RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 MTRQ99707 1265 aa7.12□□□□□ -1.27
HDAC3-206ENST00000471968 ORAI3Q9BRQ5 295 aa7.12□□□□□ -1.27
HDAC3-206ENST00000471968 ADPGKQ9BRR6 497 aa7.12□□□□□ -1.27
HDAC3-206ENST00000471968 TEKT3Q9BXF9 490 aa7.12□□□□□ -1.27
HDAC3-206ENST00000471968 SLC12A9Q9BXP2 914 aa7.12□□□□□ -1.27
HDAC3-206ENST00000471968 RPF1Q9H9Y2 349 aaKnown RBP7.12□□□□□ -1.27
HDAC3-206ENST00000471968 PPM1HQ9ULR3 514 aa7.12□□□□□ -1.27
HDAC3-206ENST00000471968 ARHGAP26Q9UNA1 814 aa7.12□□□□□ -1.27
HDAC3-206ENST00000471968 TP53TG5Q9Y2B4 290 aa7.12□□□□□ -1.27
HDAC3-206ENST00000471968 PCDHGA7Q9Y5G6 932 aa7.12□□□□□ -1.27
HDAC3-206ENST00000471968 EFCAB7A8K855 629 aa7.11□□□□□ -1.27
HDAC3-206ENST00000471968 IFIT3O14879 490 aaKnown RBP7.11□□□□□ -1.27
HDAC3-206ENST00000471968 MSH4O15457 936 aa7.11□□□□□ -1.27
HDAC3-206ENST00000471968 CKMT1AP12532 417 aa7.11□□□□□ -1.27
HDAC3-206ENST00000471968 HDCP19113 662 aa7.11□□□□□ -1.27
HDAC3-206ENST00000471968 TGM2P21980 687 aa7.11□□□□□ -1.27
HDAC3-206ENST00000471968 GAD2Q05329 585 aa7.11□□□□□ -1.27
HDAC3-206ENST00000471968 POU5F1BQ06416 359 aa7.11□□□□□ -1.27
HDAC3-206ENST00000471968 MYBPC2Q14324 1141 aa7.11□□□□□ -1.27
HDAC3-206ENST00000471968 HS1BP3Q53T59 392 aa7.11□□□□□ -1.27
HDAC3-206ENST00000471968 TYW1BQ6NUM6 668 aa7.11□□□□□ -1.27
HDAC3-206ENST00000471968 ETFBKMTQ8IXQ9 262 aa7.11□□□□□ -1.27
HDAC3-206ENST00000471968 GLIS1Q8NBF1 620 aa7.11□□□□□ -1.27
HDAC3-206ENST00000471968 SCFD1Q8WVM8 642 aa7.11□□□□□ -1.27
HDAC3-206ENST00000471968 CRYGNQ8WXF5 182 aa7.11□□□□□ -1.27
HDAC3-206ENST00000471968 C18orf25Q96B23 403 aaPredicted RBP7.11□□□□□ -1.27
HDAC3-206ENST00000471968 LENG9Q96B70 501 aa7.11□□□□□ -1.27
HDAC3-206ENST00000471968 TMUB1Q9BVT8 246 aa7.11□□□□□ -1.27
HDAC3-206ENST00000471968 GSX1Q9H4S2 264 aaPredicted RBP7.11□□□□□ -1.27
HDAC3-206ENST00000471968 CNNM2Q9H8M5 875 aa7.11□□□□□ -1.27
HDAC3-206ENST00000471968 AASDHPPTQ9NRN7 309 aa7.11□□□□□ -1.27
HDAC3-206ENST00000471968 SLC38A7Q9NVC3 462 aa7.11□□□□□ -1.27
HDAC3-206ENST00000471968 GCNT4Q9P109 453 aa7.11□□□□□ -1.27
HDAC3-206ENST00000471968 SLC5A6Q9Y289 635 aa7.11□□□□□ -1.27
HDAC3-206ENST00000471968 USP20Q9Y2K6 914 aa7.11□□□□□ -1.27
HDAC3-206ENST00000471968 PCDHB11Q9Y5F2 797 aa7.11□□□□□ -1.27
HDAC3-206ENST00000471968 NUMA1Q14980 2115 aa7.1□□□□□ -1.27
HDAC3-206ENST00000471968 TP53BP1Q12888 1972 aaPredicted RBP7.1□□□□□ -1.27
HDAC3-206ENST00000471968 DENND4CQ5VZ89 1909 aa7.1□□□□□ -1.27
HDAC3-206ENST00000471968 CCDC187A0A096LP49 1063 aa7.1□□□□□ -1.27
HDAC3-206ENST00000471968 ERICH2A1L162 156 aa7.1□□□□□ -1.27
HDAC3-206ENST00000471968 HEATR9A2RTY3 570 aa7.1□□□□□ -1.27
HDAC3-206ENST00000471968 TCP11X1B4DZS4 312 aa7.1□□□□□ -1.27
HDAC3-206ENST00000471968 PRRT4C9JH25 899 aa7.1□□□□□ -1.27
HDAC3-206ENST00000471968 SLC9A3R1O14745 358 aaPredicted RBP7.1□□□□□ -1.27
HDAC3-206ENST00000471968 SEMA4FO95754 770 aa7.1□□□□□ -1.27
HDAC3-206ENST00000471968 GP1BAP07359 652 aa7.1□□□□□ -1.27
HDAC3-206ENST00000471968 CD1EP15812 388 aa7.1□□□□□ -1.27
HDAC3-206ENST00000471968 RPL9P32969 192 aaKnown RBP7.1□□□□□ -1.27
HDAC3-206ENST00000471968 RXRGP48443 463 aa7.1□□□□□ -1.27
HDAC3-206ENST00000471968 GPR15P49685 360 aa7.1□□□□□ -1.27
HDAC3-206ENST00000471968 PSMC5P62195 406 aa7.1□□□□□ -1.27
HDAC3-206ENST00000471968 SDHAF4Q5VUM1 108 aa7.1□□□□□ -1.27
HDAC3-206ENST00000471968 EEF1DP3Q658K8 133 aa7.1□□□□□ -1.27
HDAC3-206ENST00000471968 WWC2Q6AWC2 1192 aa7.1□□□□□ -1.27
HDAC3-206ENST00000471968 OVOS1Q6IE37 1185 aa7.1□□□□□ -1.27
HDAC3-206ENST00000471968 RBM44Q6ZP01 1051 aaKnown RBP7.1□□□□□ -1.27
HDAC3-206ENST00000471968 PRIMA1Q86XR5 153 aa7.1□□□□□ -1.27
HDAC3-206ENST00000471968 XYLT1Q86Y38 959 aa7.1□□□□□ -1.27
HDAC3-206ENST00000471968 LRRN4CLQ8ND94 238 aa7.1□□□□□ -1.27
HDAC3-206ENST00000471968 RDM1Q8NG50 284 aa7.1□□□□□ -1.27
HDAC3-206ENST00000471968 ZMAT2Q96NC0 199 aaKnown RBP7.1□□□□□ -1.27
HDAC3-206ENST00000471968 RIT2Q99578 217 aa7.1□□□□□ -1.27
HDAC3-206ENST00000471968 LZTS2Q9BRK4 669 aa7.1□□□□□ -1.27
HDAC3-206ENST00000471968 NFKBIZQ9BYH8 718 aa7.1□□□□□ -1.27
HDAC3-206ENST00000471968 PRMT7Q9NVM4 692 aaPredicted RBP7.1□□□□□ -1.27
HDAC3-206ENST00000471968 ACSL6Q9UKU0 697 aa7.1□□□□□ -1.27
HDAC3-206ENST00000471968 STON1Q9Y6Q2 735 aa7.1□□□□□ -1.27
HDAC3-206ENST00000471968 KIF26BQ2KJY2 2108 aa7.1□□□□□ -1.27
HDAC3-206ENST00000471968 OBSL1O75147 1896 aa7.09□□□□□ -1.27
HDAC3-206ENST00000471968 MYOFQ9NZM1 2061 aa7.09□□□□□ -1.27
HDAC3-206ENST00000471968 CUBNO60494 3623 aa7.09□□□□□ -1.27
HDAC3-206ENST00000471968 SMCO2A6NFE2 343 aa7.09□□□□□ -1.27
HDAC3-206ENST00000471968 M0QZQ0 153 aa7.09□□□□□ -1.27
HDAC3-206ENST00000471968 GFRA2O00451 464 aa7.09□□□□□ -1.27
HDAC3-206ENST00000471968 PLD2O14939 933 aa7.09□□□□□ -1.27
HDAC3-206ENST00000471968 FFAR2O15552 330 aa7.09□□□□□ -1.27
HDAC3-206ENST00000471968 PPP1R37O75864 691 aa7.09□□□□□ -1.27
HDAC3-206ENST00000471968 CSH1P0DML2 217 aa7.09□□□□□ -1.27
HDAC3-206ENST00000471968 CSH2P0DML3 217 aa7.09□□□□□ -1.27
HDAC3-206ENST00000471968 HAPLN1P10915 354 aaPredicted RBP7.09□□□□□ -1.27
HDAC3-206ENST00000471968 GLRA2P23416 452 aa7.09□□□□□ -1.27
HDAC3-206ENST00000471968 CD38P28907 300 aa7.09□□□□□ -1.27
HDAC3-206ENST00000471968 CLK2P49760 499 aaKnown RBP7.09□□□□□ -1.27
HDAC3-206ENST00000471968 HDAC4P56524 1084 aa7.09□□□□□ -1.27
HDAC3-206ENST00000471968 ANO4Q32M45 955 aa7.09□□□□□ -1.27
HDAC3-206ENST00000471968 GRAMD4Q6IC98 578 aa7.09□□□□□ -1.27
HDAC3-206ENST00000471968 PPP4R3CPQ6ZMV5 832 aa7.09□□□□□ -1.27
HDAC3-206ENST00000471968 CDH24Q86UP0 819 aa7.09□□□□□ -1.27
HDAC3-206ENST00000471968 ZFAND4Q86XD8 727 aa7.09□□□□□ -1.27
HDAC3-206ENST00000471968 OR10T2Q8NGX3 314 aa7.09□□□□□ -1.27
HDAC3-206ENST00000471968 IFI44Q8TCB0 444 aa7.09□□□□□ -1.27
HDAC3-206ENST00000471968 JPH3Q8WXH2 748 aaPredicted RBP7.09□□□□□ -1.27
HDAC3-206ENST00000471968 DRC1Q96MC2 740 aa7.09□□□□□ -1.27
HDAC3-206ENST00000471968 XPNPEP1Q9NQW7 623 aa7.09□□□□□ -1.27
HDAC3-206ENST00000471968 SMPD4Q9NXE4 827 aa7.09□□□□□ -1.27
HDAC3-206ENST00000471968 ABI2Q9NYB9 513 aaPredicted RBP7.09□□□□□ -1.27
HDAC3-206ENST00000471968 UXTQ9UBK9 157 aaPredicted RBP7.09□□□□□ -1.27
HDAC3-206ENST00000471968 KCND3Q9UK17 655 aa7.09□□□□□ -1.27
HDAC3-206ENST00000471968 PPME1Q9Y570 386 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms