RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 AP1G2O75843 785 aa12.25□□□□□ -0.45
PRPF40B-212ENST00000551111 ZDHHC11BP0C7U3 371 aa12.25□□□□□ -0.45
PRPF40B-212ENST00000551111 PRR29P0C7W0 189 aa12.25□□□□□ -0.45
PRPF40B-212ENST00000551111 IRF1P10914 325 aa12.25□□□□□ -0.45
PRPF40B-212ENST00000551111 ADH5P11766 374 aa12.25□□□□□ -0.45
PRPF40B-212ENST00000551111 PPP3CCP48454 512 aa12.25□□□□□ -0.45
PRPF40B-212ENST00000551111 PDE6CP51160 858 aa12.25□□□□□ -0.45
PRPF40B-212ENST00000551111 SNRPFP62306 86 aaKnown RBP12.25□□□□□ -0.45
PRPF40B-212ENST00000551111 IRX4P78413 519 aa12.25□□□□□ -0.45
PRPF40B-212ENST00000551111 ELF2Q15723 593 aa12.25□□□□□ -0.45
PRPF40B-212ENST00000551111 ZNF667Q5HYK9 610 aa12.25□□□□□ -0.45
PRPF40B-212ENST00000551111 HECTD3Q5T447 861 aa12.25□□□□□ -0.45
PRPF40B-212ENST00000551111 ETFBKMTQ8IXQ9 262 aa12.25□□□□□ -0.45
PRPF40B-212ENST00000551111 OLIG1Q8TAK6 271 aa12.25□□□□□ -0.45
PRPF40B-212ENST00000551111 SNX21Q969T3 373 aa12.25□□□□□ -0.45
PRPF40B-212ENST00000551111 CNOT6LQ96LI5 555 aaKnown RBP12.25□□□□□ -0.45
PRPF40B-212ENST00000551111 EDEM2Q9BV94 578 aa12.25□□□□□ -0.45
PRPF40B-212ENST00000551111 MAGEF1Q9HAY2 307 aa12.25□□□□□ -0.45
PRPF40B-212ENST00000551111 ARHGEF4Q9NR80 690 aa12.25□□□□□ -0.45
PRPF40B-212ENST00000551111 KRT82Q9NSB4 513 aa12.25□□□□□ -0.45
PRPF40B-212ENST00000551111 FAM49BQ9NUQ9 324 aa12.25□□□□□ -0.45
PRPF40B-212ENST00000551111 TMEM74BQ9NUR3 256 aa12.25□□□□□ -0.45
PRPF40B-212ENST00000551111 RCOR1Q9UKL0 485 aa12.25□□□□□ -0.45
PRPF40B-212ENST00000551111 NUMA1Q14980 2115 aa12.25□□□□□ -0.45
PRPF40B-212ENST00000551111 CHD6Q8TD26 2715 aa12.24□□□□□ -0.45
PRPF40B-212ENST00000551111 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.24□□□□□ -0.45
PRPF40B-212ENST00000551111 FAM92AA1XBS5 289 aa12.24□□□□□ -0.45
PRPF40B-212ENST00000551111 HHLA1C9JL84 531 aa12.24□□□□□ -0.45
PRPF40B-212ENST00000551111 MDM4O15151 490 aa12.24□□□□□ -0.45
PRPF40B-212ENST00000551111 FOXD2O60548 495 aaPredicted RBP12.24□□□□□ -0.45
PRPF40B-212ENST00000551111 RHOBTB1O94844 696 aa12.24□□□□□ -0.45
PRPF40B-212ENST00000551111 CLSTN1O94985 981 aa12.24□□□□□ -0.45
PRPF40B-212ENST00000551111 RTN3O95197 1032 aaPredicted RBP12.24□□□□□ -0.45
PRPF40B-212ENST00000551111 TOP3BO95985 862 aaKnown RBP12.24□□□□□ -0.45
PRPF40B-212ENST00000551111 APODP05090 189 aa12.24□□□□□ -0.45
PRPF40B-212ENST00000551111 SLFN14P0C7P3 912 aa12.24□□□□□ -0.45
PRPF40B-212ENST00000551111 WASP42768 502 aa12.24□□□□□ -0.45
PRPF40B-212ENST00000551111 PTGER3P43115 390 aa12.24□□□□□ -0.45
PRPF40B-212ENST00000551111 DHPSP49366 369 aaPredicted RBP12.24□□□□□ -0.45
PRPF40B-212ENST00000551111 NDST1P52848 882 aa12.24□□□□□ -0.45
PRPF40B-212ENST00000551111 MAP3K7CLP57077 242 aa12.24□□□□□ -0.45
PRPF40B-212ENST00000551111 MRPS21P82921 87 aaKnown RBP12.24□□□□□ -0.45
PRPF40B-212ENST00000551111 ST3GAL2Q16842 350 aa12.24□□□□□ -0.45
PRPF40B-212ENST00000551111 USP39Q53GS9 565 aaKnown RBP12.24□□□□□ -0.45
PRPF40B-212ENST00000551111 SNX30Q5VWJ9 437 aa12.24□□□□□ -0.45
PRPF40B-212ENST00000551111 PSAPL1Q6NUJ1 521 aa12.24□□□□□ -0.45
PRPF40B-212ENST00000551111 SV2AQ7L0J3 742 aa12.24□□□□□ -0.45
PRPF40B-212ENST00000551111 ARMCX6Q7L4S7 300 aa12.24□□□□□ -0.45
PRPF40B-212ENST00000551111 TMEFF1Q8IYR6 380 aa12.24□□□□□ -0.45
PRPF40B-212ENST00000551111 DEFB119Q8N690 84 aa12.24□□□□□ -0.45
PRPF40B-212ENST00000551111 KNL1Q8NG31 2342 aa12.24□□□□□ -0.45
PRPF40B-212ENST00000551111 SLC2A14Q8TDB8 520 aa12.24□□□□□ -0.45
PRPF40B-212ENST00000551111 EXOC4Q96A65 974 aa12.24□□□□□ -0.45
PRPF40B-212ENST00000551111 JAKMIP2Q96AA8 810 aa12.24□□□□□ -0.45
PRPF40B-212ENST00000551111 PCDH15Q96QU1 1955 aa12.24□□□□□ -0.45
PRPF40B-212ENST00000551111 ACOX2Q99424 681 aa12.24□□□□□ -0.45
PRPF40B-212ENST00000551111 APOBEC3GQ9HC16 384 aaKnown RBP12.24□□□□□ -0.45
PRPF40B-212ENST00000551111 DMAP1Q9NPF5 467 aaPredicted RBP12.24□□□□□ -0.45
PRPF40B-212ENST00000551111 FSCN3Q9NQT6 498 aa12.24□□□□□ -0.45
PRPF40B-212ENST00000551111 FAM13BQ9NYF5 915 aa12.24□□□□□ -0.45
PRPF40B-212ENST00000551111 EHD2Q9NZN4 543 aa12.24□□□□□ -0.45
PRPF40B-212ENST00000551111 NUDT5Q9UKK9 219 aa12.24□□□□□ -0.45
PRPF40B-212ENST00000551111 ZZEF1O43149 2961 aa12.23□□□□□ -0.45
PRPF40B-212ENST00000551111 E2F8A0AVK6 867 aa12.23□□□□□ -0.45
PRPF40B-212ENST00000551111 SLC9A3R1O14745 358 aaPredicted RBP12.23□□□□□ -0.45
PRPF40B-212ENST00000551111 TULP3O75386 442 aa12.23□□□□□ -0.45
PRPF40B-212ENST00000551111 HLA-DRAP01903 254 aa12.23□□□□□ -0.45
PRPF40B-212ENST00000551111 NR3C1P04150 777 aa12.23□□□□□ -0.45
PRPF40B-212ENST00000551111 PFKFB1P16118 471 aa12.23□□□□□ -0.45
PRPF40B-212ENST00000551111 SPINK2P20155 84 aa12.23□□□□□ -0.45
PRPF40B-212ENST00000551111 ADORA2BP29275 332 aa12.23□□□□□ -0.45
PRPF40B-212ENST00000551111 P2RY2P41231 377 aa12.23□□□□□ -0.45
PRPF40B-212ENST00000551111 GRIA2P42262 883 aa12.23□□□□□ -0.45
PRPF40B-212ENST00000551111 ASPAP45381 313 aa12.23□□□□□ -0.45
PRPF40B-212ENST00000551111 MAP7D1Q3KQU3 841 aa12.23□□□□□ -0.45
PRPF40B-212ENST00000551111 ZACNQ401N2 412 aa12.23□□□□□ -0.45
PRPF40B-212ENST00000551111 SLC9A9Q8IVB4 645 aa12.23□□□□□ -0.45
PRPF40B-212ENST00000551111 CRYBG2Q8N1P7 616 aa12.23□□□□□ -0.45
PRPF40B-212ENST00000551111 HMGB4Q8WW32 186 aa12.23□□□□□ -0.45
PRPF40B-212ENST00000551111 PIGKQ92643 395 aa12.23□□□□□ -0.45
PRPF40B-212ENST00000551111 SMARCD1Q96GM5 515 aa12.23□□□□□ -0.45
PRPF40B-212ENST00000551111 NMUR1Q9HB89 426 aa12.23□□□□□ -0.45
PRPF40B-212ENST00000551111 CSNK1G1Q9HCP0 422 aa12.23□□□□□ -0.45
PRPF40B-212ENST00000551111 CD93Q9NPY3 652 aa12.23□□□□□ -0.45
PRPF40B-212ENST00000551111 SPHK2Q9NRA0 654 aa12.23□□□□□ -0.45
PRPF40B-212ENST00000551111 CGNQ9P2M7 1197 aaKnown RBP12.23□□□□□ -0.45
PRPF40B-212ENST00000551111 RALYQ9UKM9 306 aaKnown RBP12.23□□□□□ -0.45
PRPF40B-212ENST00000551111 CIZ1Q9ULV3 898 aaPredicted RBP12.23□□□□□ -0.45
PRPF40B-212ENST00000551111 ZDHHC9Q9Y397 364 aa12.23□□□□□ -0.45
PRPF40B-212ENST00000551111 IGF2RP11717 2491 aa12.23□□□□□ -0.45
PRPF40B-212ENST00000551111 ATXN2Q99700 1313 aaKnown RBP12.22□□□□□ -0.45
PRPF40B-212ENST00000551111 TCRBV21S2A2A0A5A6 115 aa12.22□□□□□ -0.45
PRPF40B-212ENST00000551111 CYP26A1O43174 497 aa12.22□□□□□ -0.45
PRPF40B-212ENST00000551111 TLR5O60602 858 aa12.22□□□□□ -0.45
PRPF40B-212ENST00000551111 ADH1CP00326 375 aa12.22□□□□□ -0.45
PRPF40B-212ENST00000551111 ASS1P00966 412 aaKnown RBP12.22□□□□□ -0.45
PRPF40B-212ENST00000551111 TRIM49P0CI25 452 aa12.22□□□□□ -0.45
PRPF40B-212ENST00000551111 TRIM49CP0CI26 452 aa12.22□□□□□ -0.45
PRPF40B-212ENST00000551111 EIF2DP41214 584 aaKnown RBP12.22□□□□□ -0.45
PRPF40B-212ENST00000551111 TNFRSF4P43489 277 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms