RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 NR3C1P04150 777 aa12.6□□□□□ -0.39
GABPB1-206ENST00000543881 RPN1P04843 607 aaKnown RBP12.6□□□□□ -0.39
GABPB1-206ENST00000543881 TCF3P15923 654 aa12.6□□□□□ -0.39
GABPB1-206ENST00000543881 ENGP17813 658 aa12.6□□□□□ -0.39
GABPB1-206ENST00000543881 ANXA13P27216 316 aa12.6□□□□□ -0.39
GABPB1-206ENST00000543881 OPRD1P41143 372 aa12.6□□□□□ -0.39
GABPB1-206ENST00000543881 P2RY2P41231 377 aa12.6□□□□□ -0.39
GABPB1-206ENST00000543881 SIM1P81133 766 aaPredicted RBP12.6□□□□□ -0.39
GABPB1-206ENST00000543881 BIRC3Q13489 604 aa12.6□□□□□ -0.39
GABPB1-206ENST00000543881 NCOA4Q13772 614 aa12.6□□□□□ -0.39
GABPB1-206ENST00000543881 KCNB1Q14721 858 aa12.6□□□□□ -0.39
GABPB1-206ENST00000543881 ZNF699Q32M78 642 aa12.6□□□□□ -0.39
GABPB1-206ENST00000543881 C1orf220Q5T0J3 134 aa12.6□□□□□ -0.39
GABPB1-206ENST00000543881 PAQR9Q6ZVX9 377 aa12.6□□□□□ -0.39
GABPB1-206ENST00000543881 ARMCX6Q7L4S7 300 aa12.6□□□□□ -0.39
GABPB1-206ENST00000543881 SYT12Q8IV01 421 aa12.6□□□□□ -0.39
GABPB1-206ENST00000543881 TMEFF1Q8IYR6 380 aa12.6□□□□□ -0.39
GABPB1-206ENST00000543881 OLIG1Q8TAK6 271 aa12.6□□□□□ -0.39
GABPB1-206ENST00000543881 TMEM74BQ9NUR3 256 aa12.6□□□□□ -0.39
GABPB1-206ENST00000543881 TRPM5Q9NZQ8 1165 aa12.6□□□□□ -0.39
GABPB1-206ENST00000543881 USP25Q9UHP3 1055 aa12.6□□□□□ -0.39
GABPB1-206ENST00000543881 CIZ1Q9ULV3 898 aaPredicted RBP12.6□□□□□ -0.39
GABPB1-206ENST00000543881 HELZP42694 1942 aaKnown RBP12.6□□□□□ -0.39
GABPB1-206ENST00000543881 OLFM2O95897 454 aa12.59□□□□□ -0.39
GABPB1-206ENST00000543881 HNRNPLP14866 589 aaKnown RBP eCLIP12.59□□□□□ -0.392e-7■■■■□ 24.6
GABPB1-206ENST00000543881 PTGER3P43115 390 aa12.59□□□□□ -0.39
GABPB1-206ENST00000543881 SYKP43405 635 aa12.59□□□□□ -0.39
GABPB1-206ENST00000543881 AP3M2P53677 418 aa12.59□□□□□ -0.39
GABPB1-206ENST00000543881 KRT85P78386 507 aa12.59□□□□□ -0.39
GABPB1-206ENST00000543881 MRPS21P82921 87 aaKnown RBP12.59□□□□□ -0.39
GABPB1-206ENST00000543881 TAF10Q12962 218 aa12.59□□□□□ -0.39
GABPB1-206ENST00000543881 SEMA3BQ13214 749 aa12.59□□□□□ -0.39
GABPB1-206ENST00000543881 ZACNQ401N2 412 aa12.59□□□□□ -0.39
GABPB1-206ENST00000543881 TMEM92Q6UXU6 159 aa12.59□□□□□ -0.39
GABPB1-206ENST00000543881 SCARA5Q6ZMJ2 495 aa12.59□□□□□ -0.39
GABPB1-206ENST00000543881 PIP4P1Q86T03 277 aa12.59□□□□□ -0.39
GABPB1-206ENST00000543881 FRMD1Q8N878 549 aa12.59□□□□□ -0.39
GABPB1-206ENST00000543881 SPACA7Q96KW9 195 aa12.59□□□□□ -0.39
GABPB1-206ENST00000543881 KCNK16Q96T55 309 aa12.59□□□□□ -0.39
GABPB1-206ENST00000543881 ELOVL4Q9GZR5 314 aa12.59□□□□□ -0.39
GABPB1-206ENST00000543881 GOLPH3LQ9H4A5 285 aa12.59□□□□□ -0.39
GABPB1-206ENST00000543881 GON4LQ3T8J9 2241 aa12.59□□□□□ -0.39
GABPB1-206ENST00000543881 CACNA1EQ15878 2313 aa12.59□□□□□ -0.39
GABPB1-206ENST00000543881 ADAMTS9Q9P2N4 1935 aa12.59□□□□□ -0.39
GABPB1-206ENST00000543881 DSPP15924 2871 aaKnown RBP12.59□□□□□ -0.39
GABPB1-206ENST00000543881 UPK3BL1B0FP48 263 aa12.59□□□□□ -0.39
GABPB1-206ENST00000543881 UPK3BL2E5RIL1 263 aa12.59□□□□□ -0.39
GABPB1-206ENST00000543881 TAF4O00268 1085 aa12.59□□□□□ -0.39
GABPB1-206ENST00000543881 LEFTY2O00292 366 aa12.59□□□□□ -0.39
GABPB1-206ENST00000543881 OAS1P00973 400 aaKnown RBP12.59□□□□□ -0.39
GABPB1-206ENST00000543881 MYL1P05976 194 aa12.59□□□□□ -0.39
GABPB1-206ENST00000543881 SLC7A9P82251 487 aa12.59□□□□□ -0.39
GABPB1-206ENST00000543881 DPYDQ12882 1025 aa12.59□□□□□ -0.39
GABPB1-206ENST00000543881 IFRD2Q12894 506 aaPredicted RBP12.59□□□□□ -0.39
GABPB1-206ENST00000543881 GAB4Q2WGN9 574 aa12.59□□□□□ -0.39
GABPB1-206ENST00000543881 ZNF667Q5HYK9 610 aa12.59□□□□□ -0.39
GABPB1-206ENST00000543881 LYSMD4Q5XG99 296 aa12.59□□□□□ -0.39
GABPB1-206ENST00000543881 SLC23A3Q6PIS1 610 aa12.59□□□□□ -0.39
GABPB1-206ENST00000543881 SV2AQ7L0J3 742 aa12.59□□□□□ -0.39
GABPB1-206ENST00000543881 TXNDC5Q8NBS9 432 aaKnown RBP12.59□□□□□ -0.39
GABPB1-206ENST00000543881 TMC2Q8TDI7 906 aa12.59□□□□□ -0.39
GABPB1-206ENST00000543881 WHAMMQ8TF30 809 aa12.59□□□□□ -0.39
GABPB1-206ENST00000543881 HMGXB4Q9UGU5 601 aa12.59□□□□□ -0.39
GABPB1-206ENST00000543881 TRAF3IP3Q9Y228 551 aa12.59□□□□□ -0.39
GABPB1-206ENST00000543881 GTF3C3Q9Y5Q9 886 aa12.59□□□□□ -0.39
GABPB1-206ENST00000543881 ANKRD11Q6UB99 2663 aaPredicted RBP12.58□□□□□ -0.4
GABPB1-206ENST00000543881 NBEAQ8NFP9 2946 aa12.58□□□□□ -0.4
GABPB1-206ENST00000543881 ADAMTS20P59510 1910 aa12.58□□□□□ -0.4
GABPB1-206ENST00000543881 PLXND1Q9Y4D7 1925 aa12.58□□□□□ -0.4
GABPB1-206ENST00000543881 H0Y626 953 aa12.58□□□□□ -0.4
GABPB1-206ENST00000543881 SCAMP3O14828 347 aaKnown RBP12.58□□□□□ -0.4
GABPB1-206ENST00000543881 RHOBTB3O94955 611 aa12.58□□□□□ -0.4
GABPB1-206ENST00000543881 TRIM16O95361 564 aa12.58□□□□□ -0.4
GABPB1-206ENST00000543881 KLF8O95600 359 aaPredicted RBP12.58□□□□□ -0.4
GABPB1-206ENST00000543881 ABL1P00519 1130 aa12.58□□□□□ -0.4
GABPB1-206ENST00000543881 CFIP05156 583 aa12.58□□□□□ -0.4
GABPB1-206ENST00000543881 PFKLP17858 780 aa12.58□□□□□ -0.4
GABPB1-206ENST00000543881 RDXP35241 583 aaKnown RBP12.58□□□□□ -0.4
GABPB1-206ENST00000543881 PPP3CCP48454 512 aa12.58□□□□□ -0.4
GABPB1-206ENST00000543881 ORC1Q13415 861 aa12.58□□□□□ -0.4
GABPB1-206ENST00000543881 CEP135Q66GS9 1140 aa12.58□□□□□ -0.4
GABPB1-206ENST00000543881 SPOPLQ6IQ16 392 aa12.58□□□□□ -0.4
GABPB1-206ENST00000543881 ACOT1Q86TX2 421 aa12.58□□□□□ -0.4
GABPB1-206ENST00000543881 FAM35AQ86V20 835 aa12.58□□□□□ -0.4
GABPB1-206ENST00000543881 SFTPA1Q8IWL2 248 aa12.58□□□□□ -0.4
GABPB1-206ENST00000543881 FUKQ8N0W3 1084 aa12.58□□□□□ -0.4
GABPB1-206ENST00000543881 NUP93Q8N1F7 819 aa12.58□□□□□ -0.4
GABPB1-206ENST00000543881 CHCHD4Q8N4Q1 142 aa12.58□□□□□ -0.4
GABPB1-206ENST00000543881 ALLCQ8N6M5 410 aa12.58□□□□□ -0.4
GABPB1-206ENST00000543881 ZMIZ2Q8NF64 920 aa12.58□□□□□ -0.4
GABPB1-206ENST00000543881 SCAMP5Q8TAC9 235 aa12.58□□□□□ -0.4
GABPB1-206ENST00000543881 GDPD2Q9HCC8 539 aa12.58□□□□□ -0.4
GABPB1-206ENST00000543881 POLMQ9NP87 494 aaPredicted RBP12.58□□□□□ -0.4
GABPB1-206ENST00000543881 FSCN3Q9NQT6 498 aa12.58□□□□□ -0.4
GABPB1-206ENST00000543881 SMPD4Q9NXE4 827 aa12.58□□□□□ -0.4
GABPB1-206ENST00000543881 EHD2Q9NZN4 543 aa12.58□□□□□ -0.4
GABPB1-206ENST00000543881 BCCIPQ9P287 314 aaKnown RBP eCLIP12.58□□□□□ -0.4
GABPB1-206ENST00000543881 MBD1Q9UIS9 605 aaPredicted RBP12.58□□□□□ -0.4
GABPB1-206ENST00000543881 MAPK8IP1Q9UQF2 711 aa12.58□□□□□ -0.4
GABPB1-206ENST00000543881 CPQQ9Y646 472 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms