RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 SEPT3Q9UH03 358 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 CPSF3Q9UKF6 684 aaKnown RBP6.8□□□□□ -1.32
SDC2-208ENST00000523877 RPH3AQ9Y2J0 694 aaPredicted RBP6.8□□□□□ -1.32
SDC2-208ENST00000523877 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.8□□□□□ -1.32
SDC2-208ENST00000523877 PCDHGA3Q9Y5H0 932 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 HEY1Q9Y5J3 304 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 AK5Q9Y6K8 562 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 PIAS3Q9Y6X2 628 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 CPDO75976 1380 aa6.8□□□□□ -1.32
SDC2-208ENST00000523877 MADDQ8WXG6 1647 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 CEP162Q5TB80 1403 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 A0A088AWK7 358 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.79□□□□□ -1.32
SDC2-208ENST00000523877 LOC100506127A0A0U1RQW1 187 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 TTC26A0AVF1 554 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 PGPEP1LA6NFU8 196 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 ARGFXA6NJG6 315 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 E9PBE3 544 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 PSMA7O14818 248 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 ATP2A1O14983 1001 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 SHOXO15266 292 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 SLC25A17O43808 307 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 FZD6O60353 706 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 SERPINB7O75635 380 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 PIGNO95427 931 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 GGPS1O95749 300 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 GALTP07902 379 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 CFHP08603 1231 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 CPA1P15085 419 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 HOXB8P17481 243 aaPredicted RBP6.79□□□□□ -1.32
SDC2-208ENST00000523877 MC4RP32245 332 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 CCR1P32246 355 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 GPC1P35052 558 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 ACAA2P42765 397 aaKnown RBP6.79□□□□□ -1.32
SDC2-208ENST00000523877 DHPSP49366 369 aaPredicted RBP6.79□□□□□ -1.32
SDC2-208ENST00000523877 PCYT1AP49585 367 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 HARS2P49590 506 aaKnown RBP6.79□□□□□ -1.32
SDC2-208ENST00000523877 RGS19P49795 217 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 GBX2P52951 348 aaPredicted RBP6.79□□□□□ -1.32
SDC2-208ENST00000523877 P2RX3P56373 397 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 RNASE9P60153 205 aaKnown RBP6.79□□□□□ -1.32
SDC2-208ENST00000523877 GMFBP60983 142 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 FOXK2Q01167 660 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 ZNF177Q13360 481 aaPredicted RBP6.79□□□□□ -1.32
SDC2-208ENST00000523877 CAPRIN1Q14444 709 aaKnown RBP6.79□□□□□ -1.32
SDC2-208ENST00000523877 SLC39A14Q15043 492 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 PON2Q15165 354 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 PLA2G4EQ3MJ16 856 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 KCTD21Q4G0X4 260 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 LACTB2Q53H82 288 aaPredicted RBP6.79□□□□□ -1.32
SDC2-208ENST00000523877 C1orf141Q5JVX7 400 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 LIN9Q5TKA1 542 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 SPRYD7Q5W111 196 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 ALG1LQ6GMV1 187 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 WDR93Q6P2C0 686 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 FOXR2Q6PJQ5 311 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 C4orf22Q6V702 233 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 IDO2Q6ZQW0 420 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 UTS2BQ765I0 119 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 TRMT10CQ7L0Y3 403 aaKnown RBP6.79□□□□□ -1.32
SDC2-208ENST00000523877 EPM2AIP1Q7L775 607 aaPredicted RBP6.79□□□□□ -1.32
SDC2-208ENST00000523877 TPRA1Q86W33 373 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 TICAM1Q8IUC6 712 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.79□□□□□ -1.32
SDC2-208ENST00000523877 PM20D2Q8IYS1 436 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 DEPDC4Q8N2C3 294 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 BBS5Q8N3I7 341 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 LZTR1Q8N653 840 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 ANKRD13CQ8N6S4 541 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 CNTD1Q8N815 330 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 ZSCAN1Q8NBB4 408 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 RBBP8NLQ8NC74 664 aaPredicted RBP6.79□□□□□ -1.32
SDC2-208ENST00000523877 HIPK4Q8NE63 616 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 EXD1Q8NHP7 514 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 FAM71BQ8TC56 605 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 NSMCE1Q8WV22 266 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 HEXDCQ8WVB3 486 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 NELFBQ8WX92 580 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 NCSTNQ92542 709 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 LENG1Q96BZ8 264 aaPredicted RBP6.79□□□□□ -1.32
SDC2-208ENST00000523877 MAGED4Q96JG8 741 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 TRIM47Q96LD4 638 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 DMRTB1Q96MA1 342 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 USB1Q9BQ65 265 aaKnown RBP6.79□□□□□ -1.32
SDC2-208ENST00000523877 CCM2Q9BSQ5 444 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 UNKQ9C0B0 810 aaKnown RBP6.79□□□□□ -1.32
SDC2-208ENST00000523877 RSAD1Q9HA92 442 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 C17orf75Q9HAS0 396 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 IL1RAPL2Q9NP60 686 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 DNAJB4Q9UDY4 337 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 GGA1Q9UJY5 639 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 SPATA2Q9UM82 520 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 APOBEC2Q9Y235 224 aaKnown RBP6.79□□□□□ -1.32
SDC2-208ENST00000523877 AP3M1Q9Y2T2 418 aa6.79□□□□□ -1.32
SDC2-208ENST00000523877 SOS2Q07890 1332 aaPredicted RBP6.78□□□□□ -1.32
SDC2-208ENST00000523877 A0A1B0GTQ1 180 aa6.78□□□□□ -1.32
SDC2-208ENST00000523877 A0A1W2PQ67 120 aa6.78□□□□□ -1.32
SDC2-208ENST00000523877 SMCO2A6NFE2 343 aa6.78□□□□□ -1.32
SDC2-208ENST00000523877 TMEM210A6NLX4 147 aa6.78□□□□□ -1.32
SDC2-208ENST00000523877 NUDT19A8MXV4 375 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms