RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 PCDHGA12O60330 932 aa16.25■□□□□ 0.19
U2AF1-211ENST00000486519 ABL1P00519 1130 aa16.25■□□□□ 0.19
U2AF1-211ENST00000486519 OR52Z1P0C646 297 aa16.25■□□□□ 0.19
U2AF1-211ENST00000486519 XBP1P17861 261 aa16.25■□□□□ 0.19
U2AF1-211ENST00000486519 HNF1BP35680 557 aa16.25■□□□□ 0.19
U2AF1-211ENST00000486519 ACADVLP49748 655 aa16.25■□□□□ 0.19
U2AF1-211ENST00000486519 TPMTP51580 245 aa16.25■□□□□ 0.19
U2AF1-211ENST00000486519 WNT7BP56706 349 aa16.25■□□□□ 0.19
U2AF1-211ENST00000486519 ZNF174Q15697 407 aa16.25■□□□□ 0.19
U2AF1-211ENST00000486519 ANO4Q32M45 955 aa16.25■□□□□ 0.19
U2AF1-211ENST00000486519 PRAMEF14Q5SWL7 426 aa16.25■□□□□ 0.19
U2AF1-211ENST00000486519 KIAA1614Q5VZ46 1190 aa16.25■□□□□ 0.19
U2AF1-211ENST00000486519 DIS3L2Q8IYB7 885 aaKnown RBP16.25■□□□□ 0.19
U2AF1-211ENST00000486519 CADM4Q8NFZ8 388 aa16.25■□□□□ 0.19
U2AF1-211ENST00000486519 SPIRE2Q8WWL2 714 aa16.25■□□□□ 0.19
U2AF1-211ENST00000486519 TSC1Q92574 1164 aa16.25■□□□□ 0.19
U2AF1-211ENST00000486519 BICD1Q96G01 975 aa16.25■□□□□ 0.19
U2AF1-211ENST00000486519 MED8Q96G25 268 aa16.25■□□□□ 0.19
U2AF1-211ENST00000486519 ZSWIM6Q9HCJ5 1215 aa16.25■□□□□ 0.19
U2AF1-211ENST00000486519 ITM2CQ9NQX7 267 aa16.25■□□□□ 0.19
U2AF1-211ENST00000486519 TRPM5Q9NZQ8 1165 aa16.25■□□□□ 0.19
U2AF1-211ENST00000486519 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.25■□□□□ 0.19
U2AF1-211ENST00000486519 NPHP3-ACAD11A0A0J9YXS1 232 aa16.24■□□□□ 0.19
U2AF1-211ENST00000486519 RFPL3O75679 317 aa16.24■□□□□ 0.19
U2AF1-211ENST00000486519 NTRK1P04629 796 aa16.24■□□□□ 0.19
U2AF1-211ENST00000486519 MBL2P11226 248 aaPredicted RBP16.24■□□□□ 0.19
U2AF1-211ENST00000486519 PLS3P13797 630 aa16.24■□□□□ 0.19
U2AF1-211ENST00000486519 MUTP22033 750 aa16.24■□□□□ 0.19
U2AF1-211ENST00000486519 PAX3P23760 479 aa16.24■□□□□ 0.19
U2AF1-211ENST00000486519 CDC25AP30304 524 aa16.24■□□□□ 0.19
U2AF1-211ENST00000486519 ACOT2P49753 483 aa16.24■□□□□ 0.19
U2AF1-211ENST00000486519 CCT8P50990 548 aa16.24■□□□□ 0.19
U2AF1-211ENST00000486519 CFAP221Q4G0U5 840 aa16.24■□□□□ 0.19
U2AF1-211ENST00000486519 SPATA2LQ8IUW3 424 aaPredicted RBP16.24■□□□□ 0.19
U2AF1-211ENST00000486519 SNX19Q92543 992 aa16.24■□□□□ 0.19
U2AF1-211ENST00000486519 ACBD6Q9BR61 282 aa16.24■□□□□ 0.19
U2AF1-211ENST00000486519 C6orf106Q9H6K1 298 aaPredicted RBP16.24■□□□□ 0.19
U2AF1-211ENST00000486519 TMEM30AQ9NV96 361 aa16.24■□□□□ 0.19
U2AF1-211ENST00000486519 DNAJC17Q9NVM6 304 aaKnown RBP16.24■□□□□ 0.19
U2AF1-211ENST00000486519 ANKMY1Q9P2S6 941 aa16.24■□□□□ 0.19
U2AF1-211ENST00000486519 LRWD1Q9UFC0 647 aa16.24■□□□□ 0.19
U2AF1-211ENST00000486519 PCDHGA1Q9Y5H4 931 aa16.24■□□□□ 0.19
U2AF1-211ENST00000486519 A0A0B4J269 797 aa16.23■□□□□ 0.19
U2AF1-211ENST00000486519 E2F8A0AVK6 867 aa16.23■□□□□ 0.19
U2AF1-211ENST00000486519 ZBTB24O43167 697 aaPredicted RBP16.23■□□□□ 0.19
U2AF1-211ENST00000486519 TMPRSS3P57727 454 aa16.23■□□□□ 0.19
U2AF1-211ENST00000486519 PSMC1P62191 440 aaKnown RBP16.23■□□□□ 0.19
U2AF1-211ENST00000486519 SHBQ15464 509 aa16.23■□□□□ 0.19
U2AF1-211ENST00000486519 BTBD8Q5XKL5 378 aa16.23■□□□□ 0.19
U2AF1-211ENST00000486519 HAUS3Q68CZ6 603 aa16.23■□□□□ 0.19
U2AF1-211ENST00000486519 GRAMD4Q6IC98 578 aa16.23■□□□□ 0.19
U2AF1-211ENST00000486519 FAM124AQ86V42 546 aa16.23■□□□□ 0.19
U2AF1-211ENST00000486519 KIAA1958Q8N8K9 716 aa16.23■□□□□ 0.19
U2AF1-211ENST00000486519 TTLL2Q9BWV7 592 aa16.23■□□□□ 0.19
U2AF1-211ENST00000486519 IKZF4Q9H2S9 585 aa16.23■□□□□ 0.19
U2AF1-211ENST00000486519 TM9SF3Q9HD45 589 aa16.23■□□□□ 0.19
U2AF1-211ENST00000486519 SPHK2Q9NRA0 654 aa16.23■□□□□ 0.19
U2AF1-211ENST00000486519 RELNP78509 3460 aa16.22■□□□□ 0.19
U2AF1-211ENST00000486519 ARID1BQ8NFD5 2236 aaPredicted RBP16.22■□□□□ 0.19
U2AF1-211ENST00000486519 TERTO14746 1132 aaKnown RBP16.22■□□□□ 0.19
U2AF1-211ENST00000486519 PFKLP17858 780 aa16.22■□□□□ 0.19
U2AF1-211ENST00000486519 BDNFP23560 247 aa16.22■□□□□ 0.19
U2AF1-211ENST00000486519 PSMA5P28066 241 aa16.22■□□□□ 0.19
U2AF1-211ENST00000486519 ACTN2P35609 894 aa16.22■□□□□ 0.19
U2AF1-211ENST00000486519 LIG4P49917 911 aa16.22■□□□□ 0.19
U2AF1-211ENST00000486519 PDE6CP51160 858 aa16.22■□□□□ 0.19
U2AF1-211ENST00000486519 AFF3P51826 1226 aaKnown RBP16.22■□□□□ 0.19
U2AF1-211ENST00000486519 CACNA2D1P54289 1103 aa16.22■□□□□ 0.19
U2AF1-211ENST00000486519 NFATC3Q12968 1075 aa16.22■□□□□ 0.19
U2AF1-211ENST00000486519 SV2CQ496J9 727 aa16.22■□□□□ 0.19
U2AF1-211ENST00000486519 BMP2KLQ5H9B9 411 aa16.22■□□□□ 0.19
U2AF1-211ENST00000486519 SDE2Q6IQ49 451 aa16.22■□□□□ 0.19
U2AF1-211ENST00000486519 SNX29Q8TEQ0 813 aa16.22■□□□□ 0.19
U2AF1-211ENST00000486519 IGSF8Q969P0 613 aa16.22■□□□□ 0.19
U2AF1-211ENST00000486519 MYLPFQ96A32 169 aa16.22■□□□□ 0.19
U2AF1-211ENST00000486519 CNDP2Q96KP4 475 aaKnown RBP16.22■□□□□ 0.19
U2AF1-211ENST00000486519 TSPAN18Q96SJ8 248 aa16.22■□□□□ 0.19
U2AF1-211ENST00000486519 MSTO1Q9BUK6 570 aa16.22■□□□□ 0.19
U2AF1-211ENST00000486519 C17orf75Q9HAS0 396 aa16.22■□□□□ 0.19
U2AF1-211ENST00000486519 CRTAC1Q9NQ79 661 aa16.22■□□□□ 0.19
U2AF1-211ENST00000486519 DERAQ9Y315 318 aa16.22■□□□□ 0.19
U2AF1-211ENST00000486519 STON1Q9Y6Q2 735 aa16.22■□□□□ 0.19
U2AF1-211ENST00000486519 MYO9AB2RTY4 2548 aa16.21■□□□□ 0.19
U2AF1-211ENST00000486519 ANKRD63C9JTQ0 380 aa16.21■□□□□ 0.19
U2AF1-211ENST00000486519 CDKL5O76039 1030 aa16.21■□□□□ 0.19
U2AF1-211ENST00000486519 CTSKP43235 329 aa16.21■□□□□ 0.19
U2AF1-211ENST00000486519 MAGEA11P43364 429 aa16.21■□□□□ 0.19
U2AF1-211ENST00000486519 NCKAP1LP55160 1127 aa16.21■□□□□ 0.19
U2AF1-211ENST00000486519 TAF10Q12962 218 aa16.21■□□□□ 0.19
U2AF1-211ENST00000486519 FAM171BQ6P995 826 aa16.21■□□□□ 0.19
U2AF1-211ENST00000486519 DENND5BQ6ZUT9 1274 aa16.21■□□□□ 0.19
U2AF1-211ENST00000486519 METTL3Q86U44 580 aaKnown RBP16.21■□□□□ 0.19
U2AF1-211ENST00000486519 C4orf32Q8N8J7 132 aa16.21■□□□□ 0.19
U2AF1-211ENST00000486519 HIC2Q96JB3 615 aa16.21■□□□□ 0.19
U2AF1-211ENST00000486519 SPATA17Q96L03 361 aa16.21■□□□□ 0.19
U2AF1-211ENST00000486519 BRMS1Q9HCU9 246 aa16.21■□□□□ 0.19
U2AF1-211ENST00000486519 TBC1D14Q9P2M4 693 aa16.21■□□□□ 0.19
U2AF1-211ENST00000486519 PCDHB1Q9Y5F3 818 aa16.21■□□□□ 0.19
U2AF1-211ENST00000486519 NEDD8-MDP1E9PL57 170 aa16.2■□□□□ 0.18
U2AF1-211ENST00000486519 HNRNPDLO14979 420 aaKnown RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms