RNA–Protein interactions for RNA: ENST00000401884.5

SNED1-204, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 4,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-204ENST00000401884 SETD4Q9NVD3 440 aa18.29■□□□□ 0.52
SNED1-204ENST00000401884 DMAC2Q9NW81 257 aa18.29■□□□□ 0.52
SNED1-204ENST00000401884 ORC6Q9Y5N6 252 aa18.29■□□□□ 0.52
SNED1-204ENST00000401884 ENO4A6NNW6 628 aa18.28■□□□□ 0.52
SNED1-204ENST00000401884 FANCGO15287 622 aa18.28■□□□□ 0.52
SNED1-204ENST00000401884 DGKIO75912 1065 aa18.28■□□□□ 0.52
SNED1-204ENST00000401884 PIAS1O75925 651 aa18.28■□□□□ 0.52
SNED1-204ENST00000401884 TNFSF9P41273 254 aa18.28■□□□□ 0.52
SNED1-204ENST00000401884 MMP13P45452 471 aa18.28■□□□□ 0.52
SNED1-204ENST00000401884 RPL10AP62906 217 aaKnown RBP18.28■□□□□ 0.52
SNED1-204ENST00000401884 BST2Q10589 180 aaKnown RBP18.28■□□□□ 0.52
SNED1-204ENST00000401884 TMEM132BQ14DG7 1078 aa18.28■□□□□ 0.52
SNED1-204ENST00000401884 MTFR1Q15390 333 aa18.28■□□□□ 0.52
SNED1-204ENST00000401884 COLGALT1Q8NBJ5 622 aa18.28■□□□□ 0.52
SNED1-204ENST00000401884 CYB561D2O14569 222 aa18.28■□□□□ 0.52
SNED1-204ENST00000401884 POTEAQ6S8J7 498 aa18.28■□□□□ 0.52
SNED1-204ENST00000401884 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.28■□□□□ 0.52
SNED1-204ENST00000401884 KIRREL3Q8IZU9 778 aa18.28■□□□□ 0.52
SNED1-204ENST00000401884 SRPK1Q96SB4 655 aaKnown RBP18.28■□□□□ 0.52
SNED1-204ENST00000401884 CEP41Q9BYV8 373 aa18.28■□□□□ 0.52
SNED1-204ENST00000401884 PPP2R3BQ9Y5P8 575 aa18.28■□□□□ 0.52
SNED1-204ENST00000401884 CSPG5O95196 566 aa18.28■□□□□ 0.52
SNED1-204ENST00000401884 HMBSP08397 361 aa18.28■□□□□ 0.52
SNED1-204ENST00000401884 TCN1P20061 433 aaPredicted RBP18.28■□□□□ 0.52
SNED1-204ENST00000401884 RBL1P28749 1068 aa18.28■□□□□ 0.52
SNED1-204ENST00000401884 RPA3P35244 121 aaPredicted RBP18.28■□□□□ 0.52
SNED1-204ENST00000401884 KBTBD12Q3ZCT8 623 aa18.28■□□□□ 0.52
SNED1-204ENST00000401884 TMEM259Q4ZIN3 620 aa18.28■□□□□ 0.52
SNED1-204ENST00000401884 ADGRF2Q8IZF7 708 aa18.28■□□□□ 0.52
SNED1-204ENST00000401884 ASCC2Q9H1I8 757 aaPredicted RBP18.28■□□□□ 0.52
SNED1-204ENST00000401884 CATSPERBQ9H7T0 1116 aa18.28■□□□□ 0.52
SNED1-204ENST00000401884 JCHAINP01591 159 aa18.28■□□□□ 0.52
SNED1-204ENST00000401884 TMCO4Q5TGY1 634 aa18.28■□□□□ 0.52
SNED1-204ENST00000401884 HELQQ8TDG4 1101 aa18.28■□□□□ 0.52
SNED1-204ENST00000401884 ULK4Q96C45 1275 aa18.28■□□□□ 0.52
SNED1-204ENST00000401884 OLFM3Q96PB7 478 aa18.28■□□□□ 0.52
SNED1-204ENST00000401884 ADARB2Q9NS39 739 aaKnown RBP18.28■□□□□ 0.52
SNED1-204ENST00000401884 TMEM51Q9NW97 253 aa18.28■□□□□ 0.52
SNED1-204ENST00000401884 GIPC2Q8TF65 315 aa18.27■□□□□ 0.52
SNED1-204ENST00000401884 TSPAN17Q96FV3 270 aa18.27■□□□□ 0.52
SNED1-204ENST00000401884 KDM3BQ7LBC6 1761 aa18.27■□□□□ 0.52
SNED1-204ENST00000401884 KIF1CO43896 1103 aaKnown RBP18.27■□□□□ 0.52
SNED1-204ENST00000401884 DNAJC8O75937 253 aaPredicted RBP18.27■□□□□ 0.52
SNED1-204ENST00000401884 F9P00740 461 aa18.27■□□□□ 0.52
SNED1-204ENST00000401884 ASS1P00966 412 aaKnown RBP18.27■□□□□ 0.52
SNED1-204ENST00000401884 AMPD1P23109 780 aa18.27■□□□□ 0.52
SNED1-204ENST00000401884 C15orf59Q2T9L4 293 aaPredicted RBP18.27■□□□□ 0.52
SNED1-204ENST00000401884 LRRC15Q8TF66 581 aa18.27■□□□□ 0.52
SNED1-204ENST00000401884 LENG9Q96B70 501 aa18.27■□□□□ 0.52
SNED1-204ENST00000401884 SIX2Q9NPC8 291 aa18.27■□□□□ 0.52
SNED1-204ENST00000401884 PIH1D1Q9NWS0 290 aaKnown RBP18.27■□□□□ 0.52
SNED1-204ENST00000401884 ARHGAP26Q9UNA1 814 aa18.27■□□□□ 0.52
SNED1-204ENST00000401884 NFASCO94856 1347 aa18.27■□□□□ 0.52
SNED1-204ENST00000401884 DCDC2CA8MYV0 355 aa18.27■□□□□ 0.51
SNED1-204ENST00000401884 RALBP11234 206 aa18.27■□□□□ 0.51
SNED1-204ENST00000401884 RPL22P35268 128 aaKnown RBP18.27■□□□□ 0.51
SNED1-204ENST00000401884 KCNT2Q6UVM3 1135 aa18.27■□□□□ 0.51
SNED1-204ENST00000401884 ARHGAP18Q8N392 663 aa18.27■□□□□ 0.51
SNED1-204ENST00000401884 COL20A1Q9P218 1284 aa18.27■□□□□ 0.51
SNED1-204ENST00000401884 RIPK3Q9Y572 518 aa18.27■□□□□ 0.51
SNED1-204ENST00000401884 ACTL7BQ9Y614 415 aa18.27■□□□□ 0.51
SNED1-204ENST00000401884 SPATA31C2B4DYI2 1134 aa18.26■□□□□ 0.51
SNED1-204ENST00000401884 SHOX2O60902 331 aaPredicted RBP18.26■□□□□ 0.51
SNED1-204ENST00000401884 SERPINB3P29508 390 aa18.26■□□□□ 0.51
SNED1-204ENST00000401884 TBCCQ15814 346 aa18.26■□□□□ 0.51
SNED1-204ENST00000401884 QPCTQ16769 361 aa18.26■□□□□ 0.51
SNED1-204ENST00000401884 LINC00523Q86TU6 105 aa18.26■□□□□ 0.51
SNED1-204ENST00000401884 SCUBE1Q8IWY4 988 aa18.26■□□□□ 0.51
SNED1-204ENST00000401884 CALML6Q8TD86 181 aa18.26■□□□□ 0.51
SNED1-204ENST00000401884 TSR3Q9UJK0 312 aaKnown RBP18.26■□□□□ 0.51
SNED1-204ENST00000401884 DDNO94850 711 aaPredicted RBP18.26■□□□□ 0.51
SNED1-204ENST00000401884 ELF3P78545 371 aaPredicted RBP18.26■□□□□ 0.51
SNED1-204ENST00000401884 CEP70Q8NHQ1 597 aa18.26■□□□□ 0.51
SNED1-204ENST00000401884 APOPT1Q96IL0 206 aa18.26■□□□□ 0.51
SNED1-204ENST00000401884 BEGAINQ9BUH8 593 aa18.26■□□□□ 0.51
SNED1-204ENST00000401884 AURKCQ9UQB9 309 aa18.26■□□□□ 0.51
SNED1-204ENST00000401884 CDYLQ9Y232 598 aa18.26■□□□□ 0.51
SNED1-204ENST00000401884 KCNK1O00180 336 aa18.26■□□□□ 0.51
SNED1-204ENST00000401884 FCHO1O14526 889 aa18.26■□□□□ 0.51
SNED1-204ENST00000401884 CXCL11O14625 94 aa18.26■□□□□ 0.51
SNED1-204ENST00000401884 TIMM44O43615 452 aa18.26■□□□□ 0.51
SNED1-204ENST00000401884 ANXA9O76027 345 aa18.26■□□□□ 0.51
SNED1-204ENST00000401884 CNTFP26441 200 aa18.26■□□□□ 0.51
SNED1-204ENST00000401884 STRA8Q7Z7C7 330 aa18.26■□□□□ 0.51
SNED1-204ENST00000401884 ALLCQ8N6M5 410 aa18.26■□□□□ 0.51
SNED1-204ENST00000401884 NAF1Q96HR8 494 aaKnown RBP18.26■□□□□ 0.51
SNED1-204ENST00000401884 MYLK2Q9H1R3 596 aa18.26■□□□□ 0.51
SNED1-204ENST00000401884 R3HDM2Q9Y2K5 976 aaKnown RBP18.26■□□□□ 0.51
SNED1-204ENST00000401884 PCDHA2Q9Y5H9 948 aa18.26■□□□□ 0.51
SNED1-204ENST00000401884 MGAT5Q09328 741 aa18.26■□□□□ 0.51
SNED1-204ENST00000401884 C16orf89Q6UX73 402 aa18.26■□□□□ 0.51
SNED1-204ENST00000401884 EME1Q96AY2 570 aa18.26■□□□□ 0.51
SNED1-204ENST00000401884 SLC4A7Q9Y6M7 1214 aa18.26■□□□□ 0.51
SNED1-204ENST00000401884 UBTFL6P0CB48 400 aaPredicted RBP18.25■□□□□ 0.51
SNED1-204ENST00000401884 CPA3P15088 417 aa18.25■□□□□ 0.51
SNED1-204ENST00000401884 GRK2P25098 689 aa18.25■□□□□ 0.51
SNED1-204ENST00000401884 CYTH1Q15438 398 aa18.25■□□□□ 0.51
SNED1-204ENST00000401884 BBS12Q6ZW61 710 aa18.25■□□□□ 0.51
SNED1-204ENST00000401884 TAS2R42Q7RTR8 314 aa18.25■□□□□ 0.51
SNED1-204ENST00000401884 IFNEQ86WN2 208 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms