RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 SIX1Q15475 284 aaPredicted RBP11.39□□□□□ -0.59
PABPN1-203ENST00000553960 DPYSL2Q16555 572 aa11.39□□□□□ -0.59
PABPN1-203ENST00000553960 C2CD6Q53TS8 623 aa11.39□□□□□ -0.59
PABPN1-203ENST00000553960 SEL1L2Q5TEA6 688 aa11.39□□□□□ -0.59
PABPN1-203ENST00000553960 CCDC181Q5TID7 509 aa11.39□□□□□ -0.59
PABPN1-203ENST00000553960 PDE12Q6L8Q7 609 aaKnown RBP11.39□□□□□ -0.59
PABPN1-203ENST00000553960 KLHDC10Q6PID8 442 aa11.39□□□□□ -0.59
PABPN1-203ENST00000553960 TMEM173Q86WV6 379 aaPredicted RBP11.39□□□□□ -0.59
PABPN1-203ENST00000553960 HERC6Q8IVU3 1022 aa11.39□□□□□ -0.59
PABPN1-203ENST00000553960 TCEAL8Q8IYN2 117 aa11.39□□□□□ -0.59
PABPN1-203ENST00000553960 NUP93Q8N1F7 819 aa11.39□□□□□ -0.59
PABPN1-203ENST00000553960 SIX6OS1Q8N1H7 587 aa11.39□□□□□ -0.59
PABPN1-203ENST00000553960 FBXO22Q8NEZ5 403 aa11.39□□□□□ -0.59
PABPN1-203ENST00000553960 HNRNPLLQ8WVV9 542 aaKnown RBP11.39□□□□□ -0.59
PABPN1-203ENST00000553960 UBXN4Q92575 508 aa11.39□□□□□ -0.59
PABPN1-203ENST00000553960 BADQ92934 168 aa11.39□□□□□ -0.59
PABPN1-203ENST00000553960 TRMT2BQ96GJ1 504 aaKnown RBP11.39□□□□□ -0.59
PABPN1-203ENST00000553960 GOLPH3Q9H4A6 298 aa11.39□□□□□ -0.59
PABPN1-203ENST00000553960 RETREG1Q9H6L5 497 aa11.39□□□□□ -0.59
PABPN1-203ENST00000553960 PRDM5Q9NQX1 630 aaPredicted RBP11.39□□□□□ -0.59
PABPN1-203ENST00000553960 ABCC13Q9NSE7 274 aa11.39□□□□□ -0.59
PABPN1-203ENST00000553960 USP18Q9UMW8 372 aa11.39□□□□□ -0.59
PABPN1-203ENST00000553960 SOBPA7XYQ1 873 aa11.38□□□□□ -0.59
PABPN1-203ENST00000553960 ZNF185O15231 689 aa11.38□□□□□ -0.59
PABPN1-203ENST00000553960 CEP104O60308 925 aa11.38□□□□□ -0.59
PABPN1-203ENST00000553960 SRGAP2O75044 1071 aa11.38□□□□□ -0.59
PABPN1-203ENST00000553960 LTFP02788 710 aa11.38□□□□□ -0.59
PABPN1-203ENST00000553960 CTSAP10619 480 aa11.38□□□□□ -0.59
PABPN1-203ENST00000553960 PFKLP17858 780 aa11.38□□□□□ -0.59
PABPN1-203ENST00000553960 KCNA4P22459 653 aa11.38□□□□□ -0.59
PABPN1-203ENST00000553960 MIPP30301 263 aa11.38□□□□□ -0.59
PABPN1-203ENST00000553960 CHRNA3P32297 505 aa11.38□□□□□ -0.59
PABPN1-203ENST00000553960 CDKN2BP42772 138 aa11.38□□□□□ -0.59
PABPN1-203ENST00000553960 GLUD2P49448 558 aa11.38□□□□□ -0.59
PABPN1-203ENST00000553960 CACNA2D1P54289 1103 aa11.38□□□□□ -0.59
PABPN1-203ENST00000553960 HDAC4P56524 1084 aa11.38□□□□□ -0.59
PABPN1-203ENST00000553960 KRT17Q04695 432 aa11.38□□□□□ -0.59
PABPN1-203ENST00000553960 CBLBQ13191 982 aa11.38□□□□□ -0.59
PABPN1-203ENST00000553960 DHX34Q14147 1143 aaKnown RBP11.38□□□□□ -0.59
PABPN1-203ENST00000553960 CCNG2Q16589 344 aa11.38□□□□□ -0.59
PABPN1-203ENST00000553960 PAN2Q504Q3 1202 aaKnown RBP11.38□□□□□ -0.59
PABPN1-203ENST00000553960 TFDP3Q5H9I0 405 aa11.38□□□□□ -0.59
PABPN1-203ENST00000553960 LLGL2Q6P1M3 1020 aa11.38□□□□□ -0.59
PABPN1-203ENST00000553960 SYDE1Q6ZW31 735 aaPredicted RBP11.38□□□□□ -0.59
PABPN1-203ENST00000553960 MAP7D3Q8IWC1 876 aa11.38□□□□□ -0.59
PABPN1-203ENST00000553960 FIBCD1Q8N539 461 aa11.38□□□□□ -0.59
PABPN1-203ENST00000553960 TTC13Q8NBP0 860 aa11.38□□□□□ -0.59
PABPN1-203ENST00000553960 HDAC7Q8WUI4 952 aa11.38□□□□□ -0.59
PABPN1-203ENST00000553960 TSC1Q92574 1164 aa11.38□□□□□ -0.59
PABPN1-203ENST00000553960 PIWIL1Q96J94 861 aaKnown RBP11.38□□□□□ -0.59
PABPN1-203ENST00000553960 BTBD6Q96KE9 485 aa11.38□□□□□ -0.59
PABPN1-203ENST00000553960 PKNOX2Q96KN3 472 aa11.38□□□□□ -0.59
PABPN1-203ENST00000553960 CDK5RAP1Q96SZ6 601 aaKnown RBP11.38□□□□□ -0.59
PABPN1-203ENST00000553960 KCNK16Q96T55 309 aa11.38□□□□□ -0.59
PABPN1-203ENST00000553960 YME1L1Q96TA2 773 aa11.38□□□□□ -0.59
PABPN1-203ENST00000553960 LPIN3Q9BQK8 851 aa11.38□□□□□ -0.59
PABPN1-203ENST00000553960 CLSTN3Q9BQT9 956 aa11.38□□□□□ -0.59
PABPN1-203ENST00000553960 ZNF670Q9BS34 389 aa11.38□□□□□ -0.59
PABPN1-203ENST00000553960 MED10Q9BTT4 135 aa11.38□□□□□ -0.59
PABPN1-203ENST00000553960 ZBP1Q9H171 429 aa11.38□□□□□ -0.59
PABPN1-203ENST00000553960 CHORDC1Q9UHD1 332 aaPredicted RBP11.38□□□□□ -0.59
PABPN1-203ENST00000553960 MTUS1Q9ULD2 1270 aa11.38□□□□□ -0.59
PABPN1-203ENST00000553960 PACSIN2Q9UNF0 486 aaPredicted RBP11.38□□□□□ -0.59
PABPN1-203ENST00000553960 SLC4A7Q9Y6M7 1214 aa11.38□□□□□ -0.59
PABPN1-203ENST00000553960 GOLGA6L10A0A0M3HER8 536 aa11.37□□□□□ -0.59
PABPN1-203ENST00000553960 GOLGA8SH3BPF8 625 aa11.37□□□□□ -0.59
PABPN1-203ENST00000553960 FGGP02679 453 aa11.37□□□□□ -0.59
PABPN1-203ENST00000553960 IL1R2P27930 398 aa11.37□□□□□ -0.59
PABPN1-203ENST00000553960 SSTR3P32745 418 aaPredicted RBP11.37□□□□□ -0.59
PABPN1-203ENST00000553960 BMPR1AP36894 532 aa11.37□□□□□ -0.59
PABPN1-203ENST00000553960 MARCKSL1P49006 195 aa11.37□□□□□ -0.59
PABPN1-203ENST00000553960 CXCR3P49682 368 aa11.37□□□□□ -0.59
PABPN1-203ENST00000553960 RGS7P49802 495 aa11.37□□□□□ -0.59
PABPN1-203ENST00000553960 TUBP50607 506 aa11.37□□□□□ -0.59
PABPN1-203ENST00000553960 EPHB4P54760 987 aa11.37□□□□□ -0.59
PABPN1-203ENST00000553960 ROR1Q01973 937 aa11.37□□□□□ -0.59
PABPN1-203ENST00000553960 PSMD5Q16401 504 aa11.37□□□□□ -0.59
PABPN1-203ENST00000553960 SLC39A12Q504Y0 691 aa11.37□□□□□ -0.59
PABPN1-203ENST00000553960 CCDC70Q6NSX1 233 aa11.37□□□□□ -0.59
PABPN1-203ENST00000553960 LILRA6Q6PI73 481 aa11.37□□□□□ -0.59
PABPN1-203ENST00000553960 BBS12Q6ZW61 710 aa11.37□□□□□ -0.59
PABPN1-203ENST00000553960 MAATS1Q7Z4T9 603 aa11.37□□□□□ -0.59
PABPN1-203ENST00000553960 PDZD8Q8NEN9 1154 aa11.37□□□□□ -0.59
PABPN1-203ENST00000553960 HASPINQ8TF76 798 aa11.37□□□□□ -0.59
PABPN1-203ENST00000553960 ANKRD7Q92527 254 aa11.37□□□□□ -0.59
PABPN1-203ENST00000553960 NKD2Q969F2 451 aaPredicted RBP11.37□□□□□ -0.59
PABPN1-203ENST00000553960 SLITRK1Q96PX8 696 aa11.37□□□□□ -0.59
PABPN1-203ENST00000553960 TMEM209Q96SK2 561 aa11.37□□□□□ -0.59
PABPN1-203ENST00000553960 OSBPL8Q9BZF1 889 aa11.37□□□□□ -0.59
PABPN1-203ENST00000553960 ULBP1Q9BZM6 244 aa11.37□□□□□ -0.59
PABPN1-203ENST00000553960 UBE2OQ9C0C9 1292 aaKnown RBP11.37□□□□□ -0.59
PABPN1-203ENST00000553960 SMOC2Q9H3U7 446 aa11.37□□□□□ -0.59
PABPN1-203ENST00000553960 OLA1Q9NTK5 396 aaKnown RBP11.37□□□□□ -0.59
PABPN1-203ENST00000553960 DRG1Q9Y295 367 aaKnown RBP11.37□□□□□ -0.59
PABPN1-203ENST00000553960 ASB3Q9Y575 518 aa11.37□□□□□ -0.59
PABPN1-203ENST00000553960 NR2E3Q9Y5X4 410 aa11.37□□□□□ -0.59
PABPN1-203ENST00000553960 MTCL1Q9Y4B5 1905 aaKnown RBP11.37□□□□□ -0.59
PABPN1-203ENST00000553960 MKI67P46013 3256 aaKnown RBP11.36□□□□□ -0.59
PABPN1-203ENST00000553960 hCG_1818297A0A087WSY0 165 aa11.36□□□□□ -0.59
PABPN1-203ENST00000553960 WDR27A2RRH5 827 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms