RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 TRIM29Q14134 588 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 ARHGAP44Q17R89 818 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 HS1BP3Q53T59 392 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 MAP1SQ66K74 1059 aaPredicted RBP2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 RAPH1Q70E73 1250 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 ARID3BQ8IVW6 561 aaPredicted RBP2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 FIBCD1Q8N539 461 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 MFSD2AQ8NA29 543 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 EDAQ92838 391 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 DTNBP1Q96EV8 351 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 IMPG2Q9BZV3 1241 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 POFUT1Q9H488 388 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 IPPKQ9H8X2 491 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 KCNMB3Q9NPA1 279 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 VPS45Q9NRW7 570 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 AASSQ9UDR5 926 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 CHTOPQ9Y3Y2 248 aaKnown RBP2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 KTN1Q86UP2 1357 aaKnown RBP2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 ALPK3Q96L96 1907 aa2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 NFIBO00712 420 aa2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 HEXIM1O94992 359 aaKnown RBP2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 KLKB1P03952 638 aa2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 OPN1MWP04001 364 aa2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 OPN1MW2P0DN77 364 aa2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 OPN1MW3P0DN78 364 aa2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 ATP6V1B1P15313 513 aa2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 SPEM2Q0P670 501 aa2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 BOP1Q14137 746 aaKnown RBP2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 TBC1D25Q3MII6 688 aa2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 SLC39A12Q504Y0 691 aa2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 ARSJQ5FYB0 599 aaPredicted RBP2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 C1orf228Q6PIY5 440 aa2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 POC1BQ8TC44 478 aa2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 USP6NLQ92738 828 aa2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 LRIG1Q96JA1 1093 aa2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 TMEM237Q96Q45 408 aa2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 MPHOSPH8Q99549 860 aa2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 CDC6Q99741 560 aa2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 FUCA2Q9BTY2 467 aa2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 EGLN1Q9GZT9 426 aa2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 TAOK3Q9H2K8 898 aa2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 NOD2Q9HC29 1040 aa2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 TM9SF3Q9HD45 589 aa2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 MID1IP1Q9NPA3 183 aa2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 GDE1Q9NZC3 331 aa2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 CA14Q9ULX7 337 aa2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 TNS2Q63HR2 1409 aa2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 E9PLN8 166 aa2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 POLRMTO00411 1230 aaKnown RBP2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 HNRNPDLO14979 420 aaKnown RBP2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 COL1A1P02452 1464 aaPredicted RBP2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 TMEM253P0C7T8 217 aa2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 PIM1P11309 404 aaPredicted RBP2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 ADRA2CP18825 462 aa2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 CALRP27797 417 aaKnown RBP2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 PCSK1P29120 753 aa2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 ADSLP30566 484 aaPredicted RBP2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 LSP1P33241 339 aa2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 CD68P34810 354 aaPredicted RBP2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 GRK3P35626 688 aa2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 GPR15P49685 360 aa2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 HDGFP51858 240 aaKnown RBP2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 INHBCP55103 352 aa2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 ANTXR2P58335 489 aa2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 CTBSQ01459 385 aa2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 MALLQ13021 153 aa2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 SF3B3Q15393 1217 aaKnown RBP2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 SLC44A2Q8IWA5 706 aaPredicted RBP2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 LILRA2Q8N149 483 aa2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 PCSK9Q8NBP7 692 aaKnown RBP2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 GOT1L1Q8NHS2 421 aaPredicted RBP2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 ZNF671Q8TAW3 534 aa2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 KIF1BPQ96EK5 621 aa2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 SNX22Q96L94 193 aa2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 VKORC1Q9BQB6 163 aa2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 LMCD1Q9NZU5 365 aa2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 KLHL9Q9P2J3 617 aa2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 IPO11Q9UI26 975 aaKnown RBP2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 NIP7Q9Y221 180 aaKnown RBP eCLIP2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 SLC4A7Q9Y6M7 1214 aa2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 GAGE10A6NGK3 116 aa2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 MARCH11A6NNE9 402 aa2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 TMEM232C9JQI7 657 aa2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 RECQL5O94762 991 aaPredicted RBP2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 TFRCP02786 760 aaKnown RBP2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 TPP2P29144 1249 aaPredicted RBP2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 CACNB3P54284 484 aa2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 ABHD18Q0P651 414 aa2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 GRIK3Q13003 919 aa2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 EIF4A2Q14240 407 aaKnown RBP2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 KCNT1Q5JUK3 1230 aa2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 PRR31Q5SQ13 230 aa2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 STXBP5Q5T5C0 1151 aa2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 DARS2Q6PI48 645 aaKnown RBP2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 CCDC149Q6ZUS6 474 aa2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 LINC00346Q8IVM7 164 aa2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 CMTR1Q8N1G2 835 aaKnown RBP2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 CCDC24Q8N4L8 307 aa2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 AFAP1L1Q8TED9 768 aa2.07□□□□□ -2.08
SMARCAD1-202ENST00000359052 AP1M1Q9BXS5 423 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms