A1-207ENST00000639568 TOB2Q14106 344 aaPredicted RBP11.73□□□□□ -0.53
PTP4A1-207ENST00000639568 UBAP2LQ14157 1087 aaKnown RBP11.73□□□□□ -0.53
PTP4A1-207ENST00000639568 ECM1Q16610 540 aa11.73□□□□□ -0.53
PTP4A1-207ENST00000639568 FAM124AQ86V42 546 aa11.73□□□□□ -0.53
PTP4A1-207ENST00000639568 GATAD2AQ86YP4 633 aa11.73□□□□□ -0.53
PTP4A1-207ENST00000639568 TMPRSS6Q8IU80 811 aa11.73□□□□□ -0.53
PTP4A1-207ENST00000639568 LSMEM2Q8N112 164 aa11.73□□□□□ -0.53
PTP4A1-207ENST00000639568 PDCL2Q8N4E4 241 aa11.73□□□□□ -0.53
PTP4A1-207ENST00000639568 SNRNP27Q8WVK2 155 aaKnown RBP11.73□□□□□ -0.53
PTP4A1-207ENST00000639568 TNFRSF25Q93038 417 aa11.73□□□□□ -0.53
PTP4A1-207ENST00000639568 CEP295NLQ96MC4 621 aa11.73□□□□□ -0.53
PTP4A1-207ENST00000639568 ZNF560Q96MR9 790 aa11.73□□□□□ -0.53
PTP4A1-207ENST00000639568 MSTO1Q9BUK6 570 aa11.73□□□□□ -0.53
PTP4A1-207ENST00000639568 TIPINQ9BVW5 301 aa11.73□□□□□ -0.53
PTP4A1-207ENST00000639568 MKRN2Q9H000 416 aaKnown RBP11.73□□□□□ -0.53
PTP4A1-207ENST00000639568 ASB7Q9H672 318 aa11.73□□□□□ -0.53
PTP4A1-207ENST00000639568 KCNK4Q9NYG8 393 aa11.73□□□□□ -0.53
PTP4A1-207ENST00000639568 MAGEC2Q9UBF1 373 aaPredicted RBP11.73□□□□□ -0.53
PTP4A1-207ENST00000639568 C2CD2Q9Y426 696 aa11.73□□□□□ -0.53
PTP4A1-207ENST00000639568 PRRT4C9JH25 899 aa11.72□□□□□ -0.53
PTP4A1-207ENST00000639568 NEDD8-MDP1E9PL57 170 aa11.72□□□□□ -0.53
PTP4A1-207ENST00000639568 PAPSS1O43252 624 aaPredicted RBP11.72□□□□□ -0.53
PTP4A1-207ENST00000639568 OLFM2O95897 454 aa11.72□□□□□ -0.53
PTP4A1-207ENST00000639568 OAS1P00973 400 aaKnown RBP11.72□□□□□ -0.53
PTP4A1-207ENST00000639568 OR52Z1P0C646 297 aa11.72□□□□□ -0.53
PTP4A1-207ENST00000639568 PCSK1P29120 753 aa11.72□□□□□ -0.53
PTP4A1-207ENST00000639568 ZNF132P52740 706 aa11.72□□□□□ -0.53
PTP4A1-207ENST00000639568 USP46P62068 366 aa11.72□□□□□ -0.53
PTP4A1-207ENST00000639568 MAPK7Q13164 816 aa11.72□□□□□ -0.53
PTP4A1-207ENST00000639568 ILKQ13418 452 aa11.72□□□□□ -0.53
PTP4A1-207ENST00000639568 SERINC3Q13530 473 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 209.4 ms