RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 CCDC149Q6ZUS6 474 aa22.1■■□□□ 1.13
VPS13B-204ENST00000441350 RTL10Q7L3V2 364 aa22.1■■□□□ 1.13
VPS13B-204ENST00000441350 ADGRD2Q7Z7M1 963 aa22.1■■□□□ 1.13
VPS13B-204ENST00000441350 SLC7A14Q8TBB6 771 aa22.1■■□□□ 1.13
VPS13B-204ENST00000441350 GOLPH3Q9H4A6 298 aa22.1■■□□□ 1.13
VPS13B-204ENST00000441350 ZNF576Q9H609 170 aa22.1■■□□□ 1.13
VPS13B-204ENST00000441350 IP6K2Q9UHH9 426 aa22.1■■□□□ 1.13
VPS13B-204ENST00000441350 LCMT1Q9UIC8 334 aa22.1■■□□□ 1.13
VPS13B-204ENST00000441350 PROSCO94903 275 aa22.09■■□□□ 1.13
VPS13B-204ENST00000441350 TUBB4AP04350 444 aa22.09■■□□□ 1.13
VPS13B-204ENST00000441350 FYNP06241 537 aa22.09■■□□□ 1.13
VPS13B-204ENST00000441350 HMGA1P17096 107 aaKnown RBP22.09■■□□□ 1.13
VPS13B-204ENST00000441350 YWHAQP27348 245 aa22.09■■□□□ 1.13
VPS13B-204ENST00000441350 ZNF143P52747 638 aaPredicted RBP22.09■■□□□ 1.13
VPS13B-204ENST00000441350 IFRD2Q12894 506 aaPredicted RBP22.09■■□□□ 1.13
VPS13B-204ENST00000441350 PLD1Q13393 1074 aa22.09■■□□□ 1.13
VPS13B-204ENST00000441350 DAAM2Q86T65 1068 aa22.09■■□□□ 1.13
VPS13B-204ENST00000441350 SYCE1Q8N0S2 351 aa22.09■■□□□ 1.13
VPS13B-204ENST00000441350 RXFP2Q8WXD0 754 aa22.09■■□□□ 1.13
VPS13B-204ENST00000441350 FAM149B1Q96BN6 582 aa22.09■■□□□ 1.13
VPS13B-204ENST00000441350 MRPL38Q96DV4 380 aaKnown RBP22.09■■□□□ 1.13
VPS13B-204ENST00000441350 SLC2A13Q96QE2 648 aa22.09■■□□□ 1.13
VPS13B-204ENST00000441350 MYO16Q9Y6X6 1858 aa22.09■■□□□ 1.13
VPS13B-204ENST00000441350 KIF2AO00139 706 aaPredicted RBP22.09■■□□□ 1.13
VPS13B-204ENST00000441350 PER2O15055 1255 aa22.09■■□□□ 1.13
VPS13B-204ENST00000441350 DAB1O75553 588 aa22.09■■□□□ 1.13
VPS13B-204ENST00000441350 LTFP02788 710 aa22.09■■□□□ 1.13
VPS13B-204ENST00000441350 C8AP07357 584 aa22.09■■□□□ 1.13
VPS13B-204ENST00000441350 CSH1P0DML2 217 aa22.09■■□□□ 1.13
VPS13B-204ENST00000441350 CSH2P0DML3 217 aa22.09■■□□□ 1.13
VPS13B-204ENST00000441350 GPD1P21695 349 aa22.09■■□□□ 1.13
VPS13B-204ENST00000441350 PTPROQ16827 1216 aa22.09■■□□□ 1.13
VPS13B-204ENST00000441350 SCD5Q86SK9 330 aa22.09■■□□□ 1.13
VPS13B-204ENST00000441350 MON1AQ86VX9 555 aa22.09■■□□□ 1.13
VPS13B-204ENST00000441350 NIPA2Q8N8Q9 360 aa22.09■■□□□ 1.13
VPS13B-204ENST00000441350 MYRFLQ96LU7 910 aa22.09■■□□□ 1.13
VPS13B-204ENST00000441350 PLEKHA4Q9H4M7 779 aa22.09■■□□□ 1.13
VPS13B-204ENST00000441350 POPDC2Q9HBU9 364 aa22.09■■□□□ 1.13
VPS13B-204ENST00000441350 EHD2Q9NZN4 543 aa22.09■■□□□ 1.13
VPS13B-204ENST00000441350 ALG6Q9Y672 507 aa22.09■■□□□ 1.13
VPS13B-204ENST00000441350 MYO9BQ13459 2157 aa22.09■■□□□ 1.13
VPS13B-204ENST00000441350 DPYSL4O14531 572 aa22.08■■□□□ 1.13
VPS13B-204ENST00000441350 FANCGO15287 622 aa22.08■■□□□ 1.13
VPS13B-204ENST00000441350 PDGFRAP16234 1089 aa22.08■■□□□ 1.13
VPS13B-204ENST00000441350 MAN1A1P33908 653 aa22.08■■□□□ 1.13
VPS13B-204ENST00000441350 MATKP42679 507 aa22.08■■□□□ 1.13
VPS13B-204ENST00000441350 PGFP49763 221 aa22.08■■□□□ 1.13
VPS13B-204ENST00000441350 EPHB3P54753 998 aa22.08■■□□□ 1.13
VPS13B-204ENST00000441350 PIGHQ14442 188 aaPredicted RBP22.08■■□□□ 1.13
VPS13B-204ENST00000441350 VEPH1Q14D04 833 aa22.08■■□□□ 1.13
VPS13B-204ENST00000441350 BSPRYQ5W0U4 402 aa22.08■■□□□ 1.13
VPS13B-204ENST00000441350 BEND5Q7L4P6 421 aa22.08■■□□□ 1.13
VPS13B-204ENST00000441350 DEFB106AQ8N104 65 aa22.08■■□□□ 1.13
VPS13B-204ENST00000441350 HDAC7Q8WUI4 952 aa22.08■■□□□ 1.13
VPS13B-204ENST00000441350 TRMT2BQ96GJ1 504 aaKnown RBP22.08■■□□□ 1.13
VPS13B-204ENST00000441350 CNPY3Q9BT09 278 aa22.08■■□□□ 1.13
VPS13B-204ENST00000441350 DDX23Q9BUQ8 820 aaKnown RBP22.08■■□□□ 1.13
VPS13B-204ENST00000441350 TLE6Q9H808 572 aa22.08■■□□□ 1.13
VPS13B-204ENST00000441350 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.08■■□□□ 1.136e-7■□□□□ 8.7
VPS13B-204ENST00000441350 TRIOBPQ9H2D6 2365 aa22.07■■□□□ 1.12
VPS13B-204ENST00000441350 TMEM110-MUSTN1A8MSY1 372 aa22.07■■□□□ 1.12
VPS13B-204ENST00000441350 EPCAMP16422 314 aa22.07■■□□□ 1.12
VPS13B-204ENST00000441350 YWHAGP61981 247 aaKnown RBP eCLIP22.07■■□□□ 1.12
VPS13B-204ENST00000441350 TAF10Q12962 218 aa22.07■■□□□ 1.12
VPS13B-204ENST00000441350 DUSP6Q16828 381 aa22.07■■□□□ 1.12
VPS13B-204ENST00000441350 CCDC14Q49A88 953 aa22.07■■□□□ 1.12
VPS13B-204ENST00000441350 SYT10Q6XYQ8 523 aa22.07■■□□□ 1.12
VPS13B-204ENST00000441350 DNAJB7Q7Z6W7 309 aaPredicted RBP22.07■■□□□ 1.12
VPS13B-204ENST00000441350 NT5DC3Q86UY8 548 aa22.07■■□□□ 1.12
VPS13B-204ENST00000441350 FBXO32Q969P5 355 aa22.07■■□□□ 1.12
VPS13B-204ENST00000441350 PSMG2Q969U7 264 aa22.07■■□□□ 1.12
VPS13B-204ENST00000441350 NMUR1Q9HB89 426 aa22.07■■□□□ 1.12
VPS13B-204ENST00000441350 MAN1C1Q9NR34 630 aa22.07■■□□□ 1.12
VPS13B-204ENST00000441350 GMIPQ9P107 970 aa22.07■■□□□ 1.12
VPS13B-204ENST00000441350 ASB3Q9Y575 518 aa22.07■■□□□ 1.12
VPS13B-204ENST00000441350 TNNT1P13805 278 aa22.06■■□□□ 1.12
VPS13B-204ENST00000441350 COMTP21964 271 aa22.06■■□□□ 1.12
VPS13B-204ENST00000441350 PSMA2P25787 234 aa22.06■■□□□ 1.12
VPS13B-204ENST00000441350 NOS2P35228 1153 aa22.06■■□□□ 1.12
VPS13B-204ENST00000441350 PTPN9P43378 593 aa22.06■■□□□ 1.12
VPS13B-204ENST00000441350 ACAP1Q15027 740 aa22.06■■□□□ 1.12
VPS13B-204ENST00000441350 RBM23Q86U06 439 aaKnown RBP22.06■■□□□ 1.12
VPS13B-204ENST00000441350 CPNE8Q86YQ8 564 aa22.06■■□□□ 1.12
VPS13B-204ENST00000441350 ARHGAP18Q8N392 663 aa22.06■■□□□ 1.12
VPS13B-204ENST00000441350 GOLGA1Q92805 767 aa22.06■■□□□ 1.12
VPS13B-204ENST00000441350 NT5C3BQ969T7 300 aa22.06■■□□□ 1.12
VPS13B-204ENST00000441350 TRIM62Q9BVG3 475 aa22.06■■□□□ 1.12
VPS13B-204ENST00000441350 DNAI1Q9UI46 699 aa22.06■■□□□ 1.12
VPS13B-204ENST00000441350 MAGED2Q9UNF1 606 aaPredicted RBP22.06■■□□□ 1.12
VPS13B-204ENST00000441350 NAALADL1Q9UQQ1 740 aa22.06■■□□□ 1.12
VPS13B-204ENST00000441350 HCFC2Q9Y5Z7 792 aa22.06■■□□□ 1.12
VPS13B-204ENST00000441350 TMEM265A0A087WTH1 108 aa22.06■■□□□ 1.12
VPS13B-204ENST00000441350 A0A1W2PQH9 124 aa22.06■■□□□ 1.12
VPS13B-204ENST00000441350 ZMYND10O75800 440 aa22.06■■□□□ 1.12
VPS13B-204ENST00000441350 FTCDO95954 541 aa22.06■■□□□ 1.12
VPS13B-204ENST00000441350 LRG1P02750 347 aa22.06■■□□□ 1.12
VPS13B-204ENST00000441350 ZDHHC11BP0C7U3 371 aa22.06■■□□□ 1.12
VPS13B-204ENST00000441350 SDC4P31431 198 aa22.06■■□□□ 1.12
VPS13B-204ENST00000441350 SLC1A1P43005 524 aa22.06■■□□□ 1.12
VPS13B-204ENST00000441350 DCAF6Q58WW2 860 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms