RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 SCFD2Q8WU76 684 aa4.74□□□□□ -1.65
HMGB3P26-201ENST00000560051 KRT35Q92764 455 aa4.74□□□□□ -1.65
HMGB3P26-201ENST00000560051 FAM162AQ96A26 154 aa4.74□□□□□ -1.65
HMGB3P26-201ENST00000560051 AHCYL2Q96HN2 611 aaKnown RBP4.74□□□□□ -1.65
HMGB3P26-201ENST00000560051 AK8Q96MA6 479 aa4.74□□□□□ -1.65
HMGB3P26-201ENST00000560051 NLRP4Q96MN2 994 aa4.74□□□□□ -1.65
HMGB3P26-201ENST00000560051 TTC25Q96NG3 672 aa4.74□□□□□ -1.65
HMGB3P26-201ENST00000560051 FAM111AQ96PZ2 611 aa4.74□□□□□ -1.65
HMGB3P26-201ENST00000560051 TM9SF2Q99805 663 aa4.74□□□□□ -1.65
HMGB3P26-201ENST00000560051 SIKE1Q9BRV8 207 aa4.74□□□□□ -1.65
HMGB3P26-201ENST00000560051 AARSD1Q9BTE6 412 aaKnown RBP4.74□□□□□ -1.65
HMGB3P26-201ENST00000560051 KRT23Q9C075 422 aa4.74□□□□□ -1.65
HMGB3P26-201ENST00000560051 ADNPQ9H2P0 1102 aa4.74□□□□□ -1.65
HMGB3P26-201ENST00000560051 MID1IP1Q9NPA3 183 aa4.74□□□□□ -1.65
HMGB3P26-201ENST00000560051 DCP1AQ9NPI6 582 aaPredicted RBP4.74□□□□□ -1.65
HMGB3P26-201ENST00000560051 SNTG1Q9NSN8 517 aa4.74□□□□□ -1.65
HMGB3P26-201ENST00000560051 MIS18AQ9NYP9 233 aa4.74□□□□□ -1.65
HMGB3P26-201ENST00000560051 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.74□□□□□ -1.65
HMGB3P26-201ENST00000560051 HMG20BQ9P0W2 317 aa4.74□□□□□ -1.65
HMGB3P26-201ENST00000560051 RPS6KA6Q9UK32 745 aa4.74□□□□□ -1.65
HMGB3P26-201ENST00000560051 MAGED2Q9UNF1 606 aaPredicted RBP4.74□□□□□ -1.65
HMGB3P26-201ENST00000560051 CFL2Q9Y281 166 aa4.74□□□□□ -1.65
HMGB3P26-201ENST00000560051 POLR3KQ9Y2Y1 108 aaPredicted RBP4.74□□□□□ -1.65
HMGB3P26-201ENST00000560051 PCDHGA1Q9Y5H4 931 aa4.74□□□□□ -1.65
HMGB3P26-201ENST00000560051 COMMD3-BMI1R4GMX3 469 aa4.74□□□□□ -1.65
HMGB3P26-201ENST00000560051 ROCK2O75116 1388 aaKnown RBP4.74□□□□□ -1.65
HMGB3P26-201ENST00000560051 TTC41PQ6P2S7 1318 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 CCDC171Q6TFL3 1326 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 PITPNM2Q9BZ72 1349 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 PRDM2Q13029 1718 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 KRTAP9-7A8MTY7 169 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 NT5C1B-RDH14C9J2C7 533 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 F8W810 466 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 H3BQV1 296 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 GTPBP1O00178 669 aaKnown RBP4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 HAT1O14929 419 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 KPNA5O15131 536 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 NCK2O43639 380 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 PEX1O43933 1283 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 GUCY1B2O75343 617 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 ATE1O95260 518 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 FKBP9O95302 570 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 IVLP07476 585 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 GALTP07902 379 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 ALOX5P09917 674 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 MYBL1P10243 752 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 CKMT1AP12532 417 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 ANXA8P13928 327 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 VEGFAP15692 232 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 IFNAR1P17181 557 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 NME2P22392 152 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 TNFSF4P23510 183 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 HOXA6P31267 233 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 CETN2P41208 172 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 MAGEA9P43362 315 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 HSPA13P48723 471 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 ARHGDIBP52566 201 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 GBX2P52951 348 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 RARSP54136 660 aaKnown RBP4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 CTSWP56202 376 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 CYP4F2P78329 520 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 IFI35P80217 286 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 S100A12P80511 92 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 CYP4F3Q08477 520 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 CHAF1BQ13112 559 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 MAPK7Q13164 816 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 STARD3Q14849 445 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 EFTUD2Q15029 972 aaKnown RBP eCLIP4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 TAF5Q15542 800 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 KCNA10Q16322 511 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 NKPD1Q17RQ9 610 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 PPM1JQ5JR12 505 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 ATPAF1Q5TC12 328 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 CYP4A22Q5TCH4 519 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 GKAP1Q5VSY0 366 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 ANXA8L1Q5VT79 327 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 SHEQ5VZ18 495 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 HAUS3Q68CZ6 603 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 CEP85Q6P2H3 762 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 MEX3BQ6ZN04 569 aaKnown RBP4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 UNC5AQ6ZN44 842 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 FKBP9P1Q75LS8 142 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 TAF8Q7Z7C8 310 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 TADA2BQ86TJ2 420 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 PDZD3Q86UT5 571 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 FAM124AQ86V42 546 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 AMIGO3Q86WK7 504 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 GATAD2AQ86YP4 633 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 TRIM59Q8IWR1 403 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 CDH26Q8IXH8 852 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 CACNA2D3Q8IZS8 1091 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 ANKRD35Q8N283 1001 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 GALNT15Q8N3T1 639 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 ZNF565Q8N9K5 539 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 FANCBQ8NB91 859 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 OR6S1Q8NH40 331 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 KIF18AQ8NI77 898 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 SPATA20Q8TB22 786 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 SPPL3Q8TCT6 385 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 DIO2Q92813 273 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 131.3 ms