RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 ANKRD35Q8N283 1001 aa5.77□□□□□ -1.49
LINC00397-202ENST00000606785 PDILTQ8N807 584 aa5.77□□□□□ -1.49
LINC00397-202ENST00000606785 USP38Q8NB14 1042 aa5.77□□□□□ -1.49
LINC00397-202ENST00000606785 RFFLQ8WZ73 363 aa5.77□□□□□ -1.49
LINC00397-202ENST00000606785 CENPIQ92674 756 aaPredicted RBP5.77□□□□□ -1.49
LINC00397-202ENST00000606785 ZBTB45Q96K62 511 aaPredicted RBP5.77□□□□□ -1.49
LINC00397-202ENST00000606785 GNRHR2Q96P88 292 aa5.77□□□□□ -1.49
LINC00397-202ENST00000606785 ZSWIM1Q9BR11 485 aa5.77□□□□□ -1.49
LINC00397-202ENST00000606785 AGXT2Q9BYV1 514 aa5.77□□□□□ -1.49
LINC00397-202ENST00000606785 OLA1Q9NTK5 396 aaKnown RBP5.77□□□□□ -1.49
LINC00397-202ENST00000606785 SLC45A1Q9Y2W3 748 aa5.77□□□□□ -1.49
LINC00397-202ENST00000606785 AFG3L2Q9Y4W6 797 aa5.77□□□□□ -1.49
LINC00397-202ENST00000606785 COL15A1P39059 1388 aa5.77□□□□□ -1.49
LINC00397-202ENST00000606785 PRAMEF33A0A0G2JMD5 474 aa5.76□□□□□ -1.49
LINC00397-202ENST00000606785 A0A1W2PS29 197 aa5.76□□□□□ -1.49
LINC00397-202ENST00000606785 AGPSO00116 658 aa5.76□□□□□ -1.49
LINC00397-202ENST00000606785 LAMTOR5O43504 91 aa5.76□□□□□ -1.49
LINC00397-202ENST00000606785 PRAMEF10O60809 474 aa5.76□□□□□ -1.49
LINC00397-202ENST00000606785 ERN1O75460 977 aaKnown RBP5.76□□□□□ -1.49
LINC00397-202ENST00000606785 LMNAP02545 664 aaKnown RBP5.76□□□□□ -1.49
LINC00397-202ENST00000606785 EPHA3P29320 983 aa5.76□□□□□ -1.49
LINC00397-202ENST00000606785 CD6P30203 668 aa5.76□□□□□ -1.49
LINC00397-202ENST00000606785 PDE6CP51160 858 aa5.76□□□□□ -1.49
LINC00397-202ENST00000606785 RABGGTBP53611 331 aa5.76□□□□□ -1.49
LINC00397-202ENST00000606785 OCA2Q04671 838 aa5.76□□□□□ -1.49
LINC00397-202ENST00000606785 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.76□□□□□ -1.49
LINC00397-202ENST00000606785 PRKG2Q13237 762 aa5.76□□□□□ -1.49
LINC00397-202ENST00000606785 DYRK1AQ13627 763 aa5.76□□□□□ -1.49
LINC00397-202ENST00000606785 HLXQ14774 488 aaPredicted RBP5.76□□□□□ -1.49
LINC00397-202ENST00000606785 GALNTL6Q49A17 601 aa5.76□□□□□ -1.49
LINC00397-202ENST00000606785 PREPLQ4J6C6 727 aaPredicted RBP5.76□□□□□ -1.49
LINC00397-202ENST00000606785 CCDC30Q5VVM6 783 aa5.76□□□□□ -1.49
LINC00397-202ENST00000606785 TCERG1LQ5VWI1 586 aa5.76□□□□□ -1.49
LINC00397-202ENST00000606785 ICE2Q659A1 982 aa5.76□□□□□ -1.49
LINC00397-202ENST00000606785 HTR3DQ70Z44 454 aa5.76□□□□□ -1.49
LINC00397-202ENST00000606785 SYT13Q7L8C5 426 aa5.76□□□□□ -1.49
LINC00397-202ENST00000606785 TRABD2AQ86V40 505 aa5.76□□□□□ -1.49
LINC00397-202ENST00000606785 GSPT2Q8IYD1 628 aaKnown RBP5.76□□□□□ -1.49
LINC00397-202ENST00000606785 SUN3Q8TAQ9 357 aa5.76□□□□□ -1.49
LINC00397-202ENST00000606785 UCMAQ8WVF2 138 aa5.76□□□□□ -1.49
LINC00397-202ENST00000606785 SNRNP27Q8WVK2 155 aaKnown RBP5.76□□□□□ -1.49
LINC00397-202ENST00000606785 ST8SIA4Q92187 359 aa5.76□□□□□ -1.49
LINC00397-202ENST00000606785 PKNOX2Q96KN3 472 aa5.76□□□□□ -1.49
LINC00397-202ENST00000606785 REEP2Q9BRK0 252 aa5.76□□□□□ -1.49
LINC00397-202ENST00000606785 PAIP1Q9H074 479 aaKnown RBP5.76□□□□□ -1.49
LINC00397-202ENST00000606785 ABHD16BQ9H3Z7 469 aa5.76□□□□□ -1.49
LINC00397-202ENST00000606785 RNF181Q9P0P0 153 aa5.76□□□□□ -1.49
LINC00397-202ENST00000606785 AASSQ9UDR5 926 aa5.76□□□□□ -1.49
LINC00397-202ENST00000606785 KCND3Q9UK17 655 aa5.76□□□□□ -1.49
LINC00397-202ENST00000606785 ARHGAP26Q9UNA1 814 aa5.76□□□□□ -1.49
LINC00397-202ENST00000606785 SSX2IPQ9Y2D8 614 aa5.76□□□□□ -1.49
LINC00397-202ENST00000606785 DNAJC16Q9Y2G8 782 aa5.76□□□□□ -1.49
LINC00397-202ENST00000606785 A0A087X0M5 115 aa5.75□□□□□ -1.49
LINC00397-202ENST00000606785 A0A1B0GX30 115 aa5.75□□□□□ -1.49
LINC00397-202ENST00000606785 A6NCN8 305 aa5.75□□□□□ -1.49
LINC00397-202ENST00000606785 KIF28PB7ZC32 967 aa5.75□□□□□ -1.49
LINC00397-202ENST00000606785 F5H697 171 aa5.75□□□□□ -1.49
LINC00397-202ENST00000606785 K7ENM7 598 aa5.75□□□□□ -1.49
LINC00397-202ENST00000606785 TRIAP1O43715 76 aa5.75□□□□□ -1.49
LINC00397-202ENST00000606785 TSPAN3O60637 253 aa5.75□□□□□ -1.49
LINC00397-202ENST00000606785 CBFA2T3O75081 653 aa5.75□□□□□ -1.49
LINC00397-202ENST00000606785 LARGE1O95461 756 aa5.75□□□□□ -1.49
LINC00397-202ENST00000606785 CER1O95813 267 aa5.75□□□□□ -1.49
LINC00397-202ENST00000606785 HNRNPA1P09651 372 aaKnown RBP eCLIP5.75□□□□□ -1.49
LINC00397-202ENST00000606785 ADORA2AP29274 412 aa5.75□□□□□ -1.49
LINC00397-202ENST00000606785 APOBEC3AP31941 199 aaPredicted RBP5.75□□□□□ -1.49
LINC00397-202ENST00000606785 HTR7P34969 479 aa5.75□□□□□ -1.49
LINC00397-202ENST00000606785 MAGEA10P43363 369 aaPredicted RBP5.75□□□□□ -1.49
LINC00397-202ENST00000606785 NPTX2P47972 431 aa5.75□□□□□ -1.49
LINC00397-202ENST00000606785 RBM5P52756 815 aaKnown RBP eCLIP5.75□□□□□ -1.49
LINC00397-202ENST00000606785 CASP6P55212 293 aa5.75□□□□□ -1.49
LINC00397-202ENST00000606785 RNASE9P60153 205 aaKnown RBP5.75□□□□□ -1.49
LINC00397-202ENST00000606785 DCAF7P61962 342 aa5.75□□□□□ -1.49
LINC00397-202ENST00000606785 SF3A3Q12874 501 aaKnown RBP eCLIP5.75□□□□□ -1.49
LINC00397-202ENST00000606785 CLCA4Q14CN2 919 aa5.75□□□□□ -1.49
LINC00397-202ENST00000606785 TOMM20Q15388 145 aa5.75□□□□□ -1.49
LINC00397-202ENST00000606785 CTXN3Q4LDR2 81 aa5.75□□□□□ -1.49
LINC00397-202ENST00000606785 RBM20Q5T481 1227 aaKnown RBP5.75□□□□□ -1.49
LINC00397-202ENST00000606785 SPATA1Q5VX52 437 aa5.75□□□□□ -1.49
LINC00397-202ENST00000606785 ATG16L1Q676U5 607 aa5.75□□□□□ -1.49
LINC00397-202ENST00000606785 DGAT2L7PQ6IED9 249 aa5.75□□□□□ -1.49
LINC00397-202ENST00000606785 MSANTD2Q6P1R3 559 aa5.75□□□□□ -1.49
LINC00397-202ENST00000606785 MICALCLQ6ZW33 695 aa5.75□□□□□ -1.49
LINC00397-202ENST00000606785 NEK10Q6ZWH5 1172 aa5.75□□□□□ -1.49
LINC00397-202ENST00000606785 MAPKAPK5Q8IW41 473 aa5.75□□□□□ -1.49
LINC00397-202ENST00000606785 ADGRG5Q8IZF4 528 aa5.75□□□□□ -1.49
LINC00397-202ENST00000606785 FUKQ8N0W3 1084 aa5.75□□□□□ -1.49
LINC00397-202ENST00000606785 FSTL5Q8N475 847 aaPredicted RBP5.75□□□□□ -1.49
LINC00397-202ENST00000606785 FAM109AQ8N4B1 249 aa5.75□□□□□ -1.49
LINC00397-202ENST00000606785 HMGB4Q8WW32 186 aa5.75□□□□□ -1.49
LINC00397-202ENST00000606785 ZUFSPQ96AP4 578 aa5.75□□□□□ -1.49
LINC00397-202ENST00000606785 C7orf26Q96N11 449 aa5.75□□□□□ -1.49
LINC00397-202ENST00000606785 DCLRE1CQ96SD1 692 aaKnown RBP5.75□□□□□ -1.49
LINC00397-202ENST00000606785 OSBPL9Q96SU4 736 aa5.75□□□□□ -1.49
LINC00397-202ENST00000606785 PLEKHA5Q9HAU0 1116 aa5.75□□□□□ -1.49
LINC00397-202ENST00000606785 LIN7CQ9NUP9 197 aaKnown RBP5.75□□□□□ -1.49
LINC00397-202ENST00000606785 CLIC5Q9NZA1 410 aa5.75□□□□□ -1.49
LINC00397-202ENST00000606785 KCNE5Q9UJ90 142 aa5.75□□□□□ -1.49
LINC00397-202ENST00000606785 SERTAD3Q9UJW9 196 aa5.75□□□□□ -1.49
LINC00397-202ENST00000606785 TBX20Q9UMR3 447 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms