RNA–Protein interactions for RNA: ENST00000588216.5

TNPO2-210, Transcript of transportin 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNPO2, Length 3,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO2-210ENST00000588216 DEFB115Q30KQ5 88 aa12.66□□□□□ -0.38
TNPO2-210ENST00000588216 CCDC137Q6PK04 289 aaKnown RBP12.66□□□□□ -0.38
TNPO2-210ENST00000588216 BEST2Q8NFU1 509 aa12.66□□□□□ -0.38
TNPO2-210ENST00000588216 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.66□□□□□ -0.38
TNPO2-210ENST00000588216 CD99L2Q8TCZ2 262 aa12.66□□□□□ -0.38
TNPO2-210ENST00000588216 INPP5DQ92835 1189 aa12.66□□□□□ -0.38
TNPO2-210ENST00000588216 FAM192AQ9GZU8 254 aa12.66□□□□□ -0.38
TNPO2-210ENST00000588216 GTF2IRD1Q9UHL9 959 aa12.66□□□□□ -0.38
TNPO2-210ENST00000588216 TSPAN16Q9UKR8 245 aa12.66□□□□□ -0.38
TNPO2-210ENST00000588216 BARX2Q9UMQ3 279 aaPredicted RBP12.66□□□□□ -0.38
TNPO2-210ENST00000588216 ST3GAL5Q9UNP4 418 aa12.66□□□□□ -0.38
TNPO2-210ENST00000588216 LRCH1Q9Y2L9 728 aa12.66□□□□□ -0.38
TNPO2-210ENST00000588216 SCINQ9Y6U3 715 aa12.66□□□□□ -0.38
TNPO2-210ENST00000588216 IGHA2P01877 340 aa12.66□□□□□ -0.38
TNPO2-210ENST00000588216 ERBB2P04626 1255 aa12.66□□□□□ -0.38
TNPO2-210ENST00000588216 RALAP11233 206 aa12.66□□□□□ -0.38
TNPO2-210ENST00000588216 CYP3A5P20815 502 aa12.66□□□□□ -0.38
TNPO2-210ENST00000588216 LMO2P25791 158 aa12.66□□□□□ -0.38
TNPO2-210ENST00000588216 ATICP31939 592 aa12.66□□□□□ -0.38
TNPO2-210ENST00000588216 CDC42EP1Q00587 391 aa12.66□□□□□ -0.38
TNPO2-210ENST00000588216 FAM182AQ5T1J6 154 aa12.66□□□□□ -0.38
TNPO2-210ENST00000588216 PPP1R26Q5T8A7 1209 aaPredicted RBP12.66□□□□□ -0.38
TNPO2-210ENST00000588216 EXOC3L1Q86VI1 746 aa12.66□□□□□ -0.38
TNPO2-210ENST00000588216 ANKLE1Q8NAG6 615 aa12.66□□□□□ -0.38
TNPO2-210ENST00000588216 SMG8Q8ND04 991 aaKnown RBP12.66□□□□□ -0.38
TNPO2-210ENST00000588216 EPS8L3Q8TE67 593 aaKnown RBP12.66□□□□□ -0.38
TNPO2-210ENST00000588216 CKAP2Q8WWK9 683 aa12.66□□□□□ -0.38
TNPO2-210ENST00000588216 PIWIL1Q96J94 861 aaKnown RBP12.66□□□□□ -0.38
TNPO2-210ENST00000588216 NAP1L3Q99457 506 aaPredicted RBP12.66□□□□□ -0.38
TNPO2-210ENST00000588216 ZWILCHQ9H900 591 aa12.66□□□□□ -0.38
TNPO2-210ENST00000588216 CHST7Q9NS84 486 aa12.66□□□□□ -0.38
TNPO2-210ENST00000588216 Q9Y3F1 56 aa12.66□□□□□ -0.38
TNPO2-210ENST00000588216 TMEM191CA6NGB0 347 aa12.65□□□□□ -0.38
TNPO2-210ENST00000588216 M0QZ92 97 aa12.65□□□□□ -0.38
TNPO2-210ENST00000588216 RASGRF2O14827 1237 aa12.65□□□□□ -0.38
TNPO2-210ENST00000588216 LMNAP02545 664 aaKnown RBP12.65□□□□□ -0.38
TNPO2-210ENST00000588216 CALB1P05937 261 aa12.65□□□□□ -0.38
TNPO2-210ENST00000588216 KRT3P12035 628 aa12.65□□□□□ -0.38
TNPO2-210ENST00000588216 ATF7P17544 494 aaPredicted RBP12.65□□□□□ -0.38
TNPO2-210ENST00000588216 GM2AP17900 193 aa12.65□□□□□ -0.38
TNPO2-210ENST00000588216 MGAT5Q09328 741 aa12.65□□□□□ -0.38
TNPO2-210ENST00000588216 KYAT1Q16773 422 aa12.65□□□□□ -0.38
TNPO2-210ENST00000588216 SGO2Q562F6 1265 aa12.65□□□□□ -0.38
TNPO2-210ENST00000588216 FOXB2Q5VYV0 432 aa12.65□□□□□ -0.38
TNPO2-210ENST00000588216 C9orf57Q5W0N0 161 aa12.65□□□□□ -0.38
TNPO2-210ENST00000588216 ZDHHC24Q6UX98 284 aa12.65□□□□□ -0.38
TNPO2-210ENST00000588216 FAM13CQ8NE31 585 aa12.65□□□□□ -0.38
TNPO2-210ENST00000588216 HAUS1Q96CS2 278 aa12.65□□□□□ -0.38
TNPO2-210ENST00000588216 DDX27Q96GQ7 796 aaKnown RBP12.65□□□□□ -0.38
TNPO2-210ENST00000588216 VCPIP1Q96JH7 1222 aa12.65□□□□□ -0.38
TNPO2-210ENST00000588216 ZNF333Q96JL9 665 aa12.65□□□□□ -0.38
TNPO2-210ENST00000588216 PLEKHG4BQ96PX9 1271 aa12.65□□□□□ -0.38
TNPO2-210ENST00000588216 NT5C1AQ9BXI3 368 aa12.65□□□□□ -0.38
TNPO2-210ENST00000588216 ROPN1BQ9BZX4 212 aaPredicted RBP12.65□□□□□ -0.38
TNPO2-210ENST00000588216 UBE2OQ9C0C9 1292 aaKnown RBP12.65□□□□□ -0.38
TNPO2-210ENST00000588216 AGO3Q9H9G7 860 aaKnown RBP12.65□□□□□ -0.38
TNPO2-210ENST00000588216 ROPN1Q9HAT0 212 aaPredicted RBP12.65□□□□□ -0.38
TNPO2-210ENST00000588216 METTL5Q9NRN9 209 aaKnown RBP12.65□□□□□ -0.38
TNPO2-210ENST00000588216 TRMT13Q9NUP7 481 aaKnown RBP12.65□□□□□ -0.38
TNPO2-210ENST00000588216 PCSK1NQ9UHG2 260 aa12.65□□□□□ -0.38
TNPO2-210ENST00000588216 PHF24Q9UPV7 400 aa12.65□□□□□ -0.38
TNPO2-210ENST00000588216 A8MXQ7 604 aa12.65□□□□□ -0.38
TNPO2-210ENST00000588216 MED7O43513 233 aa12.65□□□□□ -0.38
TNPO2-210ENST00000588216 CHRNA1P02708 482 aa12.65□□□□□ -0.38
TNPO2-210ENST00000588216 VPS41P49754 854 aa12.65□□□□□ -0.38
TNPO2-210ENST00000588216 NOGQ13253 232 aa12.65□□□□□ -0.38
TNPO2-210ENST00000588216 DHX34Q14147 1143 aaKnown RBP12.65□□□□□ -0.38
TNPO2-210ENST00000588216 MUM1Q2TAK8 710 aa12.65□□□□□ -0.38
TNPO2-210ENST00000588216 GRAMD1AQ96CP6 724 aa12.65□□□□□ -0.38
TNPO2-210ENST00000588216 PCDHGC3Q9UN70 934 aa12.65□□□□□ -0.38
TNPO2-210ENST00000588216 R3HDM2Q9Y2K5 976 aaKnown RBP12.65□□□□□ -0.38
TNPO2-210ENST00000588216 CTNNA2P26232 953 aa12.65□□□□□ -0.38
TNPO2-210ENST00000588216 PLTPP55058 493 aa12.65□□□□□ -0.38
TNPO2-210ENST00000588216 MRPS6P82932 125 aaKnown RBP12.65□□□□□ -0.38
TNPO2-210ENST00000588216 USP4Q13107 963 aa12.65□□□□□ -0.38
TNPO2-210ENST00000588216 TAF5Q15542 800 aa12.65□□□□□ -0.38
TNPO2-210ENST00000588216 ZBTB6Q15916 424 aa12.65□□□□□ -0.38
TNPO2-210ENST00000588216 SOWAHAQ2M3V2 549 aa12.65□□□□□ -0.38
TNPO2-210ENST00000588216 PABPC1LQ4VXU2 614 aaKnown RBP12.65□□□□□ -0.38
TNPO2-210ENST00000588216 RAB6CQ53S08 254 aa12.65□□□□□ -0.38
TNPO2-210ENST00000588216 PRUNE1Q86TP1 453 aa12.65□□□□□ -0.38
TNPO2-210ENST00000588216 LONP2Q86WA8 852 aa12.65□□□□□ -0.38
TNPO2-210ENST00000588216 PHC3Q8NDX5 983 aa12.65□□□□□ -0.38
TNPO2-210ENST00000588216 RAB6CQ9H0N0 254 aa12.65□□□□□ -0.38
TNPO2-210ENST00000588216 DNAJC17Q9NVM6 304 aaKnown RBP12.65□□□□□ -0.38
TNPO2-210ENST00000588216 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.65□□□□□ -0.38
TNPO2-210ENST00000588216 LAMA3Q16787 3333 aa12.64□□□□□ -0.39
TNPO2-210ENST00000588216 NVLO15381 856 aaKnown RBP12.64□□□□□ -0.39
TNPO2-210ENST00000588216 LSM8O95777 96 aaKnown RBP12.64□□□□□ -0.39
TNPO2-210ENST00000588216 PSMA2P25787 234 aa12.64□□□□□ -0.39
TNPO2-210ENST00000588216 ADORA2BP29275 332 aa12.64□□□□□ -0.39
TNPO2-210ENST00000588216 MLH1P40692 756 aa12.64□□□□□ -0.39
TNPO2-210ENST00000588216 GPD2P43304 727 aa12.64□□□□□ -0.39
TNPO2-210ENST00000588216 LRRC14Q15048 493 aa12.64□□□□□ -0.39
TNPO2-210ENST00000588216 CDO1Q16878 200 aa12.64□□□□□ -0.39
TNPO2-210ENST00000588216 UBAP2Q5T6F2 1119 aaKnown RBP12.64□□□□□ -0.39
TNPO2-210ENST00000588216 SH3PXD2AQ5TCZ1 1133 aa12.64□□□□□ -0.39
TNPO2-210ENST00000588216 ALKAL1Q6UXT8 129 aa12.64□□□□□ -0.39
TNPO2-210ENST00000588216 JAMLQ86YT9 394 aa12.64□□□□□ -0.39
TNPO2-210ENST00000588216 RHOT1Q8IXI2 618 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms