RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 ACP6Q9NPH0 428 aa6.7□□□□□ -1.34
SF3B1-206ENST00000462613 ABCC13Q9NSE7 274 aa6.7□□□□□ -1.34
SF3B1-206ENST00000462613 TDP1Q9NUW8 608 aa6.7□□□□□ -1.34
SF3B1-206ENST00000462613 TMEM51Q9NW97 253 aa6.7□□□□□ -1.34
SF3B1-206ENST00000462613 OBP2AQ9NY56 170 aa6.7□□□□□ -1.34
SF3B1-206ENST00000462613 CLIC5Q9NZA1 410 aa6.7□□□□□ -1.34
SF3B1-206ENST00000462613 IL37Q9NZH6 218 aa6.7□□□□□ -1.34
SF3B1-206ENST00000462613 AIPL1Q9NZN9 384 aa6.7□□□□□ -1.34
SF3B1-206ENST00000462613 GMIPQ9P107 970 aa6.7□□□□□ -1.34
SF3B1-206ENST00000462613 WDR35Q9P2L0 1181 aa6.7□□□□□ -1.34
SF3B1-206ENST00000462613 LIMD1Q9UGP4 676 aa6.7□□□□□ -1.34
SF3B1-206ENST00000462613 CHORDC1Q9UHD1 332 aaPredicted RBP6.7□□□□□ -1.34
SF3B1-206ENST00000462613 CDH22Q9UJ99 828 aa6.7□□□□□ -1.34
SF3B1-206ENST00000462613 DNMT3LQ9UJW3 386 aa6.7□□□□□ -1.34
SF3B1-206ENST00000462613 LSM7Q9UK45 103 aaKnown RBP6.7□□□□□ -1.34
SF3B1-206ENST00000462613 SORCS3Q9UPU3 1222 aa6.7□□□□□ -1.34
SF3B1-206ENST00000462613 SH3BP1Q9Y3L3 701 aa6.7□□□□□ -1.34
SF3B1-206ENST00000462613 USP3Q9Y6I4 520 aa6.7□□□□□ -1.34
SF3B1-206ENST00000462613 MYOFQ9NZM1 2061 aa6.7□□□□□ -1.34
SF3B1-206ENST00000462613 ZNF840PA6NDX5 716 aa6.69□□□□□ -1.34
SF3B1-206ENST00000462613 HHLA1C9JL84 531 aa6.69□□□□□ -1.34
SF3B1-206ENST00000462613 AKR1B15C9JRZ8 316 aaPredicted RBP6.69□□□□□ -1.34
SF3B1-206ENST00000462613 E5RJQ4 531 aa6.69□□□□□ -1.34
SF3B1-206ENST00000462613 SLC9A3R1O14745 358 aaPredicted RBP6.69□□□□□ -1.34
SF3B1-206ENST00000462613 AKR1B10O60218 316 aa6.69□□□□□ -1.34
SF3B1-206ENST00000462613 TLR5O60602 858 aa6.69□□□□□ -1.34
SF3B1-206ENST00000462613 HSF2BPO75031 334 aa6.69□□□□□ -1.34
SF3B1-206ENST00000462613 ECI2O75521 394 aa6.69□□□□□ -1.34
SF3B1-206ENST00000462613 IPO7O95373 1038 aaKnown RBP6.69□□□□□ -1.34
SF3B1-206ENST00000462613 LTFP02788 710 aa6.69□□□□□ -1.34
SF3B1-206ENST00000462613 GYPCP04921 128 aa6.69□□□□□ -1.34
SF3B1-206ENST00000462613 CALB1P05937 261 aa6.69□□□□□ -1.34
SF3B1-206ENST00000462613 GLI1P08151 1106 aa6.69□□□□□ -1.34
SF3B1-206ENST00000462613 MMEP08473 750 aa6.69□□□□□ -1.34
SF3B1-206ENST00000462613 RARGP13631 454 aa6.69□□□□□ -1.34
SF3B1-206ENST00000462613 ALADP13716 330 aa6.69□□□□□ -1.34
SF3B1-206ENST00000462613 PSMC3P17980 439 aa6.69□□□□□ -1.34
SF3B1-206ENST00000462613 WEE1P30291 646 aa6.69□□□□□ -1.34
SF3B1-206ENST00000462613 GBP1P32455 592 aa6.69□□□□□ -1.34
SF3B1-206ENST00000462613 CDH5P33151 784 aaPredicted RBP6.69□□□□□ -1.34
SF3B1-206ENST00000462613 CCR2P41597 374 aa6.69□□□□□ -1.34
SF3B1-206ENST00000462613 PRKCIP41743 596 aa6.69□□□□□ -1.34
SF3B1-206ENST00000462613 ZNF75DP51815 510 aa6.69□□□□□ -1.34
SF3B1-206ENST00000462613 KPNA1P52294 538 aaPredicted RBP6.69□□□□□ -1.34
SF3B1-206ENST00000462613 DAOAP59103 153 aa6.69□□□□□ -1.34
SF3B1-206ENST00000462613 COG7P83436 770 aa6.69□□□□□ -1.34
SF3B1-206ENST00000462613 AMPD2Q01433 879 aa6.69□□□□□ -1.34
SF3B1-206ENST00000462613 PFKPQ01813 784 aa6.69□□□□□ -1.34
SF3B1-206ENST00000462613 TDGQ13569 410 aa6.69□□□□□ -1.34
SF3B1-206ENST00000462613 ZNF268Q14587 947 aaPredicted RBP6.69□□□□□ -1.34
SF3B1-206ENST00000462613 PTPN21Q16825 1174 aa6.69□□□□□ -1.34
SF3B1-206ENST00000462613 ARHGAP29Q52LW3 1261 aa6.69□□□□□ -1.34
SF3B1-206ENST00000462613 SNX30Q5VWJ9 437 aa6.69□□□□□ -1.34
SF3B1-206ENST00000462613 NAA35Q5VZE5 725 aa6.69□□□□□ -1.34
SF3B1-206ENST00000462613 PM20D1Q6GTS8 502 aa6.69□□□□□ -1.34
SF3B1-206ENST00000462613 KLHDC10Q6PID8 442 aa6.69□□□□□ -1.34
SF3B1-206ENST00000462613 GPRIN1Q7Z2K8 1008 aa6.69□□□□□ -1.34
SF3B1-206ENST00000462613 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.69□□□□□ -1.34
SF3B1-206ENST00000462613 TMEM110Q86TL2 294 aa6.69□□□□□ -1.34
SF3B1-206ENST00000462613 GAS2L3Q86XJ1 694 aa6.69□□□□□ -1.34
SF3B1-206ENST00000462613 UBALD2Q8IYN6 164 aa6.69□□□□□ -1.34
SF3B1-206ENST00000462613 ZNF276Q8N554 614 aa6.69□□□□□ -1.34
SF3B1-206ENST00000462613 ARL14EPQ8N8R7 260 aaPredicted RBP6.69□□□□□ -1.34
SF3B1-206ENST00000462613 BPIFB1Q8TDL5 484 aa6.69□□□□□ -1.34
SF3B1-206ENST00000462613 CSGALNACT1Q8TDX6 532 aa6.69□□□□□ -1.34
SF3B1-206ENST00000462613 BAP1Q92560 729 aa6.69□□□□□ -1.34
SF3B1-206ENST00000462613 IRF7Q92985 503 aa6.69□□□□□ -1.34
SF3B1-206ENST00000462613 TRIM11Q96F44 468 aa6.69□□□□□ -1.34
SF3B1-206ENST00000462613 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.69□□□□□ -1.34
SF3B1-206ENST00000462613 TRMT61BQ9BVS5 477 aaKnown RBP6.69□□□□□ -1.34
SF3B1-206ENST00000462613 SLC4A5Q9BY07 1137 aa6.69□□□□□ -1.34
SF3B1-206ENST00000462613 TTYH3Q9C0H2 523 aa6.69□□□□□ -1.34
SF3B1-206ENST00000462613 HAUS4Q9H6D7 363 aa6.69□□□□□ -1.34
SF3B1-206ENST00000462613 BRD9Q9H8M2 597 aa6.69□□□□□ -1.34
SF3B1-206ENST00000462613 POPDC2Q9HBU9 364 aa6.69□□□□□ -1.34
SF3B1-206ENST00000462613 LUC7LQ9NQ29 371 aaKnown RBP6.69□□□□□ -1.34
SF3B1-206ENST00000462613 TMEM30AQ9NV96 361 aa6.69□□□□□ -1.34
SF3B1-206ENST00000462613 RRN3Q9NYV6 651 aa6.69□□□□□ -1.34
SF3B1-206ENST00000462613 TBC1D14Q9P2M4 693 aa6.69□□□□□ -1.34
SF3B1-206ENST00000462613 RASAL2Q9UJF2 1139 aa6.69□□□□□ -1.34
SF3B1-206ENST00000462613 NOCTQ9UK39 431 aaKnown RBP6.69□□□□□ -1.34
SF3B1-206ENST00000462613 STAP1Q9ULZ2 295 aa6.69□□□□□ -1.34
SF3B1-206ENST00000462613 ARHGAP26Q9UNA1 814 aa6.69□□□□□ -1.34
SF3B1-206ENST00000462613 PAXBP1Q9Y5B6 917 aa6.69□□□□□ -1.34
SF3B1-206ENST00000462613 NUMBLQ9Y6R0 609 aa6.69□□□□□ -1.34
SF3B1-206ENST00000462613 PRUNE2Q8WUY3 3088 aa6.69□□□□□ -1.34
SF3B1-206ENST00000462613 A0A1W2PQH9 124 aa6.68□□□□□ -1.34
SF3B1-206ENST00000462613 C2orf78A6NCI8 922 aa6.68□□□□□ -1.34
SF3B1-206ENST00000462613 C19orf67A6NJJ6 358 aa6.68□□□□□ -1.34
SF3B1-206ENST00000462613 HEPACAM2A8MVW5 462 aa6.68□□□□□ -1.34
SF3B1-206ENST00000462613 TULP2O00295 520 aa6.68□□□□□ -1.34
SF3B1-206ENST00000462613 PIK3R2O00459 728 aa6.68□□□□□ -1.34
SF3B1-206ENST00000462613 ZNF263O14978 683 aa6.68□□□□□ -1.34
SF3B1-206ENST00000462613 MFAP3LO75121 409 aa6.68□□□□□ -1.34
SF3B1-206ENST00000462613 TADA3O75528 432 aa6.68□□□□□ -1.34
SF3B1-206ENST00000462613 OAS1P00973 400 aaKnown RBP6.68□□□□□ -1.34
SF3B1-206ENST00000462613 CALCAP01258 141 aa6.68□□□□□ -1.34
SF3B1-206ENST00000462613 ZDHHC11BP0C7U3 371 aa6.68□□□□□ -1.34
SF3B1-206ENST00000462613 SRFP11831 508 aa6.68□□□□□ -1.34
SF3B1-206ENST00000462613 GZMAP12544 262 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms