RNA–Protein interactions for RNA: ENST00000613524.4

SYCP1-209, Transcript of synaptonemal complex protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYCP1, Length 3,034 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-209ENST00000613524 C4orf46Q504U0 113 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 ATAT1Q5SQI0 421 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 SYCE2Q6PIF2 218 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 DCLRE1AQ6PJP8 1040 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 TTC30AQ86WT1 665 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 METTL23Q86XA0 190 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 ADGRF2Q8IZF7 708 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 LNX1Q8TBB1 728 aaPredicted RBP5.26□□□□□ -1.57
SYCP1-209ENST00000613524 CCDC51Q96ER9 411 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 FBXL18Q96ME1 805 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 NFKBIZQ9BYH8 718 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 SNX25Q9H3E2 840 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 LIN7BQ9HAP6 207 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 NGRNQ9NPE2 291 aaKnown RBP5.26□□□□□ -1.57
SYCP1-209ENST00000613524 OLFML3Q9NRN5 406 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 TAB2Q9NYJ8 693 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 COX16Q9P0S2 106 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.26□□□□□ -1.57
SYCP1-209ENST00000613524 L1RE1Q9UN81 338 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 MRPS23Q9Y3D9 190 aaKnown RBP5.26□□□□□ -1.57
SYCP1-209ENST00000613524 RWDD3Q9Y3V2 267 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 MAP4K5Q9Y4K4 846 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 V9GYY5 206 aaPredicted RBP5.26□□□□□ -1.57
SYCP1-209ENST00000613524 TPRP12270 2363 aaKnown RBP5.26□□□□□ -1.57
SYCP1-209ENST00000613524 BECN2A8MW95 431 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 PDGFBP01127 241 aaPredicted RBP5.26□□□□□ -1.57
SYCP1-209ENST00000613524 HMBSP08397 361 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 IRF1P10914 325 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 VIPR2P41587 438 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 VAMP7P51809 220 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 PPP3CAQ08209 521 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 RAPGEF1Q13905 1077 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 ELF2Q15723 593 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 C2CD6Q53TS8 623 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 ZNF280DQ6N043 979 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 PKN3Q6P5Z2 889 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 CCDC149Q6ZUS6 474 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 DDX53Q86TM3 631 aaKnown RBP5.26□□□□□ -1.57
SYCP1-209ENST00000613524 LRRTM3Q86VH5 581 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 BRSK2Q8IWQ3 736 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 TRIM42Q8IWZ5 723 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 APPL2Q8NEU8 664 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 NDRG1Q92597 394 aaKnown RBP5.26□□□□□ -1.57
SYCP1-209ENST00000613524 PPP1R13BQ96KQ4 1090 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 TIPINQ9BVW5 301 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 XPO4Q9C0E2 1151 aaKnown RBP5.26□□□□□ -1.57
SYCP1-209ENST00000613524 NACA2Q9H009 215 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 ATXN3LQ9H3M9 355 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 CUEDC2Q9H467 287 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 EPHX3Q9H6B9 360 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 SAMSN1Q9NSI8 373 aaKnown RBP5.26□□□□□ -1.57
SYCP1-209ENST00000613524 SEPT11Q9NVA2 429 aaKnown RBP5.26□□□□□ -1.57
SYCP1-209ENST00000613524 TMLHEQ9NVH6 421 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 INTS13Q9NVM9 706 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 DZANK1Q9NVP4 752 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 IMPACTQ9P2X3 320 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 SEL1LQ9UBV2 794 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 CHORDC1Q9UHD1 332 aaPredicted RBP5.26□□□□□ -1.57
SYCP1-209ENST00000613524 IP6K2Q9UHH9 426 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 KLF15Q9UIH9 416 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 SIX4Q9UIU6 781 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 FBXL21Q9UKT6 434 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 CA14Q9ULX7 337 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 DOCK8Q8NF50 2099 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 ASPMQ8IZT6 3477 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 A0A1W2PQH9 124 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 NRG2O14511 850 aaPredicted RBP5.26□□□□□ -1.57
SYCP1-209ENST00000613524 FANCGO15287 622 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 XPOTO43592 962 aaKnown RBP5.26□□□□□ -1.57
SYCP1-209ENST00000613524 HLA-DRAP01903 254 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 ODC1P11926 461 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 H2AFXP16104 143 aaPredicted RBP5.26□□□□□ -1.57
SYCP1-209ENST00000613524 PROZP22891 400 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 CCNFP41002 786 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 GSDMDP57764 484 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 MYO1EQ12965 1108 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 PAK1Q13153 545 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 SF1Q15637 639 aaKnown RBP5.26□□□□□ -1.57
SYCP1-209ENST00000613524 CBWD6Q4V339 395 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 CBWD3Q5JTY5 395 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 CBWD5Q5RIA9 395 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 HGSNATQ68CP4 663 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 PDE12Q6L8Q7 609 aaKnown RBP5.26□□□□□ -1.57
SYCP1-209ENST00000613524 LIAT1Q6ZQX7 453 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 SV2AQ7L0J3 742 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 OSTM1Q86WC4 334 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 PASD1Q8IV76 773 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 PABPC5Q96DU9 382 aaKnown RBP5.26□□□□□ -1.57
SYCP1-209ENST00000613524 CDK15Q96Q40 435 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 CYP2S1Q96SQ9 504 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 KCNK16Q96T55 309 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 IMPG2Q9BZV3 1241 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 BRD7Q9NPI1 651 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 AASDHPPTQ9NRN7 309 aa5.26□□□□□ -1.57
SYCP1-209ENST00000613524 BCCIPQ9P287 314 aaKnown RBP eCLIP5.26□□□□□ -1.57
SYCP1-209ENST00000613524 ARMCX3Q9UH62 379 aaPredicted RBP5.26□□□□□ -1.57
SYCP1-209ENST00000613524 PVALEFA0A1B0GWK0 134 aa5.25□□□□□ -1.57
SYCP1-209ENST00000613524 C2CD4DB7Z1M9 353 aa5.25□□□□□ -1.57
SYCP1-209ENST00000613524 NARSO43776 548 aaKnown RBP5.25□□□□□ -1.57
SYCP1-209ENST00000613524 SLU7O95391 586 aaKnown RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms