RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 ZNF804BA4D1E1 1349 aa4.13□□□□□ -1.75
HMGB1P29-201ENST00000505659 GCATO75600 419 aa4.12□□□□□ -1.75
HMGB1P29-201ENST00000505659 MT-ND5P03915 603 aa4.12□□□□□ -1.75
HMGB1P29-201ENST00000505659 MYCLP12524 364 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P29-201ENST00000505659 CREB1P16220 341 aa4.12□□□□□ -1.75
HMGB1P29-201ENST00000505659 BTF3P20290 206 aaKnown RBP4.12□□□□□ -1.75
HMGB1P29-201ENST00000505659 GATMP50440 423 aa4.12□□□□□ -1.75
HMGB1P29-201ENST00000505659 DEUP1Q05D60 604 aa4.12□□□□□ -1.75
HMGB1P29-201ENST00000505659 FAM187BQ17R55 369 aa4.12□□□□□ -1.75
HMGB1P29-201ENST00000505659 RRAGBQ5VZM2 374 aa4.12□□□□□ -1.75
HMGB1P29-201ENST00000505659 PLAG1Q6DJT9 500 aa4.12□□□□□ -1.75
HMGB1P29-201ENST00000505659 USP49Q70CQ1 688 aa4.12□□□□□ -1.75
HMGB1P29-201ENST00000505659 SFTPA1Q8IWL2 248 aa4.12□□□□□ -1.75
HMGB1P29-201ENST00000505659 YAF2Q8IY57 180 aa4.12□□□□□ -1.75
HMGB1P29-201ENST00000505659 GALNT16Q8N428 558 aa4.12□□□□□ -1.75
HMGB1P29-201ENST00000505659 MAFAQ8NHW3 353 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P29-201ENST00000505659 SCARB1Q8WTV0 552 aa4.12□□□□□ -1.75
HMGB1P29-201ENST00000505659 MSLNLQ96KJ4 702 aa4.12□□□□□ -1.75
HMGB1P29-201ENST00000505659 EFHD1Q9BUP0 239 aa4.12□□□□□ -1.75
HMGB1P29-201ENST00000505659 KRTAP9-8Q9BYQ0 159 aa4.12□□□□□ -1.75
HMGB1P29-201ENST00000505659 SEMA4CQ9C0C4 833 aa4.12□□□□□ -1.75
HMGB1P29-201ENST00000505659 DHX36Q9H2U1 1008 aaKnown RBP4.12□□□□□ -1.75
HMGB1P29-201ENST00000505659 PRDM11Q9NQV5 511 aa4.12□□□□□ -1.75
HMGB1P29-201ENST00000505659 ZNF212Q9UDV6 495 aa4.12□□□□□ -1.75
HMGB1P29-201ENST00000505659 BTBD3Q9Y2F9 522 aa4.12□□□□□ -1.75
HMGB1P29-201ENST00000505659 PPM1GO15355 546 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P29-201ENST00000505659 USP1O94782 785 aa4.11□□□□□ -1.75
HMGB1P29-201ENST00000505659 IL1R2P27930 398 aa4.11□□□□□ -1.75
HMGB1P29-201ENST00000505659 KRTAP10-11P60412 298 aa4.11□□□□□ -1.75
HMGB1P29-201ENST00000505659 SEC23BQ15437 767 aa4.11□□□□□ -1.75
HMGB1P29-201ENST00000505659 CERKLQ49MI3 558 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P29-201ENST00000505659 MANEALQ5VSG8 457 aa4.11□□□□□ -1.75
HMGB1P29-201ENST00000505659 KLHDC7AQ5VTJ3 777 aa4.11□□□□□ -1.75
HMGB1P29-201ENST00000505659 MORN5Q5VZ52 161 aa4.11□□□□□ -1.75
HMGB1P29-201ENST00000505659 MIS18BP1Q6P0N0 1132 aa4.11□□□□□ -1.75
HMGB1P29-201ENST00000505659 CLEC9AQ6UXN8 241 aa4.11□□□□□ -1.75
HMGB1P29-201ENST00000505659 LIX1LQ8IVB5 337 aa4.11□□□□□ -1.75
HMGB1P29-201ENST00000505659 LINC01465Q8N7H1 131 aa4.11□□□□□ -1.75
HMGB1P29-201ENST00000505659 ZC3H10Q96K80 434 aaKnown RBP4.11□□□□□ -1.75
HMGB1P29-201ENST00000505659 SPRTNQ9H040 489 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P29-201ENST00000505659 NRIP3Q9NQ35 241 aa4.11□□□□□ -1.75
HMGB1P29-201ENST00000505659 VPS51Q9UID3 782 aa4.11□□□□□ -1.75
HMGB1P29-201ENST00000505659 SNX13Q9Y5W8 968 aa4.11□□□□□ -1.75
HMGB1P29-201ENST00000505659 WDR17Q8IZU2 1322 aa4.11□□□□□ -1.75
HMGB1P29-201ENST00000505659 A0A087WZ62 844 aa4.1□□□□□ -1.75
HMGB1P29-201ENST00000505659 UBE2Q2LH0YL09 131 aa4.1□□□□□ -1.75
HMGB1P29-201ENST00000505659 PQBP1O60828 265 aaKnown RBP4.1□□□□□ -1.75
HMGB1P29-201ENST00000505659 BCAR3O75815 825 aa4.1□□□□□ -1.75
HMGB1P29-201ENST00000505659 PARNO95453 639 aaKnown RBP4.1□□□□□ -1.75
HMGB1P29-201ENST00000505659 TOP3BO95985 862 aaKnown RBP4.1□□□□□ -1.75
HMGB1P29-201ENST00000505659 MT-CO3P00414 261 aa4.1□□□□□ -1.75
HMGB1P29-201ENST00000505659 A1BGP04217 495 aa4.1□□□□□ -1.75
HMGB1P29-201ENST00000505659 CHRM5P08912 532 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P29-201ENST00000505659 HTR7P34969 479 aa4.1□□□□□ -1.75
HMGB1P29-201ENST00000505659 PIK3CBP42338 1070 aa4.1□□□□□ -1.75
HMGB1P29-201ENST00000505659 FHL3Q13643 280 aa4.1□□□□□ -1.75
HMGB1P29-201ENST00000505659 DAZAP2Q15038 168 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P29-201ENST00000505659 Q4G0T1 1027 aa4.1□□□□□ -1.75
HMGB1P29-201ENST00000505659 C11orf87Q6NUJ2 197 aa4.1□□□□□ -1.75
HMGB1P29-201ENST00000505659 DGKHQ86XP1 1220 aa4.1□□□□□ -1.75
HMGB1P29-201ENST00000505659 RAB11FIP4Q86YS3 637 aa4.1□□□□□ -1.75
HMGB1P29-201ENST00000505659 PNISRQ8TF01 805 aaKnown RBP4.1□□□□□ -1.75
HMGB1P29-201ENST00000505659 RPL36ALQ969Q0 106 aaKnown RBP4.1□□□□□ -1.75
HMGB1P29-201ENST00000505659 HIST1H2AAQ96QV6 131 aa4.1□□□□□ -1.75
HMGB1P29-201ENST00000505659 PRSS22Q9GZN4 317 aa4.1□□□□□ -1.75
HMGB1P29-201ENST00000505659 BTBD1Q9H0C5 482 aa4.1□□□□□ -1.75
HMGB1P29-201ENST00000505659 GJB4Q9NTQ9 266 aa4.1□□□□□ -1.75
HMGB1P29-201ENST00000505659 TFCP2L1Q9NZI6 479 aa4.1□□□□□ -1.75
HMGB1P29-201ENST00000505659 MGAT4CQ9UBM8 478 aa4.1□□□□□ -1.75
HMGB1P29-201ENST00000505659 SCAF8Q9UPN6 1271 aaKnown RBP4.1□□□□□ -1.75
HMGB1P29-201ENST00000505659 FAM50BQ9Y247 325 aa4.1□□□□□ -1.75
HMGB1P29-201ENST00000505659 HPSEQ9Y251 543 aa4.1□□□□□ -1.75
HMGB1P29-201ENST00000505659 SLC27A6Q9Y2P4 619 aa4.1□□□□□ -1.75
HMGB1P29-201ENST00000505659 AQP7P3A6NL99 342 aa4.09□□□□□ -1.75
HMGB1P29-201ENST00000505659 M0R3H8 397 aa4.09□□□□□ -1.75
HMGB1P29-201ENST00000505659 ADAM10O14672 748 aa4.09□□□□□ -1.75
HMGB1P29-201ENST00000505659 KPNA5O15131 536 aa4.09□□□□□ -1.75
HMGB1P29-201ENST00000505659 CA12O43570 354 aa4.09□□□□□ -1.75
HMGB1P29-201ENST00000505659 ATF7P17544 494 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P29-201ENST00000505659 COPAP53621 1224 aa4.09□□□□□ -1.75
HMGB1P29-201ENST00000505659 ZNF268Q14587 947 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P29-201ENST00000505659 LARS2Q15031 903 aaKnown RBP4.09□□□□□ -1.75
HMGB1P29-201ENST00000505659 GRHL2Q6ISB3 625 aa4.09□□□□□ -1.75
HMGB1P29-201ENST00000505659 TMEM65Q6PI78 240 aa4.09□□□□□ -1.75
HMGB1P29-201ENST00000505659 DCDC5Q6ZRR9 648 aa4.09□□□□□ -1.75
HMGB1P29-201ENST00000505659 KRT78Q8N1N4 520 aa4.09□□□□□ -1.75
HMGB1P29-201ENST00000505659 ADAMTS18Q8TE60 1221 aa4.09□□□□□ -1.75
HMGB1P29-201ENST00000505659 PHKBQ93100 1093 aa4.09□□□□□ -1.75
HMGB1P29-201ENST00000505659 PRR11Q96HE9 360 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P29-201ENST00000505659 CCDC17Q96LX7 622 aa4.09□□□□□ -1.75
HMGB1P29-201ENST00000505659 FYTTD1Q96QD9 318 aaKnown RBP4.09□□□□□ -1.75
HMGB1P29-201ENST00000505659 SELENOOQ9BVL4 669 aa4.09□□□□□ -1.75
HMGB1P29-201ENST00000505659 BRIP1Q9BX63 1249 aa4.09□□□□□ -1.75
HMGB1P29-201ENST00000505659 NUP62CLQ9H1M0 184 aa4.09□□□□□ -1.75
HMGB1P29-201ENST00000505659 FAM83DQ9H4H8 585 aa4.09□□□□□ -1.75
HMGB1P29-201ENST00000505659 DDX21Q9NR30 783 aaKnown RBP eCLIP4.09□□□□□ -1.75
HMGB1P29-201ENST00000505659 SNX15Q9NRS6 342 aa4.09□□□□□ -1.75
HMGB1P29-201ENST00000505659 DNAJB11Q9UBS4 358 aa4.09□□□□□ -1.75
HMGB1P29-201ENST00000505659 RHPN2P1A8MT19 583 aa4.08□□□□□ -1.76
HMGB1P29-201ENST00000505659 TMEM232C9JQI7 657 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms