RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 LRRC37AA6NMS7 1700 aa13.93□□□□□ -0.18
COL6A2-204ENST00000409416 LPXNO60711 386 aa13.93□□□□□ -0.18
COL6A2-204ENST00000409416 DESP17661 470 aa13.93□□□□□ -0.18
COL6A2-204ENST00000409416 TPH1P17752 444 aa13.93□□□□□ -0.18
COL6A2-204ENST00000409416 AMPD1P23109 780 aa13.93□□□□□ -0.18
COL6A2-204ENST00000409416 GRIA1P42261 906 aa13.93□□□□□ -0.18
COL6A2-204ENST00000409416 ROR1Q01973 937 aa13.93□□□□□ -0.18
COL6A2-204ENST00000409416 FKBP1CQ5VVH2 108 aa13.93□□□□□ -0.18
COL6A2-204ENST00000409416 LBX2Q6XYB7 198 aa13.93□□□□□ -0.18
COL6A2-204ENST00000409416 ATP11CQ8NB49 1132 aa13.93□□□□□ -0.18
COL6A2-204ENST00000409416 MOCOSQ96EN8 888 aa13.93□□□□□ -0.18
COL6A2-204ENST00000409416 ZNF570Q96NI8 536 aa13.93□□□□□ -0.18
COL6A2-204ENST00000409416 MRPL45Q9BRJ2 306 aaKnown RBP13.93□□□□□ -0.18
COL6A2-204ENST00000409416 VPS11Q9H270 941 aa13.93□□□□□ -0.18
COL6A2-204ENST00000409416 SMARCAD1Q9H4L7 1026 aa13.93□□□□□ -0.18
COL6A2-204ENST00000409416 ERAP1Q9NZ08 941 aa13.93□□□□□ -0.18
COL6A2-204ENST00000409416 RBPJLQ9UBG7 517 aa13.93□□□□□ -0.18
COL6A2-204ENST00000409416 DOCK5Q9H7D0 1870 aa13.93□□□□□ -0.18
COL6A2-204ENST00000409416 CASTOR2A6NHX0 329 aa13.92□□□□□ -0.18
COL6A2-204ENST00000409416 UGT1A9O60656 530 aa13.92□□□□□ -0.18
COL6A2-204ENST00000409416 LGALS2P05162 132 aa13.92□□□□□ -0.18
COL6A2-204ENST00000409416 CYP2C9P11712 490 aa13.92□□□□□ -0.18
COL6A2-204ENST00000409416 ARL1P40616 181 aaPredicted RBP13.92□□□□□ -0.18
COL6A2-204ENST00000409416 ITKQ08881 620 aa13.92□□□□□ -0.18
COL6A2-204ENST00000409416 MORF4L2Q15014 288 aa13.92□□□□□ -0.18
COL6A2-204ENST00000409416 RNF43Q68DV7 783 aa13.92□□□□□ -0.18
COL6A2-204ENST00000409416 ANKRD13AQ8IZ07 590 aa13.92□□□□□ -0.18
COL6A2-204ENST00000409416 ARMC2Q8NEN0 867 aa13.92□□□□□ -0.18
COL6A2-204ENST00000409416 GPR20Q99678 358 aa13.92□□□□□ -0.18
COL6A2-204ENST00000409416 UGT1A7Q9HAW7 530 aa13.92□□□□□ -0.18
COL6A2-204ENST00000409416 UGT1A10Q9HAW8 530 aa13.92□□□□□ -0.18
COL6A2-204ENST00000409416 UGT1A8Q9HAW9 530 aa13.92□□□□□ -0.18
COL6A2-204ENST00000409416 CYP4F11Q9HBI6 524 aa13.92□□□□□ -0.18
COL6A2-204ENST00000409416 HEY2Q9UBP5 337 aa13.92□□□□□ -0.18
COL6A2-204ENST00000409416 ZMYND8Q9ULU4 1186 aaPredicted RBP13.92□□□□□ -0.18
COL6A2-204ENST00000409416 SMG5Q9UPR3 1016 aaKnown RBP13.92□□□□□ -0.18
COL6A2-204ENST00000409416 CCDC189A1A4V9 331 aa13.92□□□□□ -0.18
COL6A2-204ENST00000409416 PDHXO00330 501 aa13.92□□□□□ -0.18
COL6A2-204ENST00000409416 AP1G2O75843 785 aa13.92□□□□□ -0.18
COL6A2-204ENST00000409416 GCAP28676 217 aa13.92□□□□□ -0.18
COL6A2-204ENST00000409416 NR1H3Q13133 447 aa13.92□□□□□ -0.18
COL6A2-204ENST00000409416 CA9Q16790 459 aa13.92□□□□□ -0.18
COL6A2-204ENST00000409416 MUM1Q2TAK8 710 aa13.92□□□□□ -0.18
COL6A2-204ENST00000409416 PPP1R26Q5T8A7 1209 aaPredicted RBP13.92□□□□□ -0.18
COL6A2-204ENST00000409416 ANKLE1Q8NAG6 615 aa13.92□□□□□ -0.18
COL6A2-204ENST00000409416 FBXO6Q9NRD1 293 aaPredicted RBP13.92□□□□□ -0.18
COL6A2-204ENST00000409416 SNX10Q9Y5X0 201 aa13.92□□□□□ -0.18
COL6A2-204ENST00000409416 MAFGO15525 162 aa13.92□□□□□ -0.18
COL6A2-204ENST00000409416 LRCH4O75427 683 aa13.92□□□□□ -0.18
COL6A2-204ENST00000409416 ASS1P00966 412 aaKnown RBP13.92□□□□□ -0.18
COL6A2-204ENST00000409416 PYGBP11216 843 aa13.92□□□□□ -0.18
COL6A2-204ENST00000409416 TMPRSS15P98073 1019 aa13.92□□□□□ -0.18
COL6A2-204ENST00000409416 MXD4Q14582 209 aaPredicted RBP13.92□□□□□ -0.18
COL6A2-204ENST00000409416 RNASEH2BQ5TBB1 312 aaKnown RBP13.92□□□□□ -0.18
COL6A2-204ENST00000409416 RSPH3Q86UC2 560 aa13.92□□□□□ -0.18
COL6A2-204ENST00000409416 CHST13Q8NET6 341 aa13.92□□□□□ -0.18
COL6A2-204ENST00000409416 CELF6Q96J87 481 aaKnown RBP13.92□□□□□ -0.18
COL6A2-204ENST00000409416 YIPF3Q9GZM5 350 aa13.92□□□□□ -0.18
COL6A2-204ENST00000409416 LRRC4Q9HBW1 653 aa13.92□□□□□ -0.18
COL6A2-204ENST00000409416 SPATS2LQ9NUQ6 558 aaKnown RBP13.92□□□□□ -0.18
COL6A2-204ENST00000409416 PRKAG3Q9UGI9 489 aa13.92□□□□□ -0.18
COL6A2-204ENST00000409416 COL11A2P13942 1736 aaPredicted RBP13.91□□□□□ -0.18
COL6A2-204ENST00000409416 THSD7AQ9UPZ6 1657 aa13.91□□□□□ -0.18
COL6A2-204ENST00000409416 QSER1Q2KHR3 1735 aa13.91□□□□□ -0.18
COL6A2-204ENST00000409416 KBTBD13C9JR72 458 aa13.91□□□□□ -0.18
COL6A2-204ENST00000409416 EDF1O60869 148 aaKnown RBP13.91□□□□□ -0.18
COL6A2-204ENST00000409416 BGNP21810 368 aa13.91□□□□□ -0.18
COL6A2-204ENST00000409416 IGFBP6P24592 240 aaPredicted RBP13.91□□□□□ -0.18
COL6A2-204ENST00000409416 RPS12P25398 132 aaKnown RBP13.91□□□□□ -0.18
COL6A2-204ENST00000409416 RPL22P35268 128 aaKnown RBP13.91□□□□□ -0.18
COL6A2-204ENST00000409416 CDKN2BP42772 138 aa13.91□□□□□ -0.18
COL6A2-204ENST00000409416 EFNA5P52803 228 aa13.91□□□□□ -0.18
COL6A2-204ENST00000409416 GPX6P59796 221 aa13.91□□□□□ -0.18
COL6A2-204ENST00000409416 PDK4Q16654 411 aa13.91□□□□□ -0.18
COL6A2-204ENST00000409416 C15orf39Q6ZRI6 1047 aa13.91□□□□□ -0.18
COL6A2-204ENST00000409416 MAGEC3Q8TD91 643 aa13.91□□□□□ -0.18
COL6A2-204ENST00000409416 BHMTQ93088 406 aa13.91□□□□□ -0.18
COL6A2-204ENST00000409416 RNF39Q9H2S5 420 aa13.91□□□□□ -0.18
COL6A2-204ENST00000409416 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.91□□□□□ -0.18
COL6A2-204ENST00000409416 MYH9P35579 1960 aaKnown RBP13.91□□□□□ -0.18
COL6A2-204ENST00000409416 MSCO60682 206 aa13.91□□□□□ -0.18
COL6A2-204ENST00000409416 HMBSP08397 361 aa13.91□□□□□ -0.18
COL6A2-204ENST00000409416 FGFR1P11362 822 aa13.91□□□□□ -0.18
COL6A2-204ENST00000409416 LMO2P25791 158 aa13.91□□□□□ -0.18
COL6A2-204ENST00000409416 YWHAEP62258 255 aaKnown RBP13.91□□□□□ -0.18
COL6A2-204ENST00000409416 PTK7Q13308 1070 aa13.91□□□□□ -0.18
COL6A2-204ENST00000409416 PIGHQ14442 188 aaPredicted RBP13.91□□□□□ -0.18
COL6A2-204ENST00000409416 FAM183BPQ6ZVS7 135 aa13.91□□□□□ -0.18
COL6A2-204ENST00000409416 RNF135Q8IUD6 432 aa13.91□□□□□ -0.18
COL6A2-204ENST00000409416 SCN4BQ8IWT1 228 aa13.91□□□□□ -0.18
COL6A2-204ENST00000409416 HOMEZQ8IX15 550 aa13.91□□□□□ -0.18
COL6A2-204ENST00000409416 PPIL6Q8IXY8 311 aa13.91□□□□□ -0.18
COL6A2-204ENST00000409416 RIBC1Q8N443 379 aaPredicted RBP13.91□□□□□ -0.18
COL6A2-204ENST00000409416 FAM13CQ8NE31 585 aa13.91□□□□□ -0.18
COL6A2-204ENST00000409416 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.91□□□□□ -0.18
COL6A2-204ENST00000409416 PPARGC1AQ9UBK2 798 aaKnown RBP13.91□□□□□ -0.18
COL6A2-204ENST00000409416 LOC100653049A0A140TA62 436 aa13.9□□□□□ -0.18
COL6A2-204ENST00000409416 TRIM49D1C9J1S8 452 aa13.9□□□□□ -0.18
COL6A2-204ENST00000409416 CYB561D2O14569 222 aa13.9□□□□□ -0.18
COL6A2-204ENST00000409416 KRT34O76011 436 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms