RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 JRKO75564 520 aa11.13□□□□□ -0.63
LINC00342-202ENST00000448494 CAPNS1P04632 268 aa11.13□□□□□ -0.63
LINC00342-202ENST00000448494 NMT1P30419 496 aaKnown RBP11.13□□□□□ -0.63
LINC00342-202ENST00000448494 CTBSQ01459 385 aa11.13□□□□□ -0.63
LINC00342-202ENST00000448494 CTTNQ14247 550 aaKnown RBP11.13□□□□□ -0.63
LINC00342-202ENST00000448494 ZNF846Q147U1 533 aa11.13□□□□□ -0.63
LINC00342-202ENST00000448494 IL17AQ16552 155 aa11.13□□□□□ -0.63
LINC00342-202ENST00000448494 EARS2Q5JPH6 523 aaKnown RBP11.13□□□□□ -0.63
LINC00342-202ENST00000448494 PRR23CQ6ZRP0 262 aa11.13□□□□□ -0.63
LINC00342-202ENST00000448494 ZNF571Q7Z3V5 609 aaPredicted RBP11.13□□□□□ -0.63
LINC00342-202ENST00000448494 TXNDC2Q86VQ3 553 aa11.13□□□□□ -0.63
LINC00342-202ENST00000448494 ZNF276Q8N554 614 aa11.13□□□□□ -0.63
LINC00342-202ENST00000448494 NLRP7Q8WX94 980 aa11.13□□□□□ -0.63
LINC00342-202ENST00000448494 HERVK_113Q902F9 699 aa11.13□□□□□ -0.63
LINC00342-202ENST00000448494 TANKQ92844 425 aa11.13□□□□□ -0.63
LINC00342-202ENST00000448494 ZNF347Q96SE7 839 aa11.13□□□□□ -0.63
LINC00342-202ENST00000448494 SLC29A1Q99808 456 aa11.13□□□□□ -0.63
LINC00342-202ENST00000448494 MYL10Q9BUA6 226 aa11.13□□□□□ -0.63
LINC00342-202ENST00000448494 MKNK1Q9BUB5 465 aa11.13□□□□□ -0.63
LINC00342-202ENST00000448494 POLMQ9NP87 494 aaPredicted RBP11.13□□□□□ -0.63
LINC00342-202ENST00000448494 SNTG2Q9NY99 539 aa11.13□□□□□ -0.63
LINC00342-202ENST00000448494 SLC8A2Q9UPR5 921 aa11.13□□□□□ -0.63
LINC00342-202ENST00000448494 TRAF6Q9Y4K3 522 aa11.13□□□□□ -0.63
LINC00342-202ENST00000448494 TEX51A0A1B0GUA7 166 aa11.13□□□□□ -0.63
LINC00342-202ENST00000448494 ESYT2A0FGR8 921 aa11.13□□□□□ -0.63
LINC00342-202ENST00000448494 OR5K4A6NMS3 321 aa11.13□□□□□ -0.63
LINC00342-202ENST00000448494 BTBD11A6QL63 1104 aa11.13□□□□□ -0.63
LINC00342-202ENST00000448494 SHOXO15266 292 aa11.13□□□□□ -0.63
LINC00342-202ENST00000448494 TP73O15350 636 aa11.13□□□□□ -0.63
LINC00342-202ENST00000448494 TGM1P22735 817 aa11.13□□□□□ -0.63
LINC00342-202ENST00000448494 PPATQ06203 517 aa11.13□□□□□ -0.63
LINC00342-202ENST00000448494 BNIP3Q12983 259 aa11.13□□□□□ -0.63
LINC00342-202ENST00000448494 C6orf52Q5T4I8 152 aa11.13□□□□□ -0.63
LINC00342-202ENST00000448494 LMOD2Q6P5Q4 547 aa11.13□□□□□ -0.63
LINC00342-202ENST00000448494 AFAP1L2Q8N4X5 818 aa11.13□□□□□ -0.63
LINC00342-202ENST00000448494 ZC3H15Q8WU90 426 aaKnown RBP11.13□□□□□ -0.63
LINC00342-202ENST00000448494 ASIC4Q96FT7 647 aa11.13□□□□□ -0.63
LINC00342-202ENST00000448494 CDK5RAP1Q96SZ6 601 aaKnown RBP11.13□□□□□ -0.63
LINC00342-202ENST00000448494 DIABLOQ9NR28 239 aa11.13□□□□□ -0.63
LINC00342-202ENST00000448494 PNPLA3Q9NST1 481 aa11.13□□□□□ -0.63
LINC00342-202ENST00000448494 BCAP29Q9UHQ4 241 aa11.13□□□□□ -0.63
LINC00342-202ENST00000448494 SORCS3Q9UPU3 1222 aa11.13□□□□□ -0.63
LINC00342-202ENST00000448494 A0A087WXM4 84 aa11.12□□□□□ -0.63
LINC00342-202ENST00000448494 MIF4GDA9UHW6 222 aaKnown RBP11.12□□□□□ -0.63
LINC00342-202ENST00000448494 TK2O00142 265 aa11.12□□□□□ -0.63
LINC00342-202ENST00000448494 TM9SF1O15321 606 aa11.12□□□□□ -0.63
LINC00342-202ENST00000448494 GCATO75600 419 aa11.12□□□□□ -0.63
LINC00342-202ENST00000448494 CAPN1P07384 714 aa11.12□□□□□ -0.63
LINC00342-202ENST00000448494 MYL2P10916 166 aa11.12□□□□□ -0.63
LINC00342-202ENST00000448494 ITIH1P19827 911 aa11.12□□□□□ -0.63
LINC00342-202ENST00000448494 ARL1P40616 181 aaPredicted RBP11.12□□□□□ -0.63
LINC00342-202ENST00000448494 HADHAP40939 763 aa11.12□□□□□ -0.63
LINC00342-202ENST00000448494 NR4A2P43354 598 aa11.12□□□□□ -0.63
LINC00342-202ENST00000448494 ARID5AQ03989 594 aa11.12□□□□□ -0.63
LINC00342-202ENST00000448494 KDSRQ06136 332 aa11.12□□□□□ -0.63
LINC00342-202ENST00000448494 ADGRE1Q14246 886 aa11.12□□□□□ -0.63
LINC00342-202ENST00000448494 PDK1Q15118 436 aa11.12□□□□□ -0.63
LINC00342-202ENST00000448494 SYDE1Q6ZW31 735 aaPredicted RBP11.12□□□□□ -0.63
LINC00342-202ENST00000448494 IRF2BP2Q7Z5L9 587 aa11.12□□□□□ -0.63
LINC00342-202ENST00000448494 CLIP4Q8N3C7 705 aa11.12□□□□□ -0.63
LINC00342-202ENST00000448494 SIMC1Q8NDZ2 872 aa11.12□□□□□ -0.63
LINC00342-202ENST00000448494 TNFRSF25Q93038 417 aa11.12□□□□□ -0.63
LINC00342-202ENST00000448494 RMND5BQ96G75 393 aaPredicted RBP11.12□□□□□ -0.63
LINC00342-202ENST00000448494 RMDN3Q96TC7 470 aa11.12□□□□□ -0.63
LINC00342-202ENST00000448494 ATP13A2Q9NQ11 1180 aa11.12□□□□□ -0.63
LINC00342-202ENST00000448494 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.12□□□□□ -0.63
LINC00342-202ENST00000448494 PTBP2Q9UKA9 531 aaKnown RBP11.12□□□□□ -0.63
LINC00342-202ENST00000448494 ARHGAP26Q9UNA1 814 aa11.12□□□□□ -0.63
LINC00342-202ENST00000448494 MON2Q7Z3U7 1717 aa11.12□□□□□ -0.63
LINC00342-202ENST00000448494 A0A1W2PPW3 197 aa11.12□□□□□ -0.63
LINC00342-202ENST00000448494 GOLGA8JA6NMD2 632 aa11.12□□□□□ -0.63
LINC00342-202ENST00000448494 TRIM77I1YAP6 450 aa11.12□□□□□ -0.63
LINC00342-202ENST00000448494 MTA2O94776 668 aa11.12□□□□□ -0.63
LINC00342-202ENST00000448494 CSF1RP07333 972 aa11.12□□□□□ -0.63
LINC00342-202ENST00000448494 GABRB3P28472 473 aa11.12□□□□□ -0.63
LINC00342-202ENST00000448494 RFX5P48382 616 aaPredicted RBP11.12□□□□□ -0.63
LINC00342-202ENST00000448494 ECT2LQ008S8 904 aa11.12□□□□□ -0.63
LINC00342-202ENST00000448494 SMARCB1Q12824 385 aa11.12□□□□□ -0.63
LINC00342-202ENST00000448494 ABCB5Q2M3G0 1257 aa11.12□□□□□ -0.63
LINC00342-202ENST00000448494 METTL2BQ6P1Q9 378 aaKnown RBP11.12□□□□□ -0.63
LINC00342-202ENST00000448494 OTOP3Q7RTS5 596 aa11.12□□□□□ -0.63
LINC00342-202ENST00000448494 IFNL1Q8IU54 200 aa11.12□□□□□ -0.63
LINC00342-202ENST00000448494 CARNMT1Q8N4J0 409 aa11.12□□□□□ -0.63
LINC00342-202ENST00000448494 GRPEL2Q8TAA5 225 aa11.12□□□□□ -0.63
LINC00342-202ENST00000448494 MAP6Q96JE9 813 aa11.12□□□□□ -0.63
LINC00342-202ENST00000448494 CNDP2Q96KP4 475 aaKnown RBP11.12□□□□□ -0.63
LINC00342-202ENST00000448494 C7orf25Q9BPX7 421 aa11.12□□□□□ -0.63
LINC00342-202ENST00000448494 RNF26Q9BY78 433 aaPredicted RBP11.12□□□□□ -0.63
LINC00342-202ENST00000448494 POLHQ9Y253 713 aa11.12□□□□□ -0.63
LINC00342-202ENST00000448494 NWD1Q149M9 1564 aa11.12□□□□□ -0.63
LINC00342-202ENST00000448494 A0A0B4J203 849 aa11.11□□□□□ -0.63
LINC00342-202ENST00000448494 OR5K3A6NET4 321 aa11.11□□□□□ -0.63
LINC00342-202ENST00000448494 MTSS1O43312 755 aa11.11□□□□□ -0.63
LINC00342-202ENST00000448494 ASNA1O43681 348 aa11.11□□□□□ -0.63
LINC00342-202ENST00000448494 PRLP01236 227 aa11.11□□□□□ -0.63
LINC00342-202ENST00000448494 KRT15P19012 456 aa11.11□□□□□ -0.63
LINC00342-202ENST00000448494 TFDP1Q14186 410 aa11.11□□□□□ -0.63
LINC00342-202ENST00000448494 POU6F1Q14863 301 aa11.11□□□□□ -0.63
LINC00342-202ENST00000448494 DUSP7Q16829 419 aa11.11□□□□□ -0.63
LINC00342-202ENST00000448494 LRIT3Q3SXY7 679 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 138.1 ms