RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 CYLDQ9NQC7 956 aa14.24□□□□□ -0.13
COL1A1-208ENST00000494334 CNGB3Q9NQW8 809 aa14.24□□□□□ -0.13
COL1A1-208ENST00000494334 ST7Q9NRC1 585 aa14.24□□□□□ -0.13
COL1A1-208ENST00000494334 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.24□□□□□ -0.13
COL1A1-208ENST00000494334 IFNKQ9P0W0 207 aa14.24□□□□□ -0.13
COL1A1-208ENST00000494334 NAGPAQ9UK23 515 aa14.24□□□□□ -0.13
COL1A1-208ENST00000494334 ZNF263O14978 683 aa14.23□□□□□ -0.13
COL1A1-208ENST00000494334 CHADO15335 359 aa14.23□□□□□ -0.13
COL1A1-208ENST00000494334 TBX18O95935 607 aa14.23□□□□□ -0.13
COL1A1-208ENST00000494334 MBL2P11226 248 aaPredicted RBP14.23□□□□□ -0.13
COL1A1-208ENST00000494334 RARGP13631 454 aa14.23□□□□□ -0.13
COL1A1-208ENST00000494334 TCF3P15923 654 aa14.23□□□□□ -0.13
COL1A1-208ENST00000494334 GDI1P31150 447 aa14.23□□□□□ -0.13
COL1A1-208ENST00000494334 DAOAP59103 153 aa14.23□□□□□ -0.13
COL1A1-208ENST00000494334 ZNF77Q15935 545 aa14.23□□□□□ -0.13
COL1A1-208ENST00000494334 IER5LQ5T953 404 aa14.23□□□□□ -0.13
COL1A1-208ENST00000494334 TAF3Q5VWG9 929 aa14.23□□□□□ -0.13
COL1A1-208ENST00000494334 CACNA2D4Q7Z3S7 1137 aa14.23□□□□□ -0.13
COL1A1-208ENST00000494334 TMEM110Q86TL2 294 aa14.23□□□□□ -0.13
COL1A1-208ENST00000494334 PASD1Q8IV76 773 aa14.23□□□□□ -0.13
COL1A1-208ENST00000494334 YAF2Q8IY57 180 aa14.23□□□□□ -0.13
COL1A1-208ENST00000494334 ARHGAP18Q8N392 663 aa14.23□□□□□ -0.13
COL1A1-208ENST00000494334 ZNF276Q8N554 614 aa14.23□□□□□ -0.13
COL1A1-208ENST00000494334 EPS8L1Q8TE68 723 aa14.23□□□□□ -0.13
COL1A1-208ENST00000494334 SH3RF2Q8TEC5 729 aa14.23□□□□□ -0.13
COL1A1-208ENST00000494334 BAP1Q92560 729 aa14.23□□□□□ -0.13
COL1A1-208ENST00000494334 ASIC4Q96FT7 647 aa14.23□□□□□ -0.13
COL1A1-208ENST00000494334 BRD9Q9H8M2 597 aa14.23□□□□□ -0.13
COL1A1-208ENST00000494334 SMPD4Q9NXE4 827 aa14.23□□□□□ -0.13
COL1A1-208ENST00000494334 CLIC5Q9NZA1 410 aa14.23□□□□□ -0.13
COL1A1-208ENST00000494334 WNT16Q9UBV4 365 aa14.23□□□□□ -0.13
COL1A1-208ENST00000494334 NUDT5Q9UKK9 219 aa14.23□□□□□ -0.13
COL1A1-208ENST00000494334 CPQQ9Y646 472 aa14.23□□□□□ -0.13
COL1A1-208ENST00000494334 MYH10P35580 1976 aa14.23□□□□□ -0.13
COL1A1-208ENST00000494334 ZNF638Q14966 1978 aaKnown RBP14.23□□□□□ -0.13
COL1A1-208ENST00000494334 OBSL1O75147 1896 aa14.23□□□□□ -0.13
COL1A1-208ENST00000494334 DENND4CQ5VZ89 1909 aa14.22□□□□□ -0.13
COL1A1-208ENST00000494334 YJEFN3A6XGL0 299 aa14.22□□□□□ -0.13
COL1A1-208ENST00000494334 E7ENQ6 273 aa14.22□□□□□ -0.13
COL1A1-208ENST00000494334 LEFTY2O00292 366 aa14.22□□□□□ -0.13
COL1A1-208ENST00000494334 ARNTLO00327 626 aa14.22□□□□□ -0.13
COL1A1-208ENST00000494334 RALAP11233 206 aa14.22□□□□□ -0.13
COL1A1-208ENST00000494334 ATP5C1P36542 298 aaKnown RBP14.22□□□□□ -0.13
COL1A1-208ENST00000494334 ACADSBP45954 432 aa14.22□□□□□ -0.13
COL1A1-208ENST00000494334 YWHAGP61981 247 aaKnown RBP eCLIP14.22□□□□□ -0.13
COL1A1-208ENST00000494334 USP4Q13107 963 aa14.22□□□□□ -0.13
COL1A1-208ENST00000494334 PDCLQ13371 301 aa14.22□□□□□ -0.13
COL1A1-208ENST00000494334 KLHDC10Q6PID8 442 aa14.22□□□□□ -0.13
COL1A1-208ENST00000494334 SCUBE3Q8IX30 993 aa14.22□□□□□ -0.13
COL1A1-208ENST00000494334 C1orf131Q8NDD1 294 aaKnown RBP14.22□□□□□ -0.13
COL1A1-208ENST00000494334 TTC16Q8NEE8 873 aa14.22□□□□□ -0.13
COL1A1-208ENST00000494334 CLEC4CQ8WTT0 213 aa14.22□□□□□ -0.13
COL1A1-208ENST00000494334 IRF7Q92985 503 aa14.22□□□□□ -0.13
COL1A1-208ENST00000494334 ZFYVE19Q96K21 471 aa14.22□□□□□ -0.13
COL1A1-208ENST00000494334 ZFRQ96KR1 1074 aaKnown RBP14.22□□□□□ -0.13
COL1A1-208ENST00000494334 XPO4Q9C0E2 1151 aaKnown RBP14.22□□□□□ -0.13
COL1A1-208ENST00000494334 TTYH3Q9C0H2 523 aa14.22□□□□□ -0.13
COL1A1-208ENST00000494334 MIS12Q9H081 205 aa14.22□□□□□ -0.13
COL1A1-208ENST00000494334 PDCL3Q9H2J4 239 aa14.22□□□□□ -0.13
COL1A1-208ENST00000494334 C11orf16Q9NQ32 467 aa14.22□□□□□ -0.13
COL1A1-208ENST00000494334 TJP2Q9UDY2 1190 aa14.22□□□□□ -0.13
COL1A1-208ENST00000494334 NOCTQ9UK39 431 aaKnown RBP14.22□□□□□ -0.13
COL1A1-208ENST00000494334 FBXL21Q9UKT6 434 aa14.22□□□□□ -0.13
COL1A1-208ENST00000494334 PATJQ8NI35 1801 aa14.22□□□□□ -0.13
COL1A1-208ENST00000494334 ANAPC1Q9H1A4 1944 aa14.21□□□□□ -0.13
COL1A1-208ENST00000494334 TMEM221A6NGB7 291 aa14.21□□□□□ -0.13
COL1A1-208ENST00000494334 E5RJQ4 531 aa14.21□□□□□ -0.13
COL1A1-208ENST00000494334 M0R296 226 aa14.21□□□□□ -0.13
COL1A1-208ENST00000494334 MDM4O15151 490 aa14.21□□□□□ -0.13
COL1A1-208ENST00000494334 PAPSS1O43252 624 aaPredicted RBP14.21□□□□□ -0.13
COL1A1-208ENST00000494334 FBXO21O94952 628 aa14.21□□□□□ -0.13
COL1A1-208ENST00000494334 MMEP08473 750 aa14.21□□□□□ -0.13
COL1A1-208ENST00000494334 CHRNB2P17787 502 aa14.21□□□□□ -0.13
COL1A1-208ENST00000494334 CDH5P33151 784 aaPredicted RBP14.21□□□□□ -0.13
COL1A1-208ENST00000494334 PFKPQ01813 784 aa14.21□□□□□ -0.13
COL1A1-208ENST00000494334 CDR2Q01850 454 aa14.21□□□□□ -0.13
COL1A1-208ENST00000494334 MTF1Q14872 753 aa14.21□□□□□ -0.13
COL1A1-208ENST00000494334 ARHGAP29Q52LW3 1261 aa14.21□□□□□ -0.13
COL1A1-208ENST00000494334 SLC44A4Q53GD3 710 aa14.21□□□□□ -0.13
COL1A1-208ENST00000494334 FIGNQ5HY92 759 aa14.21□□□□□ -0.13
COL1A1-208ENST00000494334 BSPRYQ5W0U4 402 aa14.21□□□□□ -0.13
COL1A1-208ENST00000494334 BTBD8Q5XKL5 378 aa14.21□□□□□ -0.13
COL1A1-208ENST00000494334 HFE2Q6ZVN8 426 aa14.21□□□□□ -0.13
COL1A1-208ENST00000494334 GAS2L3Q86XJ1 694 aa14.21□□□□□ -0.13
COL1A1-208ENST00000494334 ZNF677Q86XU0 584 aa14.21□□□□□ -0.13
COL1A1-208ENST00000494334 SLC20A1Q8WUM9 679 aa14.21□□□□□ -0.13
COL1A1-208ENST00000494334 IRGQQ8WZA9 623 aa14.21□□□□□ -0.13
COL1A1-208ENST00000494334 DNASE1L2Q92874 299 aa14.21□□□□□ -0.13
COL1A1-208ENST00000494334 PPP1R13BQ96KQ4 1090 aa14.21□□□□□ -0.13
COL1A1-208ENST00000494334 CPXM1Q96SM3 734 aa14.21□□□□□ -0.13
COL1A1-208ENST00000494334 FAM83CQ9BQN1 747 aa14.21□□□□□ -0.13
COL1A1-208ENST00000494334 KLF16Q9BXK1 252 aaPredicted RBP14.21□□□□□ -0.13
COL1A1-208ENST00000494334 EDEM3Q9BZQ6 932 aa14.21□□□□□ -0.13
COL1A1-208ENST00000494334 NACA2Q9H009 215 aa14.21□□□□□ -0.13
COL1A1-208ENST00000494334 TRPV5Q9NQA5 729 aa14.21□□□□□ -0.13
COL1A1-208ENST00000494334 GKN1Q9NS71 199 aa14.21□□□□□ -0.13
COL1A1-208ENST00000494334 THG1LQ9NWX6 298 aaKnown RBP14.21□□□□□ -0.13
COL1A1-208ENST00000494334 CA14Q9ULX7 337 aa14.21□□□□□ -0.13
COL1A1-208ENST00000494334 MYO6Q9UM54 1294 aa14.21□□□□□ -0.13
COL1A1-208ENST00000494334 KRBA1A5PL33 1030 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms