RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 TBK1Q9UHD2 729 aa9.44□□□□□ -0.9
TDP1-202ENST00000393452 TCRBV7S3A2A0A539 114 aa9.43□□□□□ -0.9
TDP1-202ENST00000393452 PTGESO14684 152 aa9.43□□□□□ -0.9
TDP1-202ENST00000393452 CPP00450 1065 aa9.43□□□□□ -0.9
TDP1-202ENST00000393452 DESP17661 470 aa9.43□□□□□ -0.9
TDP1-202ENST00000393452 WARSP23381 471 aaKnown RBP9.43□□□□□ -0.9
TDP1-202ENST00000393452 ZNF157P51786 506 aaPredicted RBP9.43□□□□□ -0.9
TDP1-202ENST00000393452 KRT81Q14533 505 aa9.43□□□□□ -0.9
TDP1-202ENST00000393452 DPYSL2Q16555 572 aa9.43□□□□□ -0.9
TDP1-202ENST00000393452 CA9Q16790 459 aa9.43□□□□□ -0.9
TDP1-202ENST00000393452 EFHC2Q5JST6 749 aa9.43□□□□□ -0.9
TDP1-202ENST00000393452 HP1BP3Q5SSJ5 553 aaPredicted RBP9.43□□□□□ -0.9
TDP1-202ENST00000393452 ZNF618Q5T7W0 954 aa9.43□□□□□ -0.9
TDP1-202ENST00000393452 SCYL2Q6P3W7 929 aa9.43□□□□□ -0.9
TDP1-202ENST00000393452 FAM228AQ86W67 206 aa9.43□□□□□ -0.9
TDP1-202ENST00000393452 IFNL1Q8IU54 200 aa9.43□□□□□ -0.9
TDP1-202ENST00000393452 SRRM1Q8IYB3 904 aaKnown RBP9.43□□□□□ -0.9
TDP1-202ENST00000393452 CCDC13Q8IYE1 715 aa9.43□□□□□ -0.9
TDP1-202ENST00000393452 OTUD6BQ8N6M0 293 aa9.43□□□□□ -0.9
TDP1-202ENST00000393452 C7orf31Q8N865 590 aa9.43□□□□□ -0.9
TDP1-202ENST00000393452 PCDH19Q8TAB3 1148 aa9.43□□□□□ -0.9
TDP1-202ENST00000393452 CLEC4CQ8WTT0 213 aa9.43□□□□□ -0.9
TDP1-202ENST00000393452 CABS1Q96KC9 395 aa9.43□□□□□ -0.9
TDP1-202ENST00000393452 TNIP3Q96KP6 325 aa9.43□□□□□ -0.9
TDP1-202ENST00000393452 PPP1R10Q96QC0 940 aaKnown RBP9.43□□□□□ -0.9
TDP1-202ENST00000393452 SNX25Q9H3E2 840 aa9.43□□□□□ -0.9
TDP1-202ENST00000393452 GOLGA2P5Q9HBQ8 144 aa9.43□□□□□ -0.9
TDP1-202ENST00000393452 SLC24A2Q9UI40 661 aa9.43□□□□□ -0.9
TDP1-202ENST00000393452 CFAP69A5D8W1 941 aa9.43□□□□□ -0.9
TDP1-202ENST00000393452 RASA4BC9J798 803 aa9.43□□□□□ -0.9
TDP1-202ENST00000393452 GOLGA8MH3BSY2 632 aa9.43□□□□□ -0.9
TDP1-202ENST00000393452 APOL1O14791 398 aa9.43□□□□□ -0.9
TDP1-202ENST00000393452 RASA4O43374 803 aa9.43□□□□□ -0.9
TDP1-202ENST00000393452 DUSP11O75319 330 aaKnown RBP9.43□□□□□ -0.9
TDP1-202ENST00000393452 BANF1O75531 89 aa9.43□□□□□ -0.9
TDP1-202ENST00000393452 AKR1A1P14550 325 aa9.43□□□□□ -0.9
TDP1-202ENST00000393452 TSHRP16473 764 aa9.43□□□□□ -0.9
TDP1-202ENST00000393452 TFE3P19532 575 aaPredicted RBP9.43□□□□□ -0.9
TDP1-202ENST00000393452 ADORA2BP29275 332 aa9.43□□□□□ -0.9
TDP1-202ENST00000393452 IFNAR2P48551 515 aa9.43□□□□□ -0.9
TDP1-202ENST00000393452 SLC18A1P54219 525 aa9.43□□□□□ -0.9
TDP1-202ENST00000393452 KCNJ11Q14654 390 aa9.43□□□□□ -0.9
TDP1-202ENST00000393452 DARS2Q6PI48 645 aaKnown RBP9.43□□□□□ -0.9
TDP1-202ENST00000393452 ZC3H18Q86VM9 953 aaKnown RBP9.43□□□□□ -0.9
TDP1-202ENST00000393452 ADGRF2Q8IZF7 708 aa9.43□□□□□ -0.9
TDP1-202ENST00000393452 ATP11CQ8NB49 1132 aa9.43□□□□□ -0.9
TDP1-202ENST00000393452 SLC2A14Q8TDB8 520 aa9.43□□□□□ -0.9
TDP1-202ENST00000393452 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.43□□□□□ -0.9
TDP1-202ENST00000393452 CKAP2Q8WWK9 683 aa9.43□□□□□ -0.9
TDP1-202ENST00000393452 PPM1EQ8WY54 764 aa9.43□□□□□ -0.9
TDP1-202ENST00000393452 HNRNPABQ99729 332 aaKnown RBP9.43□□□□□ -0.9
TDP1-202ENST00000393452 DNAI2Q9GZS0 605 aa9.43□□□□□ -0.9
TDP1-202ENST00000393452 VPS37BQ9H9H4 285 aa9.43□□□□□ -0.9
TDP1-202ENST00000393452 GPATCH2LQ9NWQ4 482 aa9.43□□□□□ -0.9
TDP1-202ENST00000393452 RABGEF1Q9UJ41 708 aa9.43□□□□□ -0.9
TDP1-202ENST00000393452 BCLAF3A2AJT9 711 aaKnown RBP9.42□□□□□ -0.9
TDP1-202ENST00000393452 XPO1O14980 1071 aaKnown RBP9.42□□□□□ -0.9
TDP1-202ENST00000393452 CHADO15335 359 aa9.42□□□□□ -0.9
TDP1-202ENST00000393452 KPNA6O60684 536 aa9.42□□□□□ -0.9
TDP1-202ENST00000393452 HUS1O60921 280 aa9.42□□□□□ -0.9
TDP1-202ENST00000393452 FSBPO95073 299 aa9.42□□□□□ -0.9
TDP1-202ENST00000393452 TKTP29401 623 aaKnown RBP9.42□□□□□ -0.9
TDP1-202ENST00000393452 L1CAMP32004 1257 aa9.42□□□□□ -0.9
TDP1-202ENST00000393452 NRLP54845 237 aa9.42□□□□□ -0.9
TDP1-202ENST00000393452 BCAR1P56945 870 aa9.42□□□□□ -0.9
TDP1-202ENST00000393452 INHBEP58166 350 aa9.42□□□□□ -0.9
TDP1-202ENST00000393452 RNASELQ05823 741 aaKnown RBP9.42□□□□□ -0.9
TDP1-202ENST00000393452 ITIH4Q14624 930 aa9.42□□□□□ -0.9
TDP1-202ENST00000393452 LRRC14Q15048 493 aa9.42□□□□□ -0.9
TDP1-202ENST00000393452 TMED2Q15363 201 aa9.42□□□□□ -0.9
TDP1-202ENST00000393452 TWF2Q6IBS0 349 aaKnown RBP9.42□□□□□ -0.9
TDP1-202ENST00000393452 OSTM1Q86WC4 334 aa9.42□□□□□ -0.9
TDP1-202ENST00000393452 PDIK1LQ8N165 341 aa9.42□□□□□ -0.9
TDP1-202ENST00000393452 B3GALNT2Q8NCR0 500 aa9.42□□□□□ -0.9
TDP1-202ENST00000393452 PYROXD1Q8WU10 500 aa9.42□□□□□ -0.9
TDP1-202ENST00000393452 SGSM3Q96HU1 749 aa9.42□□□□□ -0.9
TDP1-202ENST00000393452 DHRS4Q9BTZ2 278 aa9.42□□□□□ -0.9
TDP1-202ENST00000393452 OSBPL7Q9BZF2 842 aa9.42□□□□□ -0.9
TDP1-202ENST00000393452 KCNK9Q9NPC2 374 aa9.42□□□□□ -0.9
TDP1-202ENST00000393452 TMEM51Q9NW97 253 aa9.42□□□□□ -0.9
TDP1-202ENST00000393452 MTMR10Q9NXD2 777 aa9.42□□□□□ -0.9
TDP1-202ENST00000393452 SENP1Q9P0U3 644 aa9.42□□□□□ -0.9
TDP1-202ENST00000393452 XPO7Q9UIA9 1087 aaKnown RBP9.42□□□□□ -0.9
TDP1-202ENST00000393452 MYADML2A6NDP7 307 aa9.42□□□□□ -0.9
TDP1-202ENST00000393452 GABRDO14764 452 aa9.42□□□□□ -0.9
TDP1-202ENST00000393452 TNPO2O14787 897 aaKnown RBP9.42□□□□□ -0.9
TDP1-202ENST00000393452 PHBP35232 272 aa9.42□□□□□ -0.9
TDP1-202ENST00000393452 MAGEA6P43360 314 aa9.42□□□□□ -0.9
TDP1-202ENST00000393452 BASP1P80723 227 aaKnown RBP9.42□□□□□ -0.9
TDP1-202ENST00000393452 MRPS6P82932 125 aaKnown RBP9.42□□□□□ -0.9
TDP1-202ENST00000393452 EFHC1Q5JVL4 640 aa9.42□□□□□ -0.9
TDP1-202ENST00000393452 C1orf228Q6PIY5 440 aa9.42□□□□□ -0.9
TDP1-202ENST00000393452 PPP1R21Q6ZMI0 780 aa9.42□□□□□ -0.9
TDP1-202ENST00000393452 ARHGEF18Q6ZSZ5 1173 aa9.42□□□□□ -0.9
TDP1-202ENST00000393452 STRADAQ7RTN6 431 aa9.42□□□□□ -0.9
TDP1-202ENST00000393452 SAPCD2Q86UD0 394 aa9.42□□□□□ -0.9
TDP1-202ENST00000393452 ANKMY2Q8IV38 441 aa9.42□□□□□ -0.9
TDP1-202ENST00000393452 FUKQ8N0W3 1084 aa9.42□□□□□ -0.9
TDP1-202ENST00000393452 CCDC197Q8NCU1 140 aa9.42□□□□□ -0.9
TDP1-202ENST00000393452 GSTCDQ8NEC7 633 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms