RNA–Protein interactions for RNA: ENST00000342711.5

CDC42BPG-201, Transcript of CDC42 binding protein kinase gamma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPG, Length 5,742 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPG-201ENST00000342711 RDM1Q8NG50 284 aa17.03■□□□□ 0.32
CDC42BPG-201ENST00000342711 SLC20A1Q8WUM9 679 aa17.03■□□□□ 0.32
CDC42BPG-201ENST00000342711 ATG4CQ96DT6 458 aa17.03■□□□□ 0.32
CDC42BPG-201ENST00000342711 CBWD1Q9BRT8 395 aa17.03■□□□□ 0.32
CDC42BPG-201ENST00000342711 PIF1Q9H611 641 aa17.03■□□□□ 0.32
CDC42BPG-201ENST00000342711 DMGDHQ9UI17 866 aaKnown RBP17.03■□□□□ 0.32
CDC42BPG-201ENST00000342711 UBQLN1Q9UMX0 589 aaKnown RBP17.03■□□□□ 0.32
CDC42BPG-201ENST00000342711 INO80Q9ULG1 1556 aaPredicted RBP17.03■□□□□ 0.32
CDC42BPG-201ENST00000342711 VDRP11473 427 aa17.03■□□□□ 0.32
CDC42BPG-201ENST00000342711 CPA3P15088 417 aa17.03■□□□□ 0.32
CDC42BPG-201ENST00000342711 RRM1P23921 792 aa17.03■□□□□ 0.32
CDC42BPG-201ENST00000342711 ALDH1A3P47895 512 aa17.03■□□□□ 0.32
CDC42BPG-201ENST00000342711 NUMBP49757 651 aa17.03■□□□□ 0.32
CDC42BPG-201ENST00000342711 KHDRBS2Q5VWX1 349 aaKnown RBP17.03■□□□□ 0.32
CDC42BPG-201ENST00000342711 FAM180AQ6UWF9 173 aa17.03■□□□□ 0.32
CDC42BPG-201ENST00000342711 C10orf53Q8N6V4 93 aa17.03■□□□□ 0.32
CDC42BPG-201ENST00000342711 GPRASP2Q96D09 838 aa17.03■□□□□ 0.32
CDC42BPG-201ENST00000342711 KANSL1LA0AUZ9 987 aa17.02■□□□□ 0.32
CDC42BPG-201ENST00000342711 TM9SF1O15321 606 aa17.02■□□□□ 0.32
CDC42BPG-201ENST00000342711 ODC1P11926 461 aa17.02■□□□□ 0.32
CDC42BPG-201ENST00000342711 GIT2Q14161 759 aa17.02■□□□□ 0.32
CDC42BPG-201ENST00000342711 ZBTB49Q6ZSB9 765 aa17.02■□□□□ 0.32
CDC42BPG-201ENST00000342711 DNAAF5Q86Y56 855 aa17.02■□□□□ 0.32
CDC42BPG-201ENST00000342711 CAVIN3Q969G5 261 aa17.02■□□□□ 0.32
CDC42BPG-201ENST00000342711 TMEM39BQ9GZU3 492 aa17.02■□□□□ 0.32
CDC42BPG-201ENST00000342711 CTNNAL1Q9UBT7 734 aa17.02■□□□□ 0.32
CDC42BPG-201ENST00000342711 DDX20Q9UHI6 824 aaKnown RBP17.02■□□□□ 0.32
CDC42BPG-201ENST00000342711 NPM3O75607 178 aaKnown RBP17.02■□□□□ 0.32
CDC42BPG-201ENST00000342711 RPS7P62081 194 aaKnown RBP17.02■□□□□ 0.32
CDC42BPG-201ENST00000342711 SNAPC2Q13487 334 aa17.02■□□□□ 0.32
CDC42BPG-201ENST00000342711 TAF1CQ15572 869 aaPredicted RBP17.02■□□□□ 0.32
CDC42BPG-201ENST00000342711 XRRA1Q6P2D8 792 aa17.02■□□□□ 0.32
CDC42BPG-201ENST00000342711 CHST13Q8NET6 341 aa17.02■□□□□ 0.32
CDC42BPG-201ENST00000342711 USP18Q9UMW8 372 aa17.02■□□□□ 0.32
CDC42BPG-201ENST00000342711 USP31Q70CQ4 1352 aa17.02■□□□□ 0.32
CDC42BPG-201ENST00000342711 TERB1Q8NA31 727 aa17.02■□□□□ 0.32
CDC42BPG-201ENST00000342711 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.02■□□□□ 0.32
CDC42BPG-201ENST00000342711 TROAPQ12815 778 aa17.02■□□□□ 0.31
CDC42BPG-201ENST00000342711 KRT78Q8N1N4 520 aa17.02■□□□□ 0.31
CDC42BPG-201ENST00000342711 TMEM79Q9BSE2 394 aa17.02■□□□□ 0.31
CDC42BPG-201ENST00000342711 FICDQ9BVA6 458 aa17.02■□□□□ 0.31
CDC42BPG-201ENST00000342711 TUBGCP4Q9UGJ1 667 aa17.02■□□□□ 0.31
CDC42BPG-201ENST00000342711 DIP2CQ9Y2E4 1556 aa17.02■□□□□ 0.31
CDC42BPG-201ENST00000342711 F8VZ95 297 aa17.01■□□□□ 0.31
CDC42BPG-201ENST00000342711 SLC2A3P11169 496 aa17.01■□□□□ 0.31
CDC42BPG-201ENST00000342711 CNTFP26441 200 aa17.01■□□□□ 0.31
CDC42BPG-201ENST00000342711 MAPK1P28482 360 aa17.01■□□□□ 0.31
CDC42BPG-201ENST00000342711 TRAF2Q12933 501 aa17.01■□□□□ 0.31
CDC42BPG-201ENST00000342711 CSHL1Q14406 222 aa17.01■□□□□ 0.31
CDC42BPG-201ENST00000342711 ANGEL2Q5VTE6 544 aaKnown RBP17.01■□□□□ 0.31
CDC42BPG-201ENST00000342711 SLC24A2Q9UI40 661 aa17.01■□□□□ 0.31
CDC42BPG-201ENST00000342711 TMCC3Q9ULS5 477 aa17.01■□□□□ 0.31
CDC42BPG-201ENST00000342711 OGTO15294 1046 aa17.01■□□□□ 0.31
CDC42BPG-201ENST00000342711 SLC25A27O95847 323 aa17.01■□□□□ 0.31
CDC42BPG-201ENST00000342711 RFX3P48380 749 aa17.01■□□□□ 0.31
CDC42BPG-201ENST00000342711 KRR1Q13601 381 aaKnown RBP17.01■□□□□ 0.31
CDC42BPG-201ENST00000342711 DEFB107AQ8IZN7 70 aa17.01■□□□□ 0.31
CDC42BPG-201ENST00000342711 OR8H2Q8N162 312 aa17.01■□□□□ 0.31
CDC42BPG-201ENST00000342711 KCTD14Q9BQ13 255 aaPredicted RBP17.01■□□□□ 0.31
CDC42BPG-201ENST00000342711 NAALADL1Q9UQQ1 740 aa17.01■□□□□ 0.31
CDC42BPG-201ENST00000342711 A0A0A6YYK5 440 aaPredicted RBP17.01■□□□□ 0.31
CDC42BPG-201ENST00000342711 SAC3D1A6NKF1 404 aa17.01■□□□□ 0.31
CDC42BPG-201ENST00000342711 SNTNA6NMZ2 147 aa17.01■□□□□ 0.31
CDC42BPG-201ENST00000342711 KBTBD13C9JR72 458 aa17.01■□□□□ 0.31
CDC42BPG-201ENST00000342711 PIK3CDO00329 1044 aa17.01■□□□□ 0.31
CDC42BPG-201ENST00000342711 FKBP6O75344 327 aa17.01■□□□□ 0.31
CDC42BPG-201ENST00000342711 PARNO95453 639 aaKnown RBP17.01■□□□□ 0.31
CDC42BPG-201ENST00000342711 TOB1P50616 345 aaPredicted RBP17.01■□□□□ 0.31
CDC42BPG-201ENST00000342711 SCUBE2Q9NQ36 999 aa17.01■□□□□ 0.31
CDC42BPG-201ENST00000342711 NMRK1Q9NWW6 199 aa17.01■□□□□ 0.31
CDC42BPG-201ENST00000342711 ARHGAP20Q9P2F6 1191 aa17.01■□□□□ 0.31
CDC42BPG-201ENST00000342711 TSC22D2O75157 780 aa17.01■□□□□ 0.31
CDC42BPG-201ENST00000342711 RFX5P48382 616 aaPredicted RBP17.01■□□□□ 0.31
CDC42BPG-201ENST00000342711 FIGNQ5HY92 759 aa17.01■□□□□ 0.31
CDC42BPG-201ENST00000342711 TIGD7Q6NT04 549 aaPredicted RBP17.01■□□□□ 0.31
CDC42BPG-201ENST00000342711 EXD1Q8NHP7 514 aa17.01■□□□□ 0.31
CDC42BPG-201ENST00000342711 PPP1R10Q96QC0 940 aaKnown RBP17.01■□□□□ 0.31
CDC42BPG-201ENST00000342711 MRPS26Q9BYN8 205 aaKnown RBP17.01■□□□□ 0.31
CDC42BPG-201ENST00000342711 PROSCO94903 275 aa17.01■□□□□ 0.31
CDC42BPG-201ENST00000342711 HSMCR30P0CW71 290 aa17.01■□□□□ 0.31
CDC42BPG-201ENST00000342711 SLC11A2P49281 568 aa17.01■□□□□ 0.31
CDC42BPG-201ENST00000342711 SKIV2LQ15477 1246 aaKnown RBP17.01■□□□□ 0.31
CDC42BPG-201ENST00000342711 CCNG2Q16589 344 aa17.01■□□□□ 0.31
CDC42BPG-201ENST00000342711 ARMCX4Q5H9R4 360 aa17.01■□□□□ 0.31
CDC42BPG-201ENST00000342711 ARMC6Q6NXE6 501 aa17.01■□□□□ 0.31
CDC42BPG-201ENST00000342711 ERAP2Q6P179 960 aa17.01■□□□□ 0.31
CDC42BPG-201ENST00000342711 MYO1HQ8N1T3 1032 aa17.01■□□□□ 0.31
CDC42BPG-201ENST00000342711 UNKQ9C0B0 810 aaKnown RBP17.01■□□□□ 0.31
CDC42BPG-201ENST00000342711 HPSEQ9Y251 543 aa17.01■□□□□ 0.31
CDC42BPG-201ENST00000342711 RRN3P2A6NIE6 340 aa17■□□□□ 0.31
CDC42BPG-201ENST00000342711 PDZK1P1A8MUH7 402 aa17■□□□□ 0.31
CDC42BPG-201ENST00000342711 SEMA4AQ9H3S1 761 aa17■□□□□ 0.31
CDC42BPG-201ENST00000342711 PRG3Q9Y2Y8 225 aaPredicted RBP17■□□□□ 0.31
CDC42BPG-201ENST00000342711 GZMAP12544 262 aa17■□□□□ 0.31
CDC42BPG-201ENST00000342711 NCKAP1LP55160 1127 aa17■□□□□ 0.31
CDC42BPG-201ENST00000342711 AGKQ53H12 422 aa17■□□□□ 0.31
CDC42BPG-201ENST00000342711 CATSPER2Q96P56 530 aa17■□□□□ 0.31
CDC42BPG-201ENST00000342711 GPAMQ9HCL2 828 aa17■□□□□ 0.31
CDC42BPG-201ENST00000342711 INTS13Q9NVM9 706 aa17■□□□□ 0.31
CDC42BPG-201ENST00000342711 AP4E1Q9UPM8 1137 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms