RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 ADAMTS3O15072 1205 aa4.35□□□□□ -1.71
TRAPPC13-204ENST00000438419 COQ9O75208 318 aa4.35□□□□□ -1.71
TRAPPC13-204ENST00000438419 TJP3O95049 919 aa4.35□□□□□ -1.71
TRAPPC13-204ENST00000438419 CD19P15391 556 aa4.35□□□□□ -1.71
TRAPPC13-204ENST00000438419 GABRB3P28472 473 aa4.35□□□□□ -1.71
TRAPPC13-204ENST00000438419 RBL1P28749 1068 aa4.35□□□□□ -1.71
TRAPPC13-204ENST00000438419 SLC5A2P31639 672 aa4.35□□□□□ -1.71
TRAPPC13-204ENST00000438419 ATICP31939 592 aa4.35□□□□□ -1.71
TRAPPC13-204ENST00000438419 PPM1AP35813 382 aa4.35□□□□□ -1.71
TRAPPC13-204ENST00000438419 TECP42680 631 aa4.35□□□□□ -1.71
TRAPPC13-204ENST00000438419 CCT8P50990 548 aa4.35□□□□□ -1.71
TRAPPC13-204ENST00000438419 SOX10P56693 466 aa4.35□□□□□ -1.71
TRAPPC13-204ENST00000438419 FAM153CQ494X1 144 aa4.35□□□□□ -1.71
TRAPPC13-204ENST00000438419 FAXCQ5TGI0 409 aa4.35□□□□□ -1.71
TRAPPC13-204ENST00000438419 STRIP1Q5VSL9 837 aa4.35□□□□□ -1.71
TRAPPC13-204ENST00000438419 FBXO42Q6P3S6 717 aa4.35□□□□□ -1.71
TRAPPC13-204ENST00000438419 PARS2Q7L3T8 475 aaKnown RBP4.35□□□□□ -1.71
TRAPPC13-204ENST00000438419 ZNF804AQ7Z570 1209 aa4.35□□□□□ -1.71
TRAPPC13-204ENST00000438419 MBD3L2Q8NHZ7 208 aaPredicted RBP4.35□□□□□ -1.71
TRAPPC13-204ENST00000438419 HIST1H2AAQ96QV6 131 aa4.35□□□□□ -1.71
TRAPPC13-204ENST00000438419 HAPLN3Q96S86 360 aa4.35□□□□□ -1.71
TRAPPC13-204ENST00000438419 TIMP4Q99727 224 aa4.35□□□□□ -1.71
TRAPPC13-204ENST00000438419 GDF15Q99988 308 aa4.35□□□□□ -1.71
TRAPPC13-204ENST00000438419 STK33Q9BYT3 514 aa4.35□□□□□ -1.71
TRAPPC13-204ENST00000438419 NECTIN3Q9NQS3 549 aa4.35□□□□□ -1.71
TRAPPC13-204ENST00000438419 RGL1Q9NZL6 768 aa4.35□□□□□ -1.71
TRAPPC13-204ENST00000438419 CCNL1Q9UK58 526 aaPredicted RBP4.35□□□□□ -1.71
TRAPPC13-204ENST00000438419 LRCH1Q9Y2L9 728 aa4.35□□□□□ -1.71
TRAPPC13-204ENST00000438419 ENTPD2Q9Y5L3 495 aa4.35□□□□□ -1.71
TRAPPC13-204ENST00000438419 ABHD14A-ACY1A0A1B0GW23 586 aa4.34□□□□□ -1.71
TRAPPC13-204ENST00000438419 FAM234BA2RU67 622 aa4.34□□□□□ -1.71
TRAPPC13-204ENST00000438419 QSOX1O00391 747 aa4.34□□□□□ -1.71
TRAPPC13-204ENST00000438419 PODXLO00592 558 aa4.34□□□□□ -1.71
TRAPPC13-204ENST00000438419 CCNT2O60583 730 aaKnown RBP4.34□□□□□ -1.71
TRAPPC13-204ENST00000438419 EIF3JO75822 258 aaKnown RBP4.34□□□□□ -1.71
TRAPPC13-204ENST00000438419 VNN1O95497 513 aa4.34□□□□□ -1.71
TRAPPC13-204ENST00000438419 NDST3O95803 873 aa4.34□□□□□ -1.71
TRAPPC13-204ENST00000438419 NPSP0C0P6 89 aa4.34□□□□□ -1.71
TRAPPC13-204ENST00000438419 EGR1P18146 543 aa4.34□□□□□ -1.71
TRAPPC13-204ENST00000438419 CYP2C18P33260 490 aa4.34□□□□□ -1.71
TRAPPC13-204ENST00000438419 EEFSECP57772 596 aaKnown RBP4.34□□□□□ -1.71
TRAPPC13-204ENST00000438419 SUMO2P61956 95 aaKnown RBP4.34□□□□□ -1.71
TRAPPC13-204ENST00000438419 GPS1Q13098 491 aa4.34□□□□□ -1.71
TRAPPC13-204ENST00000438419 GRM1Q13255 1194 aa4.34□□□□□ -1.71
TRAPPC13-204ENST00000438419 STARD3Q14849 445 aa4.34□□□□□ -1.71
TRAPPC13-204ENST00000438419 CLCA4Q14CN2 919 aa4.34□□□□□ -1.71
TRAPPC13-204ENST00000438419 SLC5A9Q2M3M2 681 aa4.34□□□□□ -1.71
TRAPPC13-204ENST00000438419 TBC1D25Q3MII6 688 aa4.34□□□□□ -1.71
TRAPPC13-204ENST00000438419 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.34□□□□□ -1.71
TRAPPC13-204ENST00000438419 AARS2Q5JTZ9 985 aaKnown RBP4.34□□□□□ -1.71
TRAPPC13-204ENST00000438419 ARL6IP4Q66PJ3 421 aaKnown RBP4.34□□□□□ -1.71
TRAPPC13-204ENST00000438419 C1orf228Q6PIY5 440 aa4.34□□□□□ -1.71
TRAPPC13-204ENST00000438419 KIAA0408Q6ZU52 694 aa4.34□□□□□ -1.71
TRAPPC13-204ENST00000438419 Q6ZWC4 215 aa4.34□□□□□ -1.71
TRAPPC13-204ENST00000438419 ADGRG3Q86Y34 549 aa4.34□□□□□ -1.71
TRAPPC13-204ENST00000438419 CCDC28AQ8IWP9 274 aa4.34□□□□□ -1.71
TRAPPC13-204ENST00000438419 DNAJC10Q8IXB1 793 aa4.34□□□□□ -1.71
TRAPPC13-204ENST00000438419 SMC5Q8IY18 1101 aa4.34□□□□□ -1.71
TRAPPC13-204ENST00000438419 SYTL1Q8IYJ3 562 aa4.34□□□□□ -1.71
TRAPPC13-204ENST00000438419 NTN5Q8WTR8 489 aaPredicted RBP4.34□□□□□ -1.71
TRAPPC13-204ENST00000438419 TBC1D5Q92609 795 aa4.34□□□□□ -1.71
TRAPPC13-204ENST00000438419 TMEM41AQ96HV5 264 aa4.34□□□□□ -1.71
TRAPPC13-204ENST00000438419 ZBTB45Q96K62 511 aaPredicted RBP4.34□□□□□ -1.71
TRAPPC13-204ENST00000438419 UROC1Q96N76 676 aa4.34□□□□□ -1.71
TRAPPC13-204ENST00000438419 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.34□□□□□ -1.71
TRAPPC13-204ENST00000438419 PLCB1Q9NQ66 1216 aa4.34□□□□□ -1.71
TRAPPC13-204ENST00000438419 DUSP22Q9NRW4 184 aa4.34□□□□□ -1.71
TRAPPC13-204ENST00000438419 ASB6Q9NWX5 421 aa4.34□□□□□ -1.71
TRAPPC13-204ENST00000438419 DLL3Q9NYJ7 618 aa4.34□□□□□ -1.71
TRAPPC13-204ENST00000438419 STEAP1Q9UHE8 339 aa4.34□□□□□ -1.71
TRAPPC13-204ENST00000438419 ADAM21Q9UKJ8 722 aa4.34□□□□□ -1.71
TRAPPC13-204ENST00000438419 RIMKLBQ9ULI2 386 aa4.34□□□□□ -1.71
TRAPPC13-204ENST00000438419 POLR2AP24928 1970 aaKnown RBP4.34□□□□□ -1.72
TRAPPC13-204ENST00000438419 FER1L4A9Z1Z3 1794 aa4.33□□□□□ -1.72
TRAPPC13-204ENST00000438419 LRRC3CA6NJW4 275 aa4.33□□□□□ -1.72
TRAPPC13-204ENST00000438419 H0YIZ8 118 aa4.33□□□□□ -1.72
TRAPPC13-204ENST00000438419 EXOC5O00471 708 aa4.33□□□□□ -1.72
TRAPPC13-204ENST00000438419 PLA2G6O60733 806 aa4.33□□□□□ -1.72
TRAPPC13-204ENST00000438419 IGLV2-14P01704 120 aa4.33□□□□□ -1.72
TRAPPC13-204ENST00000438419 WT1P19544 449 aaPredicted RBP4.33□□□□□ -1.72
TRAPPC13-204ENST00000438419 DRD4P21917 467 aa4.33□□□□□ -1.72
TRAPPC13-204ENST00000438419 MST1P26927 711 aa4.33□□□□□ -1.72
TRAPPC13-204ENST00000438419 CTGFP29279 349 aa4.33□□□□□ -1.72
TRAPPC13-204ENST00000438419 GKP32189 559 aa4.33□□□□□ -1.72
TRAPPC13-204ENST00000438419 TNFAIP2Q03169 654 aa4.33□□□□□ -1.72
TRAPPC13-204ENST00000438419 MAPKAPK3Q16644 382 aa4.33□□□□□ -1.72
TRAPPC13-204ENST00000438419 ST3GAL2Q16842 350 aa4.33□□□□□ -1.72
TRAPPC13-204ENST00000438419 DENND2CQ68D51 928 aa4.33□□□□□ -1.72
TRAPPC13-204ENST00000438419 ARHGEF25Q86VW2 580 aa4.33□□□□□ -1.72
TRAPPC13-204ENST00000438419 SIRT6Q8N6T7 355 aa4.33□□□□□ -1.72
TRAPPC13-204ENST00000438419 BOLLQ8N9W6 283 aaKnown RBP4.33□□□□□ -1.72
TRAPPC13-204ENST00000438419 GLIS1Q8NBF1 620 aa4.33□□□□□ -1.72
TRAPPC13-204ENST00000438419 ABHD11Q8NFV4 315 aa4.33□□□□□ -1.72
TRAPPC13-204ENST00000438419 ABHD5Q8WTS1 349 aa4.33□□□□□ -1.72
TRAPPC13-204ENST00000438419 TTLL2Q9BWV7 592 aa4.33□□□□□ -1.72
TRAPPC13-204ENST00000438419 FSD1LQ9BXM9 530 aa4.33□□□□□ -1.72
TRAPPC13-204ENST00000438419 PCDHAC1Q9H158 963 aa4.33□□□□□ -1.72
TRAPPC13-204ENST00000438419 ARPP21Q9UBL0 812 aaPredicted RBP4.33□□□□□ -1.72
TRAPPC13-204ENST00000438419 NKX1-2Q9UD57 310 aaPredicted RBP4.33□□□□□ -1.72
TRAPPC13-204ENST00000438419 SLC39A10Q9ULF5 831 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms