RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 TMEM92Q6UXU6 159 aa11.83□□□□□ -0.52
TARDBP-221ENST00000619555 RASSF3Q86WH2 238 aa11.83□□□□□ -0.52
TARDBP-221ENST00000619555 DDX42Q86XP3 938 aaKnown RBP eCLIP11.83□□□□□ -0.52
TARDBP-221ENST00000619555 SLC9A9Q8IVB4 645 aa11.83□□□□□ -0.52
TARDBP-221ENST00000619555 ALLCQ8N6M5 410 aa11.83□□□□□ -0.52
TARDBP-221ENST00000619555 PDZD8Q8NEN9 1154 aa11.83□□□□□ -0.52
TARDBP-221ENST00000619555 ZMIZ2Q8NF64 920 aa11.83□□□□□ -0.52
TARDBP-221ENST00000619555 OVCA2Q8WZ82 227 aa11.83□□□□□ -0.52
TARDBP-221ENST00000619555 TNIP3Q96KP6 325 aa11.83□□□□□ -0.52
TARDBP-221ENST00000619555 SMOQ99835 787 aa11.83□□□□□ -0.52
TARDBP-221ENST00000619555 DMAP1Q9NPF5 467 aaPredicted RBP11.83□□□□□ -0.52
TARDBP-221ENST00000619555 ZDHHC4Q9NPG8 344 aa11.83□□□□□ -0.52
TARDBP-221ENST00000619555 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.83□□□□□ -0.521e-9■■■■□ 21.2
TARDBP-221ENST00000619555 HMGXB4Q9UGU5 601 aa11.83□□□□□ -0.52
TARDBP-221ENST00000619555 USP25Q9UHP3 1055 aa11.83□□□□□ -0.52
TARDBP-221ENST00000619555 USP24Q9UPU5 2620 aa11.82□□□□□ -0.52
TARDBP-221ENST00000619555 ASCC3Q8N3C0 2202 aaKnown RBP11.82□□□□□ -0.52
TARDBP-221ENST00000619555 E2F8A0AVK6 867 aa11.82□□□□□ -0.52
TARDBP-221ENST00000619555 BCLAF3A2AJT9 711 aaKnown RBP11.82□□□□□ -0.52
TARDBP-221ENST00000619555 SGK1O00141 431 aa11.82□□□□□ -0.52
TARDBP-221ENST00000619555 PDXKO00764 312 aa11.82□□□□□ -0.52
TARDBP-221ENST00000619555 KLF8O95600 359 aaPredicted RBP11.82□□□□□ -0.52
TARDBP-221ENST00000619555 CAVIN2O95810 425 aa11.82□□□□□ -0.52
TARDBP-221ENST00000619555 ADH1CP00326 375 aa11.82□□□□□ -0.52
TARDBP-221ENST00000619555 APODP05090 189 aa11.82□□□□□ -0.52
TARDBP-221ENST00000619555 ZDHHC11BP0C7U3 371 aa11.82□□□□□ -0.52
TARDBP-221ENST00000619555 ADH5P11766 374 aa11.82□□□□□ -0.52
TARDBP-221ENST00000619555 BCKDHBP21953 392 aa11.82□□□□□ -0.52
TARDBP-221ENST00000619555 TIE1P35590 1138 aa11.82□□□□□ -0.52
TARDBP-221ENST00000619555 NDST1P52848 882 aa11.82□□□□□ -0.52
TARDBP-221ENST00000619555 KDSRQ06136 332 aa11.82□□□□□ -0.52
TARDBP-221ENST00000619555 DPYDQ12882 1025 aa11.82□□□□□ -0.52
TARDBP-221ENST00000619555 SGSM1Q2NKQ1 1148 aa11.82□□□□□ -0.52
TARDBP-221ENST00000619555 ZACNQ401N2 412 aa11.82□□□□□ -0.52
TARDBP-221ENST00000619555 C1orf220Q5T0J3 134 aa11.82□□□□□ -0.52
TARDBP-221ENST00000619555 N4BP2L1Q5TBK1 243 aaPredicted RBP11.82□□□□□ -0.52
TARDBP-221ENST00000619555 SNX30Q5VWJ9 437 aa11.82□□□□□ -0.52
TARDBP-221ENST00000619555 CEP135Q66GS9 1140 aa11.82□□□□□ -0.52
TARDBP-221ENST00000619555 SV2AQ7L0J3 742 aa11.82□□□□□ -0.52
TARDBP-221ENST00000619555 BBS7Q8IWZ6 715 aa11.82□□□□□ -0.52
TARDBP-221ENST00000619555 NAT16Q8N8M0 369 aa11.82□□□□□ -0.52
TARDBP-221ENST00000619555 C12orf29Q8N999 325 aa11.82□□□□□ -0.52
TARDBP-221ENST00000619555 IL17RCQ8NAC3 791 aa11.82□□□□□ -0.52
TARDBP-221ENST00000619555 TXNDC5Q8NBS9 432 aaKnown RBP11.82□□□□□ -0.52
TARDBP-221ENST00000619555 MDGA1Q8NFP4 955 aa11.82□□□□□ -0.52
TARDBP-221ENST00000619555 SLC2A14Q8TDB8 520 aa11.82□□□□□ -0.52
TARDBP-221ENST00000619555 TMEM174Q8WUU8 243 aa11.82□□□□□ -0.52
TARDBP-221ENST00000619555 DDX1Q92499 740 aaKnown RBP11.82□□□□□ -0.52
TARDBP-221ENST00000619555 SMARCD1Q96GM5 515 aa11.82□□□□□ -0.52
TARDBP-221ENST00000619555 CNOT6LQ96LI5 555 aaKnown RBP11.82□□□□□ -0.52
TARDBP-221ENST00000619555 ARHGEF4Q9NR80 690 aa11.82□□□□□ -0.52
TARDBP-221ENST00000619555 KRT82Q9NSB4 513 aa11.82□□□□□ -0.52
TARDBP-221ENST00000619555 TBC1D14Q9P2M4 693 aa11.82□□□□□ -0.52
TARDBP-221ENST00000619555 CACNA1EQ15878 2313 aa11.81□□□□□ -0.52
TARDBP-221ENST00000619555 A0A0A0MRY4 1105 aa11.81□□□□□ -0.52
TARDBP-221ENST00000619555 FAM92AA1XBS5 289 aa11.81□□□□□ -0.52
TARDBP-221ENST00000619555 GOLGA6L4A6NEF3 574 aa11.81□□□□□ -0.52
TARDBP-221ENST00000619555 TBX18O95935 607 aa11.81□□□□□ -0.52
TARDBP-221ENST00000619555 ASS1P00966 412 aaKnown RBP11.81□□□□□ -0.52
TARDBP-221ENST00000619555 HLA-DRAP01903 254 aa11.81□□□□□ -0.52
TARDBP-221ENST00000619555 RPN1P04843 607 aaKnown RBP11.81□□□□□ -0.52
TARDBP-221ENST00000619555 IRF1P10914 325 aa11.81□□□□□ -0.52
TARDBP-221ENST00000619555 P4HA1P13674 534 aa11.81□□□□□ -0.52
TARDBP-221ENST00000619555 GRIA2P42262 883 aa11.81□□□□□ -0.52
TARDBP-221ENST00000619555 KIR2DL1P43626 348 aaPredicted RBP11.81□□□□□ -0.52
TARDBP-221ENST00000619555 ASPAP45381 313 aa11.81□□□□□ -0.52
TARDBP-221ENST00000619555 MAP3K7CLP57077 242 aa11.81□□□□□ -0.52
TARDBP-221ENST00000619555 GAD2Q05329 585 aa11.81□□□□□ -0.52
TARDBP-221ENST00000619555 PNOCQ13519 176 aa11.81□□□□□ -0.52
TARDBP-221ENST00000619555 PMS2CLQ68D20 193 aa11.81□□□□□ -0.52
TARDBP-221ENST00000619555 RNF43Q68DV7 783 aa11.81□□□□□ -0.52
TARDBP-221ENST00000619555 CLEC17AQ6ZS10 378 aa11.81□□□□□ -0.52
TARDBP-221ENST00000619555 TMEM25Q86YD3 366 aa11.81□□□□□ -0.52
TARDBP-221ENST00000619555 CRYBG2Q8N1P7 616 aa11.81□□□□□ -0.52
TARDBP-221ENST00000619555 PHTF2Q8N3S3 785 aa11.81□□□□□ -0.52
TARDBP-221ENST00000619555 TMC2Q8TDI7 906 aa11.81□□□□□ -0.52
TARDBP-221ENST00000619555 RLN3Q8WXF3 142 aa11.81□□□□□ -0.52
TARDBP-221ENST00000619555 ERCC4Q92889 916 aaPredicted RBP11.81□□□□□ -0.52
TARDBP-221ENST00000619555 TWNKQ96RR1 684 aa11.81□□□□□ -0.52
TARDBP-221ENST00000619555 FAM49BQ9NUQ9 324 aa11.81□□□□□ -0.52
TARDBP-221ENST00000619555 COMMD8Q9NX08 183 aa11.81□□□□□ -0.52
TARDBP-221ENST00000619555 SH3BP1Q9Y3L3 701 aa11.81□□□□□ -0.52
TARDBP-221ENST00000619555 C4orf47A7E2U8 309 aa11.8□□□□□ -0.52
TARDBP-221ENST00000619555 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.8□□□□□ -0.52
TARDBP-221ENST00000619555 TRIM24O15164 1050 aa11.8□□□□□ -0.52
TARDBP-221ENST00000619555 TLR5O60602 858 aa11.8□□□□□ -0.52
TARDBP-221ENST00000619555 ADAM23O75077 832 aa11.8□□□□□ -0.52
TARDBP-221ENST00000619555 TULP3O75386 442 aa11.8□□□□□ -0.52
TARDBP-221ENST00000619555 KRT37O76014 449 aa11.8□□□□□ -0.52
TARDBP-221ENST00000619555 ALDH1A2O94788 518 aa11.8□□□□□ -0.52
TARDBP-221ENST00000619555 ADORA2BP29275 332 aa11.8□□□□□ -0.52
TARDBP-221ENST00000619555 EIF2DP41214 584 aaKnown RBP11.8□□□□□ -0.52
TARDBP-221ENST00000619555 TNFRSF4P43489 277 aa11.8□□□□□ -0.52
TARDBP-221ENST00000619555 TUBP50607 506 aa11.8□□□□□ -0.52
TARDBP-221ENST00000619555 GPRIN1Q7Z2K8 1008 aa11.8□□□□□ -0.52
TARDBP-221ENST00000619555 UNC93AQ86WB7 457 aa11.8□□□□□ -0.52
TARDBP-221ENST00000619555 ETFBKMTQ8IXQ9 262 aa11.8□□□□□ -0.52
TARDBP-221ENST00000619555 FRMD1Q8N878 549 aa11.8□□□□□ -0.52
TARDBP-221ENST00000619555 OLIG1Q8TAK6 271 aa11.8□□□□□ -0.52
TARDBP-221ENST00000619555 TAF4BQ92750 862 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms