RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 ZRANB3Q5FWF4 1079 aa15.19■□□□□ 0.02
CCDC50-201ENST00000392455 S100ZQ8WXG8 99 aa15.19■□□□□ 0.02
CCDC50-201ENST00000392455 RBM15Q96T37 977 aaKnown RBP eCLIP15.19■□□□□ 0.02
CCDC50-201ENST00000392455 EMSYQ7Z589 1322 aa15.19■□□□□ 0.02
CCDC50-201ENST00000392455 C15orf38-AP3S2A0A0A6YYH1 394 aa15.19■□□□□ 0.02
CCDC50-201ENST00000392455 ATP9BO43861 1147 aa15.19■□□□□ 0.02
CCDC50-201ENST00000392455 DMPKQ09013 629 aa15.19■□□□□ 0.02
CCDC50-201ENST00000392455 MAPK11Q15759 364 aa15.19■□□□□ 0.02
CCDC50-201ENST00000392455 RFX8Q6ZV50 586 aa15.19■□□□□ 0.02
CCDC50-201ENST00000392455 ARPINQ7Z6K5 226 aa15.19■□□□□ 0.02
CCDC50-201ENST00000392455 DRG1Q9Y295 367 aaKnown RBP15.19■□□□□ 0.02
CCDC50-201ENST00000392455 TRIM43BA6NCK2 446 aa15.19■□□□□ 0.02
CCDC50-201ENST00000392455 KPNA5O15131 536 aa15.19■□□□□ 0.02
CCDC50-201ENST00000392455 HSMCR30P0CW71 290 aa15.19■□□□□ 0.02
CCDC50-201ENST00000392455 USP33Q8TEY7 942 aa15.19■□□□□ 0.02
CCDC50-201ENST00000392455 SNAPC5O75971 98 aa15.18■□□□□ 0.02
CCDC50-201ENST00000392455 CSNK2BP67870 215 aa15.18■□□□□ 0.02
CCDC50-201ENST00000392455 TOP3AQ13472 1001 aaPredicted RBP15.18■□□□□ 0.02
CCDC50-201ENST00000392455 MSANTD1Q6ZTZ1 278 aa15.18■□□□□ 0.02
CCDC50-201ENST00000392455 ATG16L2Q8NAA4 619 aa15.18■□□□□ 0.02
CCDC50-201ENST00000392455 RNF181Q9P0P0 153 aa15.18■□□□□ 0.02
CCDC50-201ENST00000392455 BTBD7Q9P203 1132 aa15.18■□□□□ 0.02
CCDC50-201ENST00000392455 TUBA4AP68366 448 aa15.18■□□□□ 0.02
CCDC50-201ENST00000392455 RPTNQ6XPR3 784 aa15.18■□□□□ 0.02
CCDC50-201ENST00000392455 C1orf54Q8WWF1 131 aa15.18■□□□□ 0.02
CCDC50-201ENST00000392455 CORO2BQ9UQ03 480 aa15.18■□□□□ 0.02
CCDC50-201ENST00000392455 RHOBTB3O94955 611 aa15.18■□□□□ 0.02
CCDC50-201ENST00000392455 CCDC3Q9BQI4 270 aa15.18■□□□□ 0.02
CCDC50-201ENST00000392455 ZCCHC11Q5TAX3 1644 aaKnown RBP15.18■□□□□ 0.02
CCDC50-201ENST00000392455 ROBO2Q9HCK4 1378 aa15.18■□□□□ 0.02
CCDC50-201ENST00000392455 SNUPNO95149 360 aaKnown RBP15.18■□□□□ 0.02
CCDC50-201ENST00000392455 TCEA2Q15560 299 aa15.18■□□□□ 0.02
CCDC50-201ENST00000392455 SPHKAPQ2M3C7 1700 aa15.18■□□□□ 0.02
CCDC50-201ENST00000392455 MTA3Q9BTC8 594 aa15.18■□□□□ 0.02
CCDC50-201ENST00000392455 TMCO1Q9UM00 188 aa15.18■□□□□ 0.02
CCDC50-201ENST00000392455 NEU2Q9Y3R4 380 aa15.18■□□□□ 0.02
CCDC50-201ENST00000392455 TRIM49D1C9J1S8 452 aa15.18■□□□□ 0.02
CCDC50-201ENST00000392455 SLITRK1Q96PX8 696 aa15.18■□□□□ 0.02
CCDC50-201ENST00000392455 RNF112Q9ULX5 631 aa15.18■□□□□ 0.02
CCDC50-201ENST00000392455 PADI4Q9UM07 663 aa15.18■□□□□ 0.02
CCDC50-201ENST00000392455 KMOO15229 486 aa15.18■□□□□ 0.02
CCDC50-201ENST00000392455 RPS6KA4O75676 772 aa15.18■□□□□ 0.02
CCDC50-201ENST00000392455 EFR3AQ14156 821 aa15.18■□□□□ 0.02
CCDC50-201ENST00000392455 OTOAQ7RTW8 1153 aa15.18■□□□□ 0.02
CCDC50-201ENST00000392455 SEC16BQ96JE7 1060 aa15.18■□□□□ 0.02
CCDC50-201ENST00000392455 A0A087X0T9 212 aa15.17■□□□□ 0.02
CCDC50-201ENST00000392455 HIST1H2ABP04908 130 aa15.17■□□□□ 0.02
CCDC50-201ENST00000392455 FASP25445 335 aa15.17■□□□□ 0.02
CCDC50-201ENST00000392455 HPCAL1P37235 193 aa15.17■□□□□ 0.02
CCDC50-201ENST00000392455 SLC29A2Q14542 456 aa15.17■□□□□ 0.02
CCDC50-201ENST00000392455 HIST3H2AQ7L7L0 130 aa15.17■□□□□ 0.02
CCDC50-201ENST00000392455 IFNEQ86WN2 208 aa15.17■□□□□ 0.02
CCDC50-201ENST00000392455 ERO1BQ86YB8 467 aa15.17■□□□□ 0.02
CCDC50-201ENST00000392455 UBASH3BQ8TF42 649 aa15.17■□□□□ 0.02
CCDC50-201ENST00000392455 HIST1H2ACQ93077 130 aa15.17■□□□□ 0.02
CCDC50-201ENST00000392455 B3GALT6Q96L58 329 aa15.17■□□□□ 0.02
CCDC50-201ENST00000392455 NPHP3-ACAD11A0A0J9YXS1 232 aa15.17■□□□□ 0.02
CCDC50-201ENST00000392455 AP3D1O14617 1153 aa15.17■□□□□ 0.02
CCDC50-201ENST00000392455 ZBTB7AO95365 584 aa15.17■□□□□ 0.02
CCDC50-201ENST00000392455 CDC16Q13042 620 aa15.17■□□□□ 0.02
CCDC50-201ENST00000392455 ZSWIM7Q19AV6 140 aa15.17■□□□□ 0.02
CCDC50-201ENST00000392455 MARK2Q7KZI7 788 aaKnown RBP15.17■□□□□ 0.02
CCDC50-201ENST00000392455 CLHC1Q8NHS4 586 aa15.17■□□□□ 0.02
CCDC50-201ENST00000392455 C1QTNF7Q9BXJ2 289 aa15.17■□□□□ 0.02
CCDC50-201ENST00000392455 MARK1Q9P0L2 795 aa15.17■□□□□ 0.02
CCDC50-201ENST00000392455 RBP1P09455 135 aa15.17■□□□□ 0.02
CCDC50-201ENST00000392455 ARHGAP28Q9P2N2 729 aa15.17■□□□□ 0.02
CCDC50-201ENST00000392455 NUDT2P50583 147 aa15.17■□□□□ 0.02
CCDC50-201ENST00000392455 RBP5P82980 135 aa15.17■□□□□ 0.02
CCDC50-201ENST00000392455 ATP13A5Q4VNC0 1218 aa15.17■□□□□ 0.02
CCDC50-201ENST00000392455 ZNF671Q8TAW3 534 aa15.17■□□□□ 0.02
CCDC50-201ENST00000392455 E2F7Q96AV8 911 aa15.17■□□□□ 0.02
CCDC50-201ENST00000392455 CRLS1Q9UJA2 301 aa15.17■□□□□ 0.02
CCDC50-201ENST00000392455 B2RBV5 119 aa15.17■□□□□ 0.02
CCDC50-201ENST00000392455 AP3S2P59780 193 aa15.17■□□□□ 0.02
CCDC50-201ENST00000392455 TTC27Q6P3X3 843 aa15.17■□□□□ 0.02
CCDC50-201ENST00000392455 ASB2Q96Q27 587 aa15.17■□□□□ 0.02
CCDC50-201ENST00000392455 JPH1Q9HDC5 661 aaPredicted RBP15.17■□□□□ 0.02
CCDC50-201ENST00000392455 C8orf4Q9NR00 106 aa15.17■□□□□ 0.02
CCDC50-201ENST00000392455 DPP7Q9UHL4 492 aa15.17■□□□□ 0.02
CCDC50-201ENST00000392455 PIN4Q9Y237 131 aaKnown RBP15.17■□□□□ 0.02
CCDC50-201ENST00000392455 FAM92AA1XBS5 289 aa15.17■□□□□ 0.02
CCDC50-201ENST00000392455 H7C1W4 665 aa15.17■□□□□ 0.02
CCDC50-201ENST00000392455 O00370 1275 aa15.17■□□□□ 0.02
CCDC50-201ENST00000392455 SKAP2O75563 359 aaPredicted RBP15.17■□□□□ 0.02
CCDC50-201ENST00000392455 ATP6V1B1P15313 513 aa15.17■□□□□ 0.02
CCDC50-201ENST00000392455 EPB42P16452 691 aa15.17■□□□□ 0.02
CCDC50-201ENST00000392455 CCDC153Q494R4 210 aa15.17■□□□□ 0.02
CCDC50-201ENST00000392455 UXS1Q8NBZ7 420 aa15.17■□□□□ 0.02
CCDC50-201ENST00000392455 RAET1EQ8TD07 263 aa15.17■□□□□ 0.02
CCDC50-201ENST00000392455 ZCCHC2Q9C0B9 1178 aaKnown RBP15.17■□□□□ 0.02
CCDC50-201ENST00000392455 RAB6BQ9NRW1 208 aa15.17■□□□□ 0.02
CCDC50-201ENST00000392455 CRYL1Q9Y2S2 319 aa15.17■□□□□ 0.02
CCDC50-201ENST00000392455 POLR1AO95602 1720 aaPredicted RBP15.17■□□□□ 0.02
CCDC50-201ENST00000392455 HS6ST1O60243 411 aa15.17■□□□□ 0.02
CCDC50-201ENST00000392455 CCNG1P51959 295 aa15.17■□□□□ 0.02
CCDC50-201ENST00000392455 BNC2Q6ZN30 1099 aaPredicted RBP15.17■□□□□ 0.02
CCDC50-201ENST00000392455 STX16-NPEPL1H3BU86 382 aa15.16■□□□□ 0.02
CCDC50-201ENST00000392455 SNAP23O00161 211 aa15.16■□□□□ 0.02
CCDC50-201ENST00000392455 STX16O14662 325 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 138.3 ms