RNA–Protein interactions for RNA: ENST00000428082.6

TVP23C-203, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-203ENST00000428082 TMEM120BA0PK00 339 aa16.41■□□□□ 0.22
TVP23C-203ENST00000428082 DNALI1O14645 258 aaPredicted RBP16.41■□□□□ 0.22
TVP23C-203ENST00000428082 UPP2O95045 317 aa16.41■□□□□ 0.22
TVP23C-203ENST00000428082 CFHP08603 1231 aa16.41■□□□□ 0.22
TVP23C-203ENST00000428082 SCTRP47872 440 aa16.41■□□□□ 0.22
TVP23C-203ENST00000428082 GRIK3Q13003 919 aa16.41■□□□□ 0.22
TVP23C-203ENST00000428082 NOMO2Q5JPE7 1267 aa16.41■□□□□ 0.22
TVP23C-203ENST00000428082 LLGL2Q6P1M3 1020 aa16.41■□□□□ 0.22
TVP23C-203ENST00000428082 POLNQ7Z5Q5 900 aa16.41■□□□□ 0.22
TVP23C-203ENST00000428082 PCGF5Q86SE9 256 aa16.41■□□□□ 0.22
TVP23C-203ENST00000428082 ERICH1Q86X53 443 aa16.41■□□□□ 0.22
TVP23C-203ENST00000428082 NPAS4Q8IUM7 802 aa16.41■□□□□ 0.22
TVP23C-203ENST00000428082 CISHQ9NSE2 258 aa16.41■□□□□ 0.22
TVP23C-203ENST00000428082 ZNF148Q9UQR1 794 aa16.41■□□□□ 0.22
TVP23C-203ENST00000428082 PIRO00625 290 aa16.4■□□□□ 0.22
TVP23C-203ENST00000428082 RASSF9O75901 435 aa16.4■□□□□ 0.22
TVP23C-203ENST00000428082 GJC1P36383 396 aa16.4■□□□□ 0.22
TVP23C-203ENST00000428082 MAGEA4P43358 317 aa16.4■□□□□ 0.22
TVP23C-203ENST00000428082 WDR5P61964 334 aaKnown RBP16.4■□□□□ 0.22
TVP23C-203ENST00000428082 DEFB103AP81534 67 aa16.4■□□□□ 0.22
TVP23C-203ENST00000428082 PPARDQ03181 441 aa16.4■□□□□ 0.22
TVP23C-203ENST00000428082 MORF4L2Q15014 288 aa16.4■□□□□ 0.22
TVP23C-203ENST00000428082 P3H1Q32P28 736 aa16.4■□□□□ 0.22
TVP23C-203ENST00000428082 TFDP3Q5H9I0 405 aa16.4■□□□□ 0.22
TVP23C-203ENST00000428082 SPOCD1Q6ZMY3 1216 aa16.4■□□□□ 0.22
TVP23C-203ENST00000428082 TMCO2Q7Z6W1 182 aaPredicted RBP16.4■□□□□ 0.22
TVP23C-203ENST00000428082 GBP7Q8N8V2 638 aaPredicted RBP16.4■□□□□ 0.22
TVP23C-203ENST00000428082 TTC13Q8NBP0 860 aa16.4■□□□□ 0.22
TVP23C-203ENST00000428082 HPDLQ96IR7 371 aa16.4■□□□□ 0.22
TVP23C-203ENST00000428082 CASD1Q96PB1 797 aa16.4■□□□□ 0.22
TVP23C-203ENST00000428082 KLC4Q9NSK0 619 aa16.4■□□□□ 0.22
TVP23C-203ENST00000428082 TPX2Q9ULW0 747 aaKnown RBP16.4■□□□□ 0.22
TVP23C-203ENST00000428082 PTPRSQ13332 1948 aa16.4■□□□□ 0.22
TVP23C-203ENST00000428082 TCRBV5S1A1TA0A578 114 aa16.39■□□□□ 0.21
TVP23C-203ENST00000428082 CASTOR2A6NHX0 329 aa16.39■□□□□ 0.21
TVP23C-203ENST00000428082 B4GALT3O60512 393 aa16.39■□□□□ 0.21
TVP23C-203ENST00000428082 SUN1O94901 812 aa16.39■□□□□ 0.21
TVP23C-203ENST00000428082 BRAFP15056 766 aa16.39■□□□□ 0.21
TVP23C-203ENST00000428082 IGFBP6P24592 240 aaPredicted RBP16.39■□□□□ 0.21
TVP23C-203ENST00000428082 LRPAP1P30533 357 aa16.39■□□□□ 0.21
TVP23C-203ENST00000428082 ATICP31939 592 aa16.39■□□□□ 0.21
TVP23C-203ENST00000428082 VPS41P49754 854 aa16.39■□□□□ 0.21
TVP23C-203ENST00000428082 XRCC4Q13426 336 aa16.39■□□□□ 0.21
TVP23C-203ENST00000428082 WDR72Q3MJ13 1102 aa16.39■□□□□ 0.21
TVP23C-203ENST00000428082 UBAP2Q5T6F2 1119 aaKnown RBP16.39■□□□□ 0.21
TVP23C-203ENST00000428082 ABI1Q8IZP0 508 aa16.39■□□□□ 0.21
TVP23C-203ENST00000428082 ALLCQ8N6M5 410 aa16.39■□□□□ 0.21
TVP23C-203ENST00000428082 CKAP2Q8WWK9 683 aa16.39■□□□□ 0.21
TVP23C-203ENST00000428082 NKD2Q969F2 451 aaPredicted RBP16.39■□□□□ 0.21
TVP23C-203ENST00000428082 MCEEQ96PE7 176 aa16.39■□□□□ 0.21
TVP23C-203ENST00000428082 RBM15Q96T37 977 aaKnown RBP eCLIP16.39■□□□□ 0.21
TVP23C-203ENST00000428082 ELAC2Q9BQ52 826 aaKnown RBP16.39■□□□□ 0.21
TVP23C-203ENST00000428082 PAAF1Q9BRP4 392 aa16.39■□□□□ 0.21
TVP23C-203ENST00000428082 PHACTR1Q9C0D0 580 aa16.39■□□□□ 0.21
TVP23C-203ENST00000428082 LHX5Q9H2C1 402 aa16.39■□□□□ 0.21
TVP23C-203ENST00000428082 SLC40A1Q9NP59 571 aa16.39■□□□□ 0.21
TVP23C-203ENST00000428082 KCNK9Q9NPC2 374 aa16.39■□□□□ 0.21
TVP23C-203ENST00000428082 TBC1D13Q9NVG8 400 aa16.39■□□□□ 0.21
TVP23C-203ENST00000428082 WDR35Q9P2L0 1181 aa16.39■□□□□ 0.21
TVP23C-203ENST00000428082 NXF1Q9UBU9 619 aaKnown RBP16.39■□□□□ 0.21
TVP23C-203ENST00000428082 POLIQ9UNA4 740 aa16.39■□□□□ 0.21
TVP23C-203ENST00000428082 DDHD2O94830 711 aa16.39■□□□□ 0.21
TVP23C-203ENST00000428082 FGBP02675 491 aa16.39■□□□□ 0.21
TVP23C-203ENST00000428082 ITGAVP06756 1048 aa16.39■□□□□ 0.21
TVP23C-203ENST00000428082 KRT7P08729 469 aa16.39■□□□□ 0.21
TVP23C-203ENST00000428082 IFNAR2P48551 515 aa16.39■□□□□ 0.21
TVP23C-203ENST00000428082 CLCNKBP51801 687 aa16.39■□□□□ 0.21
TVP23C-203ENST00000428082 TUSC3Q13454 348 aa16.39■□□□□ 0.21
TVP23C-203ENST00000428082 HADHQ16836 314 aaKnown RBP16.39■□□□□ 0.21
TVP23C-203ENST00000428082 CCDC38Q502W7 563 aa16.39■□□□□ 0.21
TVP23C-203ENST00000428082 SWT1Q5T5J6 900 aaKnown RBP16.39■□□□□ 0.21
TVP23C-203ENST00000428082 ANKS1BQ7Z6G8 1248 aa16.39■□□□□ 0.21
TVP23C-203ENST00000428082 ZNF280BQ86YH2 543 aa16.39■□□□□ 0.21
TVP23C-203ENST00000428082 TDRPQ86YL5 185 aa16.39■□□□□ 0.21
TVP23C-203ENST00000428082 LRRC52Q8N7C0 313 aa16.39■□□□□ 0.21
TVP23C-203ENST00000428082 URGCPQ8TCY9 931 aa16.39■□□□□ 0.21
TVP23C-203ENST00000428082 TOP1MTQ969P6 601 aa16.39■□□□□ 0.21
TVP23C-203ENST00000428082 GRAMD1AQ96CP6 724 aa16.39■□□□□ 0.21
TVP23C-203ENST00000428082 SGSM3Q96HU1 749 aa16.39■□□□□ 0.21
TVP23C-203ENST00000428082 VRTNQ9H8Y1 702 aa16.39■□□□□ 0.21
TVP23C-203ENST00000428082 SENP1Q9P0U3 644 aa16.39■□□□□ 0.21
TVP23C-203ENST00000428082 USP15Q9Y4E8 981 aaPredicted RBP16.39■□□□□ 0.21
TVP23C-203ENST00000428082 SMAPO00193 183 aa16.38■□□□□ 0.21
TVP23C-203ENST00000428082 O00370 1275 aa16.38■□□□□ 0.21
TVP23C-203ENST00000428082 SNX3O60493 162 aa16.38■□□□□ 0.21
TVP23C-203ENST00000428082 EFCAB14O75071 495 aa16.38■□□□□ 0.21
TVP23C-203ENST00000428082 BAIAP3O94812 1187 aa16.38■□□□□ 0.21
TVP23C-203ENST00000428082 AMHP03971 560 aa16.38■□□□□ 0.21
TVP23C-203ENST00000428082 STX2P32856 288 aa16.38■□□□□ 0.21
TVP23C-203ENST00000428082 VCPP55072 806 aaKnown RBP16.38■□□□□ 0.21
TVP23C-203ENST00000428082 RPL7AP62424 266 aaKnown RBP16.38■□□□□ 0.21
TVP23C-203ENST00000428082 MYO1EQ12965 1108 aa16.38■□□□□ 0.21
TVP23C-203ENST00000428082 ZNF667Q5HYK9 610 aa16.38■□□□□ 0.21
TVP23C-203ENST00000428082 PPP1R15BQ5SWA1 713 aa16.38■□□□□ 0.21
TVP23C-203ENST00000428082 VSTM1Q6UX27 236 aa16.38■□□□□ 0.21
TVP23C-203ENST00000428082 MFSD7Q6UXD7 560 aa16.38■□□□□ 0.21
TVP23C-203ENST00000428082 SCARA5Q6ZMJ2 495 aa16.38■□□□□ 0.21
TVP23C-203ENST00000428082 TRPM8Q7Z2W7 1104 aa16.38■□□□□ 0.21
TVP23C-203ENST00000428082 FNIP1Q8TF40 1166 aa16.38■□□□□ 0.21
TVP23C-203ENST00000428082 SHOC2Q9UQ13 582 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms