RNA–Protein interactions for RNA: ENST00000513314.1

DHFR-207, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-207ENST00000513314 BRIP1Q9BX63 1249 aa5.06□□□□□ -1.6
DHFR-207ENST00000513314 RTFDC1Q9BY42 306 aaPredicted RBP5.06□□□□□ -1.6
DHFR-207ENST00000513314 B3GNT5Q9BYG0 378 aa5.06□□□□□ -1.6
DHFR-207ENST00000513314 ZNF580Q9UK33 172 aa5.06□□□□□ -1.6
DHFR-207ENST00000513314 ZMYM2Q9UBW7 1377 aa5.05□□□□□ -1.6
DHFR-207ENST00000513314 FAM90A10PA6NDY2 464 aa5.05□□□□□ -1.6
DHFR-207ENST00000513314 CAPN8A6NHC0 703 aa5.05□□□□□ -1.6
DHFR-207ENST00000513314 TBX3O15119 743 aa5.05□□□□□ -1.6
DHFR-207ENST00000513314 RFPL1O75677 317 aa5.05□□□□□ -1.6
DHFR-207ENST00000513314 CCKARP32238 428 aa5.05□□□□□ -1.6
DHFR-207ENST00000513314 RAB27AP51159 221 aa5.05□□□□□ -1.6
DHFR-207ENST00000513314 ANAPC15P60006 121 aa5.05□□□□□ -1.6
DHFR-207ENST00000513314 EPM2AIP1Q7L775 607 aaPredicted RBP5.05□□□□□ -1.6
DHFR-207ENST00000513314 OVCH2Q7RTZ1 564 aa5.05□□□□□ -1.6
DHFR-207ENST00000513314 MICU3Q86XE3 530 aa5.05□□□□□ -1.6
DHFR-207ENST00000513314 COL23A1Q86Y22 540 aaPredicted RBP5.05□□□□□ -1.6
DHFR-207ENST00000513314 C16orf71Q8IYS4 520 aaPredicted RBP5.05□□□□□ -1.6
DHFR-207ENST00000513314 CHPFQ8IZ52 775 aa5.05□□□□□ -1.6
DHFR-207ENST00000513314 ZBTB45Q96K62 511 aaPredicted RBP5.05□□□□□ -1.6
DHFR-207ENST00000513314 FOXP1Q9H334 677 aaPredicted RBP5.05□□□□□ -1.6
DHFR-207ENST00000513314 USP19O94966 1318 aa5.04□□□□□ -1.6
DHFR-207ENST00000513314 ANKRD62A6NC57 917 aa5.04□□□□□ -1.6
DHFR-207ENST00000513314 TRIM43BA6NCK2 446 aa5.04□□□□□ -1.6
DHFR-207ENST00000513314 PYCARD-AS1I3L0S3 204 aa5.04□□□□□ -1.6
DHFR-207ENST00000513314 TLR2O60603 784 aa5.04□□□□□ -1.6
DHFR-207ENST00000513314 CTNND1O60716 968 aaKnown RBP5.04□□□□□ -1.6
DHFR-207ENST00000513314 RASSF9O75901 435 aa5.04□□□□□ -1.6
DHFR-207ENST00000513314 PDGFRBP09619 1106 aa5.04□□□□□ -1.6
DHFR-207ENST00000513314 MYBP10242 640 aa5.04□□□□□ -1.6
DHFR-207ENST00000513314 KLRC1P26715 233 aa5.04□□□□□ -1.6
DHFR-207ENST00000513314 GATMP50440 423 aa5.04□□□□□ -1.6
DHFR-207ENST00000513314 SUMO3P55854 103 aaPredicted RBP5.04□□□□□ -1.6
DHFR-207ENST00000513314 CFHR3Q02985 330 aa5.04□□□□□ -1.6
DHFR-207ENST00000513314 SRSF1Q07955 248 aaKnown RBP eCLIP5.04□□□□□ -1.6
DHFR-207ENST00000513314 KCNB1Q14721 858 aa5.04□□□□□ -1.6
DHFR-207ENST00000513314 SEC23BQ15437 767 aa5.04□□□□□ -1.6
DHFR-207ENST00000513314 KCTD20Q7Z5Y7 419 aa5.04□□□□□ -1.6
DHFR-207ENST00000513314 FAM177A1Q8N128 213 aaPredicted RBP5.04□□□□□ -1.6
DHFR-207ENST00000513314 TRIM43Q96BQ3 446 aaPredicted RBP5.04□□□□□ -1.6
DHFR-207ENST00000513314 CDH19Q9H159 772 aa5.04□□□□□ -1.6
DHFR-207ENST00000513314 SACM1LQ9NTJ5 587 aa5.04□□□□□ -1.6
DHFR-207ENST00000513314 POT1Q9NUX5 634 aa5.04□□□□□ -1.6
DHFR-207ENST00000513314 TMEM184CQ9NVA4 438 aa5.04□□□□□ -1.6
DHFR-207ENST00000513314 hCG_2014768A0A024R1R8 64 aa5.03□□□□□ -1.6
DHFR-207ENST00000513314 H7C4K7 107 aa5.03□□□□□ -1.6
DHFR-207ENST00000513314 EXOC5O00471 708 aa5.03□□□□□ -1.6
DHFR-207ENST00000513314 RRP9O43818 475 aaKnown RBP5.03□□□□□ -1.6
DHFR-207ENST00000513314 OAZ2O95190 189 aa5.03□□□□□ -1.6
DHFR-207ENST00000513314 HGFP14210 728 aa5.03□□□□□ -1.6
DHFR-207ENST00000513314 CD19P15391 556 aa5.03□□□□□ -1.6
DHFR-207ENST00000513314 ATF7P17544 494 aaPredicted RBP5.03□□□□□ -1.6
DHFR-207ENST00000513314 PTDSS1P48651 473 aaKnown RBP5.03□□□□□ -1.6
DHFR-207ENST00000513314 PGDP52209 483 aa5.03□□□□□ -1.6
DHFR-207ENST00000513314 RPS13P62277 151 aaKnown RBP5.03□□□□□ -1.6
DHFR-207ENST00000513314 CFHR1Q03591 330 aa5.03□□□□□ -1.6
DHFR-207ENST00000513314 ARHGEF7Q14155 803 aa5.03□□□□□ -1.6
DHFR-207ENST00000513314 NPY5RQ15761 445 aa5.03□□□□□ -1.6
DHFR-207ENST00000513314 GPR162Q16538 588 aa5.03□□□□□ -1.6
DHFR-207ENST00000513314 CC2D1BQ5T0F9 858 aaKnown RBP5.03□□□□□ -1.6
DHFR-207ENST00000513314 PIP4P1Q86T03 277 aa5.03□□□□□ -1.6
DHFR-207ENST00000513314 ANKRD13BQ86YJ7 626 aa5.03□□□□□ -1.6
DHFR-207ENST00000513314 NMD3Q96D46 503 aaKnown RBP5.03□□□□□ -1.6
DHFR-207ENST00000513314 WDYHV1Q96HA8 205 aa5.03□□□□□ -1.6
DHFR-207ENST00000513314 ADGRE3Q9BY15 652 aa5.03□□□□□ -1.6
DHFR-207ENST00000513314 TMEM60Q9H2L4 133 aa5.03□□□□□ -1.6
DHFR-207ENST00000513314 DHX36Q9H2U1 1008 aaKnown RBP5.03□□□□□ -1.6
DHFR-207ENST00000513314 DDX56Q9NY93 547 aaKnown RBP5.03□□□□□ -1.6
DHFR-207ENST00000513314 CPNE7Q9UBL6 633 aa5.03□□□□□ -1.6
DHFR-207ENST00000513314 NKX1-2Q9UD57 310 aaPredicted RBP5.03□□□□□ -1.6
DHFR-207ENST00000513314 IGKV2D-30A0A075B6S6 120 aa5.02□□□□□ -1.61
DHFR-207ENST00000513314 CD8B2A6NJW9 211 aa5.02□□□□□ -1.61
DHFR-207ENST00000513314 ISM1B1AKI9 464 aa5.02□□□□□ -1.61
DHFR-207ENST00000513314 CLIC1O00299 241 aa5.02□□□□□ -1.61
DHFR-207ENST00000513314 CNOT3O75175 753 aaKnown RBP5.02□□□□□ -1.61
DHFR-207ENST00000513314 PIAS2O75928 621 aa5.02□□□□□ -1.61
DHFR-207ENST00000513314 CTSAP10619 480 aa5.02□□□□□ -1.61
DHFR-207ENST00000513314 CYP19A1P11511 503 aaPredicted RBP5.02□□□□□ -1.61
DHFR-207ENST00000513314 THBS4P35443 961 aa5.02□□□□□ -1.61
DHFR-207ENST00000513314 ME1P48163 572 aa5.02□□□□□ -1.61
DHFR-207ENST00000513314 ITGA8P53708 1063 aa5.02□□□□□ -1.61
DHFR-207ENST00000513314 EPHB1P54762 984 aa5.02□□□□□ -1.61
DHFR-207ENST00000513314 ZNF750Q32MQ0 723 aa5.02□□□□□ -1.61
DHFR-207ENST00000513314 LEXMQ3ZCV2 418 aa5.02□□□□□ -1.61
DHFR-207ENST00000513314 C12orf76Q8N812 135 aaPredicted RBP5.02□□□□□ -1.61
DHFR-207ENST00000513314 SMCR8Q8TEV9 937 aaPredicted RBP5.02□□□□□ -1.61
DHFR-207ENST00000513314 STK31Q9BXU1 1019 aa5.02□□□□□ -1.61
DHFR-207ENST00000513314 C22orf23Q9BZE7 217 aa5.02□□□□□ -1.61
DHFR-207ENST00000513314 STK32BQ9NY57 414 aa5.02□□□□□ -1.61
DHFR-207ENST00000513314 HEY2Q9UBP5 337 aa5.02□□□□□ -1.61
DHFR-207ENST00000513314 HDAC9Q9UKV0 1011 aa5.02□□□□□ -1.61
DHFR-207ENST00000513314 TPCN1Q9ULQ1 816 aa5.02□□□□□ -1.61
DHFR-207ENST00000513314 CFAP69A5D8W1 941 aa5.01□□□□□ -1.61
DHFR-207ENST00000513314 A8MVJ9 347 aa5.01□□□□□ -1.61
DHFR-207ENST00000513314 FAM227AF5H4B4 570 aa5.01□□□□□ -1.61
DHFR-207ENST00000513314 U2AF1L5P0DN76 240 aaPredicted RBP5.01□□□□□ -1.61
DHFR-207ENST00000513314 BRAFP15056 766 aa5.01□□□□□ -1.61
DHFR-207ENST00000513314 MCM5P33992 734 aa5.01□□□□□ -1.61
DHFR-207ENST00000513314 HSF1Q00613 529 aa5.01□□□□□ -1.61
DHFR-207ENST00000513314 U2AF1Q01081 240 aaKnown RBP eCLIP5.01□□□□□ -1.61
DHFR-207ENST00000513314 SLC29A2Q14542 456 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms