RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 ANKRD35Q8N283 1001 aa7.85□□□□□ -1.15
HDAC3-216ENST00000523088 LIX1Q8N485 282 aa7.85□□□□□ -1.15
HDAC3-216ENST00000523088 TTLQ8NG68 377 aa7.85□□□□□ -1.15
HDAC3-216ENST00000523088 BSNDQ8WZ55 320 aa7.85□□□□□ -1.15
HDAC3-216ENST00000523088 ESR2Q92731 530 aa7.85□□□□□ -1.15
HDAC3-216ENST00000523088 HAUS1Q96CS2 278 aa7.85□□□□□ -1.15
HDAC3-216ENST00000523088 ZNF560Q96MR9 790 aa7.85□□□□□ -1.15
HDAC3-216ENST00000523088 OPALINQ96PE5 141 aa7.85□□□□□ -1.15
HDAC3-216ENST00000523088 YME1L1Q96TA2 773 aa7.85□□□□□ -1.15
HDAC3-216ENST00000523088 SEC62Q99442 399 aaKnown RBP7.85□□□□□ -1.15
HDAC3-216ENST00000523088 GDF15Q99988 308 aa7.85□□□□□ -1.15
HDAC3-216ENST00000523088 DDX50Q9BQ39 737 aaKnown RBP7.85□□□□□ -1.15
HDAC3-216ENST00000523088 SENP6Q9GZR1 1112 aaPredicted RBP7.85□□□□□ -1.15
HDAC3-216ENST00000523088 ABHD16BQ9H3Z7 469 aa7.85□□□□□ -1.15
HDAC3-216ENST00000523088 STN1Q9H668 368 aaKnown RBP7.85□□□□□ -1.15
HDAC3-216ENST00000523088 CAAP1Q9H8G2 361 aa7.85□□□□□ -1.15
HDAC3-216ENST00000523088 XPNPEP3Q9NQH7 507 aa7.85□□□□□ -1.15
HDAC3-216ENST00000523088 RHBDL2Q9NX52 303 aa7.85□□□□□ -1.15
HDAC3-216ENST00000523088 UBA2Q9UBT2 640 aaPredicted RBP7.85□□□□□ -1.15
HDAC3-216ENST00000523088 DPP7Q9UHL4 492 aa7.85□□□□□ -1.15
HDAC3-216ENST00000523088 DMRT1Q9Y5R6 373 aa7.85□□□□□ -1.15
HDAC3-216ENST00000523088 DNAH12Q6ZR08 3092 aa7.84□□□□□ -1.15
HDAC3-216ENST00000523088 SLC12A8A0AV02 714 aa7.84□□□□□ -1.15
HDAC3-216ENST00000523088 ANKRD34BA5PLL1 514 aa7.84□□□□□ -1.15
HDAC3-216ENST00000523088 OR6C74A6NCV1 312 aa7.84□□□□□ -1.15
HDAC3-216ENST00000523088 ASB14A6NK59 587 aa7.84□□□□□ -1.15
HDAC3-216ENST00000523088 CAPN14A8MX76 684 aa7.84□□□□□ -1.15
HDAC3-216ENST00000523088 CHURC1-FNTBB4DL54 471 aa7.84□□□□□ -1.15
HDAC3-216ENST00000523088 TK2O00142 265 aa7.84□□□□□ -1.15
HDAC3-216ENST00000523088 MYO1FO00160 1098 aa7.84□□□□□ -1.15
HDAC3-216ENST00000523088 NDUFA2O43678 99 aa7.84□□□□□ -1.15
HDAC3-216ENST00000523088 GATCO43716 136 aaKnown RBP7.84□□□□□ -1.15
HDAC3-216ENST00000523088 ADAM11O75078 769 aa7.84□□□□□ -1.15
HDAC3-216ENST00000523088 DUSP11O75319 330 aaKnown RBP7.84□□□□□ -1.15
HDAC3-216ENST00000523088 HRGP04196 525 aa7.84□□□□□ -1.15
HDAC3-216ENST00000523088 KRT7P08729 469 aa7.84□□□□□ -1.15
HDAC3-216ENST00000523088 HSPD1P10809 573 aaKnown RBP7.84□□□□□ -1.15
HDAC3-216ENST00000523088 POU3F3P20264 500 aaPredicted RBP7.84□□□□□ -1.15
HDAC3-216ENST00000523088 IFNA8P32881 189 aa7.84□□□□□ -1.15
HDAC3-216ENST00000523088 SLC26A3P40879 764 aa7.84□□□□□ -1.15
HDAC3-216ENST00000523088 STAT1P42224 750 aa7.84□□□□□ -1.15
HDAC3-216ENST00000523088 STAT6P42226 847 aa7.84□□□□□ -1.15
HDAC3-216ENST00000523088 SLC1A1P43005 524 aa7.84□□□□□ -1.15
HDAC3-216ENST00000523088 HSD17B4P51659 736 aa7.84□□□□□ -1.15
HDAC3-216ENST00000523088 GPR85P60893 370 aa7.84□□□□□ -1.15
HDAC3-216ENST00000523088 RAB14P61106 215 aa7.84□□□□□ -1.15
HDAC3-216ENST00000523088 CYP4F8P98187 520 aa7.84□□□□□ -1.15
HDAC3-216ENST00000523088 FOXO1Q12778 655 aa7.84□□□□□ -1.15
HDAC3-216ENST00000523088 ERV3-1Q14264 604 aa7.84□□□□□ -1.15
HDAC3-216ENST00000523088 NAA30Q147X3 362 aaPredicted RBP7.84□□□□□ -1.15
HDAC3-216ENST00000523088 MAJINQ3KP22 176 aa7.84□□□□□ -1.15
HDAC3-216ENST00000523088 GPATCH4Q5T3I0 446 aaKnown RBP7.84□□□□□ -1.15
HDAC3-216ENST00000523088 FAM102BQ5T8I3 360 aa7.84□□□□□ -1.15
HDAC3-216ENST00000523088 ALKBH5Q6P6C2 394 aaKnown RBP7.84□□□□□ -1.15
HDAC3-216ENST00000523088 PGM2L1Q6PCE3 622 aa7.84□□□□□ -1.15
HDAC3-216ENST00000523088 ITIH5Q86UX2 942 aa7.84□□□□□ -1.15
HDAC3-216ENST00000523088 LONP2Q86WA8 852 aa7.84□□□□□ -1.15
HDAC3-216ENST00000523088 VSIG1Q86XK7 387 aa7.84□□□□□ -1.15
HDAC3-216ENST00000523088 DNAAF5Q86Y56 855 aa7.84□□□□□ -1.15
HDAC3-216ENST00000523088 CROCCP3Q8IVE0 287 aa7.84□□□□□ -1.15
HDAC3-216ENST00000523088 FUKQ8N0W3 1084 aa7.84□□□□□ -1.15
HDAC3-216ENST00000523088 ARL14Q8N4G2 192 aa7.84□□□□□ -1.15
HDAC3-216ENST00000523088 LZTR1Q8N653 840 aa7.84□□□□□ -1.15
HDAC3-216ENST00000523088 DDHD1Q8NEL9 900 aa7.84□□□□□ -1.15
HDAC3-216ENST00000523088 LPCAT1Q8NF37 534 aa7.84□□□□□ -1.15
HDAC3-216ENST00000523088 HCAR2Q8TDS4 363 aa7.84□□□□□ -1.15
HDAC3-216ENST00000523088 RNF139Q8WU17 664 aa7.84□□□□□ -1.15
HDAC3-216ENST00000523088 AFG1LQ8WV93 481 aa7.84□□□□□ -1.15
HDAC3-216ENST00000523088 RILPL2Q969X0 211 aa7.84□□□□□ -1.15
HDAC3-216ENST00000523088 TUBGCP3Q96CW5 907 aa7.84□□□□□ -1.15
HDAC3-216ENST00000523088 RADILQ96JH8 1075 aa7.84□□□□□ -1.15
HDAC3-216ENST00000523088 CEP170P1Q96L14 293 aa7.84□□□□□ -1.15
HDAC3-216ENST00000523088 RUNDC3BQ96NL0 473 aa7.84□□□□□ -1.15
HDAC3-216ENST00000523088 NUP88Q99567 741 aaPredicted RBP7.84□□□□□ -1.15
HDAC3-216ENST00000523088 BPIFA3Q9BQP9 254 aa7.84□□□□□ -1.15
HDAC3-216ENST00000523088 CCDC77Q9BR77 488 aa7.84□□□□□ -1.15
HDAC3-216ENST00000523088 TBCDQ9BTW9 1192 aa7.84□□□□□ -1.15
HDAC3-216ENST00000523088 SARGQ9BW04 601 aa7.84□□□□□ -1.15
HDAC3-216ENST00000523088 TRIM15Q9C019 465 aa7.84□□□□□ -1.15
HDAC3-216ENST00000523088 DPH5Q9H2P9 285 aa7.84□□□□□ -1.15
HDAC3-216ENST00000523088 VIPAS39Q9H9C1 493 aa7.84□□□□□ -1.15
HDAC3-216ENST00000523088 LY9Q9HBG7 655 aa7.84□□□□□ -1.15
HDAC3-216ENST00000523088 PDE11AQ9HCR9 933 aa7.84□□□□□ -1.15
HDAC3-216ENST00000523088 WDR6Q9NNW5 1121 aaKnown RBP7.84□□□□□ -1.15
HDAC3-216ENST00000523088 TUFT1Q9NNX1 390 aa7.84□□□□□ -1.15
HDAC3-216ENST00000523088 VTA1Q9NP79 307 aa7.84□□□□□ -1.15
HDAC3-216ENST00000523088 TOPORSQ9NS56 1045 aaPredicted RBP7.84□□□□□ -1.15
HDAC3-216ENST00000523088 LMBRD1Q9NUN5 540 aa7.84□□□□□ -1.15
HDAC3-216ENST00000523088 SIRPGQ9P1W8 387 aa7.84□□□□□ -1.15
HDAC3-216ENST00000523088 TLK1Q9UKI8 766 aa7.84□□□□□ -1.15
HDAC3-216ENST00000523088 PYCARDQ9ULZ3 195 aa7.84□□□□□ -1.15
HDAC3-216ENST00000523088 USP20Q9Y2K6 914 aa7.84□□□□□ -1.15
HDAC3-216ENST00000523088 STARD13Q9Y3M8 1113 aa7.84□□□□□ -1.15
HDAC3-216ENST00000523088 PMF1-BGLAPU3KQ54 211 aa7.84□□□□□ -1.15
HDAC3-216ENST00000523088 LAMA3Q16787 3333 aa7.84□□□□□ -1.15
HDAC3-216ENST00000523088 LRRC37A2A6NM11 1700 aa7.83□□□□□ -1.16
HDAC3-216ENST00000523088 A0A0D9SFI3 127 aa7.83□□□□□ -1.16
HDAC3-216ENST00000523088 CCDC78A2IDD5 438 aa7.83□□□□□ -1.16
HDAC3-216ENST00000523088 E7ENQ6 273 aa7.83□□□□□ -1.16
HDAC3-216ENST00000523088 H0YIV9 168 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms