RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 RSAD1Q9HA92 442 aa16.06■□□□□ 0.16
CPSF7-202ENST00000394888 PIRO00625 290 aa16.05■□□□□ 0.16
CPSF7-202ENST00000394888 KRT4P19013 534 aa16.05■□□□□ 0.16
CPSF7-202ENST00000394888 ADRA1DP25100 572 aa16.05■□□□□ 0.16
CPSF7-202ENST00000394888 LMO2P25791 158 aa16.05■□□□□ 0.16
CPSF7-202ENST00000394888 TKTP29401 623 aaKnown RBP16.05■□□□□ 0.16
CPSF7-202ENST00000394888 KIZQ2M2Z5 673 aa16.05■□□□□ 0.16
CPSF7-202ENST00000394888 C9orf131Q5VYM1 1079 aa16.05■□□□□ 0.16
CPSF7-202ENST00000394888 C3orf62Q6ZUJ4 267 aa16.05■□□□□ 0.16
CPSF7-202ENST00000394888 OTOAQ7RTW8 1153 aa16.05■□□□□ 0.16
CPSF7-202ENST00000394888 RFX6Q8HWS3 928 aa16.05■□□□□ 0.16
CPSF7-202ENST00000394888 TTC13Q8NBP0 860 aa16.05■□□□□ 0.16
CPSF7-202ENST00000394888 ARRDC4Q8NCT1 418 aa16.05■□□□□ 0.16
CPSF7-202ENST00000394888 TEKT4Q8WW24 435 aa16.05■□□□□ 0.16
CPSF7-202ENST00000394888 NXF3Q9H4D5 531 aaKnown RBP16.05■□□□□ 0.16
CPSF7-202ENST00000394888 FLRT1Q9NZU1 646 aa16.05■□□□□ 0.16
CPSF7-202ENST00000394888 PDHXO00330 501 aa16.05■□□□□ 0.16
CPSF7-202ENST00000394888 EPHX2P34913 555 aa16.05■□□□□ 0.16
CPSF7-202ENST00000394888 GCLCP48506 637 aaPredicted RBP16.05■□□□□ 0.16
CPSF7-202ENST00000394888 DUSP28Q4G0W2 176 aa16.05■□□□□ 0.16
CPSF7-202ENST00000394888 FAM47EQ6ZV65 393 aa16.05■□□□□ 0.16
CPSF7-202ENST00000394888 PCGF5Q86SE9 256 aa16.05■□□□□ 0.16
CPSF7-202ENST00000394888 ACAP3Q96P50 834 aa16.05■□□□□ 0.16
CPSF7-202ENST00000394888 MYLK2Q9H1R3 596 aa16.05■□□□□ 0.16
CPSF7-202ENST00000394888 PHTF1Q9UMS5 762 aa16.05■□□□□ 0.16
CPSF7-202ENST00000394888 GNEQ9Y223 722 aaKnown RBP16.05■□□□□ 0.16
CPSF7-202ENST00000394888 NR2E3Q9Y5X4 410 aa16.05■□□□□ 0.16
CPSF7-202ENST00000394888 PDGFRAP16234 1089 aa16.05■□□□□ 0.16
CPSF7-202ENST00000394888 YARSP54577 528 aaKnown RBP16.05■□□□□ 0.16
CPSF7-202ENST00000394888 RBP5P82980 135 aa16.05■□□□□ 0.16
CPSF7-202ENST00000394888 SLC18A2Q05940 514 aa16.05■□□□□ 0.16
CPSF7-202ENST00000394888 VSIG1Q86XK7 387 aa16.05■□□□□ 0.16
CPSF7-202ENST00000394888 GPRC5AQ8NFJ5 357 aa16.05■□□□□ 0.16
CPSF7-202ENST00000394888 SLC7A6OSQ96CW6 309 aaPredicted RBP16.05■□□□□ 0.16
CPSF7-202ENST00000394888 GORASP1Q9BQQ3 440 aa16.05■□□□□ 0.16
CPSF7-202ENST00000394888 VPS37BQ9H9H4 285 aa16.05■□□□□ 0.16
CPSF7-202ENST00000394888 KBTBD13C9JR72 458 aa16.04■□□□□ 0.16
CPSF7-202ENST00000394888 I6L893 689 aaPredicted RBP16.04■□□□□ 0.16
CPSF7-202ENST00000394888 MAP3K6O95382 1288 aa16.04■□□□□ 0.16
CPSF7-202ENST00000394888 CDR1P51861 262 aa16.04■□□□□ 0.16
CPSF7-202ENST00000394888 CDH6P55285 790 aa16.04■□□□□ 0.16
CPSF7-202ENST00000394888 NR1H3Q13133 447 aa16.04■□□□□ 0.16
CPSF7-202ENST00000394888 ARTNQ5T4W7 220 aa16.04■□□□□ 0.16
CPSF7-202ENST00000394888 PPP1R21Q6ZMI0 780 aa16.04■□□□□ 0.16
CPSF7-202ENST00000394888 ZC3H18Q86VM9 953 aaKnown RBP16.04■□□□□ 0.16
CPSF7-202ENST00000394888 NT5DC4Q86YG4 428 aa16.04■□□□□ 0.16
CPSF7-202ENST00000394888 SLC44A1Q8WWI5 657 aa16.04■□□□□ 0.16
CPSF7-202ENST00000394888 NT5C1AQ9BXI3 368 aa16.04■□□□□ 0.16
CPSF7-202ENST00000394888 ECT2Q9H8V3 914 aa16.04■□□□□ 0.16
CPSF7-202ENST00000394888 SETD4Q9NVD3 440 aa16.04■□□□□ 0.16
CPSF7-202ENST00000394888 SLC45A1Q9Y2W3 748 aa16.04■□□□□ 0.16
CPSF7-202ENST00000394888 DERAQ9Y315 318 aa16.04■□□□□ 0.16
CPSF7-202ENST00000394888 MDM4O15151 490 aa16.04■□□□□ 0.16
CPSF7-202ENST00000394888 METTL18O95568 372 aa16.04■□□□□ 0.16
CPSF7-202ENST00000394888 RBL1P28749 1068 aa16.04■□□□□ 0.16
CPSF7-202ENST00000394888 STX2P32856 288 aa16.04■□□□□ 0.16
CPSF7-202ENST00000394888 SLC6A3Q01959 620 aa16.04■□□□□ 0.16
CPSF7-202ENST00000394888 TMEM62Q0P6H9 643 aa16.04■□□□□ 0.16
CPSF7-202ENST00000394888 SNAPC2Q13487 334 aa16.04■□□□□ 0.16
CPSF7-202ENST00000394888 HADHQ16836 314 aaKnown RBP16.04■□□□□ 0.16
CPSF7-202ENST00000394888 KIAA0319Q5VV43 1072 aa16.04■□□□□ 0.16
CPSF7-202ENST00000394888 C9orf57Q5W0N0 161 aa16.04■□□□□ 0.16
CPSF7-202ENST00000394888 ARHGAP17Q68EM7 881 aa16.04■□□□□ 0.16
CPSF7-202ENST00000394888 LENG1Q96BZ8 264 aaPredicted RBP16.04■□□□□ 0.16
CPSF7-202ENST00000394888 KIF12Q96FN5 646 aa16.04■□□□□ 0.16
CPSF7-202ENST00000394888 CALN1Q9BXU9 219 aa16.04■□□□□ 0.16
CPSF7-202ENST00000394888 RNF39Q9H2S5 420 aa16.04■□□□□ 0.16
CPSF7-202ENST00000394888 FAM49BQ9NUQ9 324 aa16.04■□□□□ 0.16
CPSF7-202ENST00000394888 ETNK2Q9NVF9 386 aa16.04■□□□□ 0.16
CPSF7-202ENST00000394888 CHMP2BQ9UQN3 213 aa16.04■□□□□ 0.16
CPSF7-202ENST00000394888 BCLAF3A2AJT9 711 aaKnown RBP16.04■□□□□ 0.16
CPSF7-202ENST00000394888 ZNF487B1APH4 448 aa16.04■□□□□ 0.16
CPSF7-202ENST00000394888 UGT1A9O60656 530 aa16.04■□□□□ 0.16
CPSF7-202ENST00000394888 MRPS5P82675 430 aaKnown RBP16.04■□□□□ 0.16
CPSF7-202ENST00000394888 GPR142Q7Z601 462 aa16.04■□□□□ 0.16
CPSF7-202ENST00000394888 MPP5Q8N3R9 675 aa16.04■□□□□ 0.16
CPSF7-202ENST00000394888 FAM172AQ8WUF8 416 aa16.04■□□□□ 0.16
CPSF7-202ENST00000394888 ZNF75CPQ92670 426 aaPredicted RBP16.04■□□□□ 0.16
CPSF7-202ENST00000394888 OLFM3Q96PB7 478 aa16.04■□□□□ 0.16
CPSF7-202ENST00000394888 UGT1A7Q9HAW7 530 aa16.04■□□□□ 0.16
CPSF7-202ENST00000394888 UGT1A10Q9HAW8 530 aa16.04■□□□□ 0.16
CPSF7-202ENST00000394888 UGT1A8Q9HAW9 530 aa16.04■□□□□ 0.16
CPSF7-202ENST00000394888 ASNSD1Q9NWL6 643 aa16.04■□□□□ 0.16
CPSF7-202ENST00000394888 GSRP00390 522 aa16.03■□□□□ 0.16
CPSF7-202ENST00000394888 NQO1P15559 274 aaKnown RBP16.03■□□□□ 0.16
CPSF7-202ENST00000394888 RIPK1Q13546 671 aa16.03■□□□□ 0.16
CPSF7-202ENST00000394888 CDO1Q16878 200 aa16.03■□□□□ 0.16
CPSF7-202ENST00000394888 KBTBD12Q3ZCT8 623 aa16.03■□□□□ 0.16
CPSF7-202ENST00000394888 PAQR9Q6ZVX9 377 aa16.03■□□□□ 0.16
CPSF7-202ENST00000394888 ZNF410Q86VK4 478 aa16.03■□□□□ 0.16
CPSF7-202ENST00000394888 CCDC185Q8N715 623 aa16.03■□□□□ 0.16
CPSF7-202ENST00000394888 CCDC63Q8NA47 563 aa16.03■□□□□ 0.16
CPSF7-202ENST00000394888 NLRP7Q8WX94 980 aa16.03■□□□□ 0.16
CPSF7-202ENST00000394888 SMG5Q9UPR3 1016 aaKnown RBP16.03■□□□□ 0.16
CPSF7-202ENST00000394888 FRMPD3Q5JV73 1810 aa16.03■□□□□ 0.16
CPSF7-202ENST00000394888 CHADO15335 359 aa16.03■□□□□ 0.16
CPSF7-202ENST00000394888 TSHRP16473 764 aa16.03■□□□□ 0.16
CPSF7-202ENST00000394888 HOXC8P31273 242 aa16.03■□□□□ 0.16
CPSF7-202ENST00000394888 ARL4CP56559 192 aa16.03■□□□□ 0.16
CPSF7-202ENST00000394888 PITX1P78337 314 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms