RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 ZNF77Q15935 545 aa11.65□□□□□ -0.54
CPSF7-212ENST00000489728 C1orf228Q6PIY5 440 aa11.65□□□□□ -0.54
CPSF7-212ENST00000489728 BEND5Q7L4P6 421 aa11.65□□□□□ -0.54
CPSF7-212ENST00000489728 SLC47A2Q86VL8 602 aa11.65□□□□□ -0.54
CPSF7-212ENST00000489728 ARL14EPQ8N8R7 260 aaPredicted RBP11.65□□□□□ -0.54
CPSF7-212ENST00000489728 UBA3Q8TBC4 463 aa11.65□□□□□ -0.54
CPSF7-212ENST00000489728 ASIC4Q96FT7 647 aa11.65□□□□□ -0.54
CPSF7-212ENST00000489728 RPP25Q9BUL9 199 aaKnown RBP11.65□□□□□ -0.54
CPSF7-212ENST00000489728 OLA1Q9NTK5 396 aaKnown RBP11.65□□□□□ -0.54
CPSF7-212ENST00000489728 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.65□□□□□ -0.54
CPSF7-212ENST00000489728 COL4A2P08572 1712 aa11.64□□□□□ -0.55
CPSF7-212ENST00000489728 PRR33A8MZF0 331 aa11.64□□□□□ -0.55
CPSF7-212ENST00000489728 TULP2O00295 520 aa11.64□□□□□ -0.55
CPSF7-212ENST00000489728 ARNTLO00327 626 aa11.64□□□□□ -0.55
CPSF7-212ENST00000489728 EPHB6O15197 1021 aa11.64□□□□□ -0.55
CPSF7-212ENST00000489728 COCHO43405 550 aa11.64□□□□□ -0.55
CPSF7-212ENST00000489728 CDH5P33151 784 aaPredicted RBP11.64□□□□□ -0.55
CPSF7-212ENST00000489728 ATP5C1P36542 298 aaKnown RBP11.64□□□□□ -0.55
CPSF7-212ENST00000489728 KLK7P49862 253 aa11.64□□□□□ -0.55
CPSF7-212ENST00000489728 UBASH3AP57075 661 aa11.64□□□□□ -0.55
CPSF7-212ENST00000489728 YWHAGP61981 247 aaKnown RBP eCLIP11.64□□□□□ -0.55
CPSF7-212ENST00000489728 GPC5P78333 572 aa11.64□□□□□ -0.55
CPSF7-212ENST00000489728 PRKCQQ04759 706 aa11.64□□□□□ -0.55
CPSF7-212ENST00000489728 GOLGA8FQ08AF8 430 aa11.64□□□□□ -0.55
CPSF7-212ENST00000489728 GOLGA8DPQ0D2H9 430 aa11.64□□□□□ -0.55
CPSF7-212ENST00000489728 ADIGQ0VDE8 80 aa11.64□□□□□ -0.55
CPSF7-212ENST00000489728 PDGFRLQ15198 375 aa11.64□□□□□ -0.55
CPSF7-212ENST00000489728 PMF1Q6P1K2 205 aa11.64□□□□□ -0.55
CPSF7-212ENST00000489728 DENND1BQ6P3S1 775 aa11.64□□□□□ -0.55
CPSF7-212ENST00000489728 CACNA2D4Q7Z3S7 1137 aa11.64□□□□□ -0.55
CPSF7-212ENST00000489728 TMEM110Q86TL2 294 aa11.64□□□□□ -0.55
CPSF7-212ENST00000489728 EPS8L1Q8TE68 723 aa11.64□□□□□ -0.55
CPSF7-212ENST00000489728 RSPRY1Q96DX4 576 aa11.64□□□□□ -0.55
CPSF7-212ENST00000489728 SHDQ96IW2 340 aa11.64□□□□□ -0.55
CPSF7-212ENST00000489728 SLC22A12Q96S37 553 aa11.64□□□□□ -0.55
CPSF7-212ENST00000489728 ANP32EQ9BTT0 268 aa11.64□□□□□ -0.55
CPSF7-212ENST00000489728 NUP58Q9BVL2 599 aa11.64□□□□□ -0.55
CPSF7-212ENST00000489728 SLC4A5Q9BY07 1137 aa11.64□□□□□ -0.55
CPSF7-212ENST00000489728 PLA2G2FQ9BZM2 168 aa11.64□□□□□ -0.55
CPSF7-212ENST00000489728 ULBP1Q9BZM6 244 aa11.64□□□□□ -0.55
CPSF7-212ENST00000489728 NACA2Q9H009 215 aa11.64□□□□□ -0.55
CPSF7-212ENST00000489728 MIS12Q9H081 205 aa11.64□□□□□ -0.55
CPSF7-212ENST00000489728 BRD9Q9H8M2 597 aa11.64□□□□□ -0.55
CPSF7-212ENST00000489728 CHORDC1Q9UHD1 332 aaPredicted RBP11.64□□□□□ -0.55
CPSF7-212ENST00000489728 NAGPAQ9UK23 515 aa11.64□□□□□ -0.55
CPSF7-212ENST00000489728 TRIOO75962 3097 aa11.64□□□□□ -0.55
CPSF7-212ENST00000489728 A0A1W2PQH9 124 aa11.63□□□□□ -0.55
CPSF7-212ENST00000489728 E2F8A0AVK6 867 aa11.63□□□□□ -0.55
CPSF7-212ENST00000489728 TMEM221A6NGB7 291 aa11.63□□□□□ -0.55
CPSF7-212ENST00000489728 M0R296 226 aa11.63□□□□□ -0.55
CPSF7-212ENST00000489728 SLC9A3R1O14745 358 aaPredicted RBP11.63□□□□□ -0.55
CPSF7-212ENST00000489728 TEX33O43247 280 aa11.63□□□□□ -0.55
CPSF7-212ENST00000489728 CBFA2T2O43439 604 aa11.63□□□□□ -0.55
CPSF7-212ENST00000489728 NARSO43776 548 aaKnown RBP11.63□□□□□ -0.55
CPSF7-212ENST00000489728 ABL1P00519 1130 aa11.63□□□□□ -0.55
CPSF7-212ENST00000489728 FERP16591 822 aa11.63□□□□□ -0.55
CPSF7-212ENST00000489728 GDI1P31150 447 aa11.63□□□□□ -0.55
CPSF7-212ENST00000489728 PBX1P40424 430 aa11.63□□□□□ -0.55
CPSF7-212ENST00000489728 DAOAP59103 153 aa11.63□□□□□ -0.55
CPSF7-212ENST00000489728 PDCLQ13371 301 aa11.63□□□□□ -0.55
CPSF7-212ENST00000489728 GRM2Q14416 872 aa11.63□□□□□ -0.55
CPSF7-212ENST00000489728 MTF1Q14872 753 aa11.63□□□□□ -0.55
CPSF7-212ENST00000489728 CC2D1AQ6P1N0 951 aaPredicted RBP11.63□□□□□ -0.55
CPSF7-212ENST00000489728 TRIM72Q6ZMU5 477 aa11.63□□□□□ -0.55
CPSF7-212ENST00000489728 BHLHA9Q7RTU4 235 aa11.63□□□□□ -0.55
CPSF7-212ENST00000489728 SCD5Q86SK9 330 aa11.63□□□□□ -0.55
CPSF7-212ENST00000489728 ZDHHC17Q8IUH5 632 aa11.63□□□□□ -0.55
CPSF7-212ENST00000489728 TMEM35BQ8NCS4 154 aa11.63□□□□□ -0.55
CPSF7-212ENST00000489728 MSANTD4Q8NCY6 345 aa11.63□□□□□ -0.55
CPSF7-212ENST00000489728 SH3RF2Q8TEC5 729 aa11.63□□□□□ -0.55
CPSF7-212ENST00000489728 DDX1Q92499 740 aaKnown RBP11.63□□□□□ -0.55
CPSF7-212ENST00000489728 GOLGA1Q92805 767 aa11.63□□□□□ -0.55
CPSF7-212ENST00000489728 OTUB2Q96DC9 234 aa11.63□□□□□ -0.55
CPSF7-212ENST00000489728 NAP1L5Q96NT1 182 aaPredicted RBP11.63□□□□□ -0.55
CPSF7-212ENST00000489728 CYP2S1Q96SQ9 504 aa11.63□□□□□ -0.55
CPSF7-212ENST00000489728 RNF38Q9H0F5 515 aa11.63□□□□□ -0.55
CPSF7-212ENST00000489728 NUCKS1Q9H1E3 243 aaKnown RBP11.63□□□□□ -0.55
CPSF7-212ENST00000489728 EPHX3Q9H6B9 360 aa11.63□□□□□ -0.55
CPSF7-212ENST00000489728 CCSER2Q9H7U1 834 aa11.63□□□□□ -0.55
CPSF7-212ENST00000489728 NMUR1Q9HB89 426 aa11.63□□□□□ -0.55
CPSF7-212ENST00000489728 NLRC4Q9NPP4 1024 aa11.63□□□□□ -0.55
CPSF7-212ENST00000489728 ARHGEF3Q9NR81 526 aa11.63□□□□□ -0.55
CPSF7-212ENST00000489728 ABCC13Q9NSE7 274 aa11.63□□□□□ -0.55
CPSF7-212ENST00000489728 DNMT3LQ9UJW3 386 aa11.63□□□□□ -0.55
CPSF7-212ENST00000489728 NOCTQ9UK39 431 aaKnown RBP11.63□□□□□ -0.55
CPSF7-212ENST00000489728 FBXL21Q9UKT6 434 aa11.63□□□□□ -0.55
CPSF7-212ENST00000489728 CCL26Q9Y258 94 aa11.63□□□□□ -0.55
CPSF7-212ENST00000489728 CPQQ9Y646 472 aa11.63□□□□□ -0.55
CPSF7-212ENST00000489728 ITIH6Q6UXX5 1313 aa11.62□□□□□ -0.55
CPSF7-212ENST00000489728 A0A1W2PQJ5 194 aa11.62□□□□□ -0.55
CPSF7-212ENST00000489728 LEFTY2O00292 366 aa11.62□□□□□ -0.55
CPSF7-212ENST00000489728 GFPT2O94808 682 aa11.62□□□□□ -0.55
CPSF7-212ENST00000489728 GLI1P08151 1106 aa11.62□□□□□ -0.55
CPSF7-212ENST00000489728 CFHP08603 1231 aa11.62□□□□□ -0.55
CPSF7-212ENST00000489728 PNMA6AP0CW24 399 aaPredicted RBP11.62□□□□□ -0.55
CPSF7-212ENST00000489728 MBL2P11226 248 aaPredicted RBP11.62□□□□□ -0.55
CPSF7-212ENST00000489728 RARGP13631 454 aa11.62□□□□□ -0.55
CPSF7-212ENST00000489728 SCNN1AP37088 669 aa11.62□□□□□ -0.55
CPSF7-212ENST00000489728 CDR2Q01850 454 aa11.62□□□□□ -0.55
CPSF7-212ENST00000489728 TMEM31Q5JXX7 168 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms