RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 AREL1O15033 823 aa12.15□□□□□ -0.46
LINC00538-201ENST00000626109 IQCF3P0C7M6 154 aa12.15□□□□□ -0.46
LINC00538-201ENST00000626109 FAM228BP0C875 321 aa12.15□□□□□ -0.46
LINC00538-201ENST00000626109 RAG1P15918 1043 aa12.15□□□□□ -0.46
LINC00538-201ENST00000626109 SOX9P48436 509 aa12.15□□□□□ -0.46
LINC00538-201ENST00000626109 FAM187BQ17R55 369 aa12.15□□□□□ -0.46
LINC00538-201ENST00000626109 SYCE1Q8N0S2 351 aa12.15□□□□□ -0.46
LINC00538-201ENST00000626109 ADAM33Q9BZ11 813 aa12.15□□□□□ -0.46
LINC00538-201ENST00000626109 IFT80Q9P2H3 777 aaPredicted RBP12.15□□□□□ -0.46
LINC00538-201ENST00000626109 RSPH14Q9UHP6 348 aa12.15□□□□□ -0.46
LINC00538-201ENST00000626109 NOC2LQ9Y3T9 749 aaKnown RBP12.15□□□□□ -0.46
LINC00538-201ENST00000626109 ANGPTL3Q9Y5C1 460 aa12.15□□□□□ -0.46
LINC00538-201ENST00000626109 CNTNAP2Q9UHC6 1331 aa12.15□□□□□ -0.46
LINC00538-201ENST00000626109 HNRNPDLO14979 420 aaKnown RBP12.15□□□□□ -0.46
LINC00538-201ENST00000626109 EVI5O60447 810 aa12.15□□□□□ -0.46
LINC00538-201ENST00000626109 HEXIM1O94992 359 aaKnown RBP12.15□□□□□ -0.46
LINC00538-201ENST00000626109 TGDSO95455 350 aa12.15□□□□□ -0.46
LINC00538-201ENST00000626109 FTCDO95954 541 aa12.15□□□□□ -0.46
LINC00538-201ENST00000626109 PAHP00439 452 aa12.15□□□□□ -0.46
LINC00538-201ENST00000626109 FGFR4P22455 802 aa12.15□□□□□ -0.46
LINC00538-201ENST00000626109 CYP2C18P33260 490 aa12.15□□□□□ -0.46
LINC00538-201ENST00000626109 PRKCIP41743 596 aa12.15□□□□□ -0.46
LINC00538-201ENST00000626109 NOP2P46087 812 aaKnown RBP12.15□□□□□ -0.46
LINC00538-201ENST00000626109 LIG4P49917 911 aa12.15□□□□□ -0.46
LINC00538-201ENST00000626109 CCL23P55773 120 aa12.15□□□□□ -0.46
LINC00538-201ENST00000626109 LPIN1Q14693 890 aa12.15□□□□□ -0.46
LINC00538-201ENST00000626109 POMZP3Q6PJE2 187 aa12.15□□□□□ -0.46
LINC00538-201ENST00000626109 IRF2BP2Q7Z5L9 587 aa12.15□□□□□ -0.46
LINC00538-201ENST00000626109 FAM228AQ86W67 206 aa12.15□□□□□ -0.46
LINC00538-201ENST00000626109 MREGQ8N565 214 aa12.15□□□□□ -0.46
LINC00538-201ENST00000626109 ZNF540Q8NDQ6 660 aa12.15□□□□□ -0.46
LINC00538-201ENST00000626109 RIN2Q8WYP3 895 aaPredicted RBP12.15□□□□□ -0.46
LINC00538-201ENST00000626109 KCTD13Q8WZ19 329 aa12.15□□□□□ -0.46
LINC00538-201ENST00000626109 CLIP3Q96DZ5 547 aa12.15□□□□□ -0.46
LINC00538-201ENST00000626109 EAF1Q96JC9 268 aaPredicted RBP12.15□□□□□ -0.46
LINC00538-201ENST00000626109 WNT8AQ9H1J5 351 aa12.15□□□□□ -0.46
LINC00538-201ENST00000626109 EPB41L5Q9HCM4 733 aa12.15□□□□□ -0.46
LINC00538-201ENST00000626109 PPT2Q9UMR5 302 aa12.15□□□□□ -0.46
LINC00538-201ENST00000626109 SIP14410 1827 aa12.14□□□□□ -0.47
LINC00538-201ENST00000626109 A0A0A6YYK5 440 aaPredicted RBP12.14□□□□□ -0.47
LINC00538-201ENST00000626109 TRIM43BA6NCK2 446 aa12.14□□□□□ -0.47
LINC00538-201ENST00000626109 TSPAN1O60635 241 aa12.14□□□□□ -0.47
LINC00538-201ENST00000626109 TIMP1P01033 207 aa12.14□□□□□ -0.47
LINC00538-201ENST00000626109 NR3C1P04150 777 aa12.14□□□□□ -0.47
LINC00538-201ENST00000626109 KRT1P04264 644 aa12.14□□□□□ -0.47
LINC00538-201ENST00000626109 CYP11A1P05108 521 aa12.14□□□□□ -0.47
LINC00538-201ENST00000626109 FERP16591 822 aa12.14□□□□□ -0.47
LINC00538-201ENST00000626109 PON1P27169 355 aa12.14□□□□□ -0.47
LINC00538-201ENST00000626109 AXLP30530 894 aa12.14□□□□□ -0.47
LINC00538-201ENST00000626109 CD52P31358 61 aa12.14□□□□□ -0.47
LINC00538-201ENST00000626109 MTHFRP42898 656 aa12.14□□□□□ -0.47
LINC00538-201ENST00000626109 AP2B1P63010 937 aa12.14□□□□□ -0.47
LINC00538-201ENST00000626109 GUCY2DQ02846 1103 aa12.14□□□□□ -0.47
LINC00538-201ENST00000626109 SMAD4Q13485 552 aaKnown RBP12.14□□□□□ -0.47
LINC00538-201ENST00000626109 SLC14A2Q15849 920 aa12.14□□□□□ -0.47
LINC00538-201ENST00000626109 PLA2G4EQ3MJ16 856 aa12.14□□□□□ -0.47
LINC00538-201ENST00000626109 ALKBH5Q6P6C2 394 aaKnown RBP12.14□□□□□ -0.47
LINC00538-201ENST00000626109 ZPBP2Q6X784 338 aa12.14□□□□□ -0.47
LINC00538-201ENST00000626109 VSIG1Q86XK7 387 aa12.14□□□□□ -0.47
LINC00538-201ENST00000626109 TRIM43Q96BQ3 446 aaPredicted RBP12.14□□□□□ -0.47
LINC00538-201ENST00000626109 SCLYQ96I15 445 aa12.14□□□□□ -0.47
LINC00538-201ENST00000626109 MS4A14Q96JA4 679 aa12.14□□□□□ -0.47
LINC00538-201ENST00000626109 STRIP2Q9ULQ0 834 aa12.14□□□□□ -0.47
LINC00538-201ENST00000626109 TANC1Q9C0D5 1861 aa12.14□□□□□ -0.47
LINC00538-201ENST00000626109 ZMYM2Q9UBW7 1377 aa12.14□□□□□ -0.47
LINC00538-201ENST00000626109 C17orf113A0A1B0GUU1 675 aa12.13□□□□□ -0.47
LINC00538-201ENST00000626109 MASP2O00187 686 aa12.13□□□□□ -0.47
LINC00538-201ENST00000626109 B4GALT5O43286 388 aa12.13□□□□□ -0.47
LINC00538-201ENST00000626109 BRINP1O60477 761 aa12.13□□□□□ -0.47
LINC00538-201ENST00000626109 PIGRP01833 764 aa12.13□□□□□ -0.47
LINC00538-201ENST00000626109 PF4V1P10720 104 aa12.13□□□□□ -0.47
LINC00538-201ENST00000626109 RFC2P35250 354 aa12.13□□□□□ -0.47
LINC00538-201ENST00000626109 PTK2Q05397 1052 aa12.13□□□□□ -0.47
LINC00538-201ENST00000626109 CUL1Q13616 776 aa12.13□□□□□ -0.47
LINC00538-201ENST00000626109 MBTPS1Q14703 1052 aa12.13□□□□□ -0.47
LINC00538-201ENST00000626109 PPA1Q15181 289 aa12.13□□□□□ -0.47
LINC00538-201ENST00000626109 NFIL3Q16649 462 aa12.13□□□□□ -0.47
LINC00538-201ENST00000626109 DCAF17Q5H9S7 520 aaPredicted RBP12.13□□□□□ -0.47
LINC00538-201ENST00000626109 ATF7IP2Q5U623 682 aa12.13□□□□□ -0.47
LINC00538-201ENST00000626109 TCERG1LQ5VWI1 586 aa12.13□□□□□ -0.47
LINC00538-201ENST00000626109 CCDC116Q8IYX3 515 aa12.13□□□□□ -0.47
LINC00538-201ENST00000626109 ACTRT1Q8TDG2 376 aa12.13□□□□□ -0.47
LINC00538-201ENST00000626109 IFT81Q8WYA0 676 aa12.13□□□□□ -0.47
LINC00538-201ENST00000626109 KRT12Q99456 494 aa12.13□□□□□ -0.47
LINC00538-201ENST00000626109 AGO3Q9H9G7 860 aaKnown RBP12.13□□□□□ -0.47
LINC00538-201ENST00000626109 ERVK-5Q9HDB9 667 aa12.13□□□□□ -0.47
LINC00538-201ENST00000626109 NAGPAQ9UK23 515 aa12.13□□□□□ -0.47
LINC00538-201ENST00000626109 PADI3Q9ULW8 664 aa12.13□□□□□ -0.47
LINC00538-201ENST00000626109 ST3GAL5Q9UNP4 418 aa12.13□□□□□ -0.47
LINC00538-201ENST00000626109 PIN4Q9Y237 131 aaKnown RBP12.13□□□□□ -0.47
LINC00538-201ENST00000626109 SLC30A1Q9Y6M5 507 aa12.13□□□□□ -0.47
LINC00538-201ENST00000626109 BRCA2P51587 3418 aa12.13□□□□□ -0.47
LINC00538-201ENST00000626109 CCDC188H7C350 402 aa12.13□□□□□ -0.47
LINC00538-201ENST00000626109 KCNK3O14649 394 aa12.13□□□□□ -0.47
LINC00538-201ENST00000626109 FOXD2O60548 495 aaPredicted RBP12.13□□□□□ -0.47
LINC00538-201ENST00000626109 HSPA4LO95757 839 aa12.13□□□□□ -0.47
LINC00538-201ENST00000626109 EDN1P05305 212 aa12.13□□□□□ -0.47
LINC00538-201ENST00000626109 H2AFZP0C0S5 128 aa12.13□□□□□ -0.47
LINC00538-201ENST00000626109 HSD3B1P14060 373 aa12.13□□□□□ -0.47
LINC00538-201ENST00000626109 ARF4P18085 180 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms