RNA–Protein interactions for RNA: ENST00000533585.5

C11orf54-213, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 4

Gene C11orf54, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-213ENST00000533585 CNTN6Q9UQ52 1028 aa4.89□□□□□ -1.63
C11orf54-213ENST00000533585 KIF3AQ9Y496 699 aa4.89□□□□□ -1.63
C11orf54-213ENST00000533585 POMT1Q9Y6A1 747 aa4.89□□□□□ -1.63
C11orf54-213ENST00000533585 KCNE2Q9Y6J6 123 aa4.89□□□□□ -1.63
C11orf54-213ENST00000533585 KDM3AQ9Y4C1 1321 aa4.89□□□□□ -1.63
C11orf54-213ENST00000533585 TRAV34A0A0B4J273 112 aa4.88□□□□□ -1.63
C11orf54-213ENST00000533585 PNMA6EA0A0J9YXQ4 647 aa4.88□□□□□ -1.63
C11orf54-213ENST00000533585 hCG_1809904A0A1W2PP81 198 aa4.88□□□□□ -1.63
C11orf54-213ENST00000533585 A0A1W2PPE2 198 aa4.88□□□□□ -1.63
C11orf54-213ENST00000533585 A0A1W2PR64 198 aa4.88□□□□□ -1.63
C11orf54-213ENST00000533585 GNAT3A8MTJ3 354 aa4.88□□□□□ -1.63
C11orf54-213ENST00000533585 TMEM232C9JQI7 657 aa4.88□□□□□ -1.63
C11orf54-213ENST00000533585 J3KTA2 159 aa4.88□□□□□ -1.63
C11orf54-213ENST00000533585 SEPT4O43236 478 aa4.88□□□□□ -1.63
C11orf54-213ENST00000533585 PROM1O43490 865 aa4.88□□□□□ -1.63
C11orf54-213ENST00000533585 CCNT2O60583 730 aaKnown RBP4.88□□□□□ -1.63
C11orf54-213ENST00000533585 NOL3O60936 208 aaKnown RBP4.88□□□□□ -1.63
C11orf54-213ENST00000533585 SNX4O95219 450 aa4.88□□□□□ -1.63
C11orf54-213ENST00000533585 KIF20AO95235 890 aa4.88□□□□□ -1.63
C11orf54-213ENST00000533585 MPIG6BO95866 241 aa4.88□□□□□ -1.63
C11orf54-213ENST00000533585 GRPP07492 148 aa4.88□□□□□ -1.63
C11orf54-213ENST00000533585 SNRPA1P09661 255 aaKnown RBP4.88□□□□□ -1.63
C11orf54-213ENST00000533585 CYP2A6P11509 494 aaPredicted RBP4.88□□□□□ -1.63
C11orf54-213ENST00000533585 ALADP13716 330 aa4.88□□□□□ -1.63
C11orf54-213ENST00000533585 PTGS1P23219 599 aa4.88□□□□□ -1.63
C11orf54-213ENST00000533585 PRKCHP24723 683 aa4.88□□□□□ -1.63
C11orf54-213ENST00000533585 MST1P26927 711 aa4.88□□□□□ -1.63
C11orf54-213ENST00000533585 APEX1P27695 318 aaKnown RBP4.88□□□□□ -1.63
C11orf54-213ENST00000533585 SREBF1P36956 1147 aa4.88□□□□□ -1.63
C11orf54-213ENST00000533585 SLC6A11P48066 632 aa4.88□□□□□ -1.63
C11orf54-213ENST00000533585 GPC3P51654 580 aa4.88□□□□□ -1.63
C11orf54-213ENST00000533585 RRP1P56182 461 aaKnown RBP4.88□□□□□ -1.63
C11orf54-213ENST00000533585 YBEYP58557 167 aaPredicted RBP4.88□□□□□ -1.63
C11orf54-213ENST00000533585 EIF4A1P60842 406 aaKnown RBP4.88□□□□□ -1.63
C11orf54-213ENST00000533585 ZBTB16Q05516 673 aa4.88□□□□□ -1.63
C11orf54-213ENST00000533585 TBL3Q12788 808 aaKnown RBP4.88□□□□□ -1.63
C11orf54-213ENST00000533585 NFATC3Q12968 1075 aa4.88□□□□□ -1.63
C11orf54-213ENST00000533585 RPA4Q13156 261 aa4.88□□□□□ -1.63
C11orf54-213ENST00000533585 RABEP1Q15276 862 aa4.88□□□□□ -1.63
C11orf54-213ENST00000533585 MST1LQ2TV78 715 aa4.88□□□□□ -1.63
C11orf54-213ENST00000533585 DGAT2L7PQ6IED9 249 aa4.88□□□□□ -1.63
C11orf54-213ENST00000533585 TMEM154Q6P9G4 183 aa4.88□□□□□ -1.63
C11orf54-213ENST00000533585 KLHL35Q6PF15 583 aa4.88□□□□□ -1.63
C11orf54-213ENST00000533585 TRAT1Q6PIZ9 186 aa4.88□□□□□ -1.63
C11orf54-213ENST00000533585 CRELD2Q6UXH1 353 aaPredicted RBP4.88□□□□□ -1.63
C11orf54-213ENST00000533585 SYNE3Q6ZMZ3 975 aa4.88□□□□□ -1.63
C11orf54-213ENST00000533585 PLPPR4Q7Z2D5 763 aa4.88□□□□□ -1.63
C11orf54-213ENST00000533585 BMP8AQ7Z5Y6 402 aa4.88□□□□□ -1.63
C11orf54-213ENST00000533585 ADGRA1Q86SQ6 560 aa4.88□□□□□ -1.63
C11orf54-213ENST00000533585 FBXO11Q86XK2 927 aa4.88□□□□□ -1.63
C11orf54-213ENST00000533585 TUSC5Q8IXB3 177 aa4.88□□□□□ -1.63
C11orf54-213ENST00000533585 SYT2Q8N9I0 419 aaPredicted RBP4.88□□□□□ -1.63
C11orf54-213ENST00000533585 CHST13Q8NET6 341 aa4.88□□□□□ -1.63
C11orf54-213ENST00000533585 LINS1Q8NG48 757 aa4.88□□□□□ -1.63
C11orf54-213ENST00000533585 KIF18AQ8NI77 898 aa4.88□□□□□ -1.63
C11orf54-213ENST00000533585 WDR48Q8TAF3 677 aa4.88□□□□□ -1.63
C11orf54-213ENST00000533585 SPATA20Q8TB22 786 aa4.88□□□□□ -1.63
C11orf54-213ENST00000533585 FBLIM1Q8WUP2 373 aa4.88□□□□□ -1.63
C11orf54-213ENST00000533585 SNX33Q8WV41 574 aa4.88□□□□□ -1.63
C11orf54-213ENST00000533585 POMGNT1Q8WZA1 660 aa4.88□□□□□ -1.63
C11orf54-213ENST00000533585 RAPGEF4Q8WZA2 1011 aa4.88□□□□□ -1.63
C11orf54-213ENST00000533585 SYAP1Q96A49 352 aaPredicted RBP4.88□□□□□ -1.63
C11orf54-213ENST00000533585 SLC22A18Q96BI1 424 aa4.88□□□□□ -1.63
C11orf54-213ENST00000533585 CMTM3Q96MX0 182 aa4.88□□□□□ -1.63
C11orf54-213ENST00000533585 MED15Q96RN5 788 aa4.88□□□□□ -1.63
C11orf54-213ENST00000533585 HTATIP2Q9BUP3 242 aa4.88□□□□□ -1.63
C11orf54-213ENST00000533585 PHF7Q9BWX1 381 aaPredicted RBP4.88□□□□□ -1.63
C11orf54-213ENST00000533585 TAOK3Q9H2K8 898 aa4.88□□□□□ -1.63
C11orf54-213ENST00000533585 RMI1Q9H9A7 625 aa4.88□□□□□ -1.63
C11orf54-213ENST00000533585 UNKLQ9H9P5 680 aaKnown RBP4.88□□□□□ -1.63
C11orf54-213ENST00000533585 BCO1Q9HAY6 547 aa4.88□□□□□ -1.63
C11orf54-213ENST00000533585 LANCL2Q9NS86 450 aa4.88□□□□□ -1.63
C11orf54-213ENST00000533585 GIMAP4Q9NUV9 329 aa4.88□□□□□ -1.63
C11orf54-213ENST00000533585 CFAP97Q9P2B7 532 aa4.88□□□□□ -1.63
C11orf54-213ENST00000533585 ACSL6Q9UKU0 697 aa4.88□□□□□ -1.63
C11orf54-213ENST00000533585 TBC1D30Q9Y2I9 924 aa4.88□□□□□ -1.63
C11orf54-213ENST00000533585 GDAQ9Y2T3 454 aa4.88□□□□□ -1.63
C11orf54-213ENST00000533585 PLEKHM1Q9Y4G2 1056 aa4.88□□□□□ -1.63
C11orf54-213ENST00000533585 A0A1W2PQ27 194 aa4.87□□□□□ -1.63
C11orf54-213ENST00000533585 A0A1W2PQ64 194 aa4.87□□□□□ -1.63
C11orf54-213ENST00000533585 A0A1W2PQC6 194 aa4.87□□□□□ -1.63
C11orf54-213ENST00000533585 A0A1W2PQD8 194 aa4.87□□□□□ -1.63
C11orf54-213ENST00000533585 A0A1W2PR48 441 aa4.87□□□□□ -1.63
C11orf54-213ENST00000533585 RGSL1A5PLK6 1076 aa4.87□□□□□ -1.63
C11orf54-213ENST00000533585 URADA6NGE7 173 aa4.87□□□□□ -1.63
C11orf54-213ENST00000533585 FAM90A20PA6NIJ5 464 aa4.87□□□□□ -1.63
C11orf54-213ENST00000533585 WASH4PA8MWX3 477 aa4.87□□□□□ -1.63
C11orf54-213ENST00000533585 H7C4K7 107 aa4.87□□□□□ -1.63
C11orf54-213ENST00000533585 ZNF263O14978 683 aa4.87□□□□□ -1.63
C11orf54-213ENST00000533585 PGRMC2O15173 223 aa4.87□□□□□ -1.63
C11orf54-213ENST00000533585 PDHA1P08559 390 aa4.87□□□□□ -1.63
C11orf54-213ENST00000533585 WEE2P0C1S8 567 aa4.87□□□□□ -1.63
C11orf54-213ENST00000533585 FDPSP14324 419 aaKnown RBP4.87□□□□□ -1.63
C11orf54-213ENST00000533585 FAHP16930 419 aa4.87□□□□□ -1.63
C11orf54-213ENST00000533585 SP100P23497 879 aaPredicted RBP4.87□□□□□ -1.63
C11orf54-213ENST00000533585 CPT2P23786 658 aa4.87□□□□□ -1.63
C11orf54-213ENST00000533585 PTAFRP25105 342 aa4.87□□□□□ -1.63
C11orf54-213ENST00000533585 HOXA11P31270 313 aaPredicted RBP4.87□□□□□ -1.63
C11orf54-213ENST00000533585 SLC5A2P31639 672 aa4.87□□□□□ -1.63
C11orf54-213ENST00000533585 MSX2P35548 267 aaPredicted RBP4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms